Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
282.6 | 357 | 306 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
p125004 | no NCBI prot ID | no annotation | VI_01271 | Clostridia_gi_548190329 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p175207 | no NCBI prot ID | no annotation | VI_01280 | Clostridia_gi_153930785_3101670_3140229 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
p38130 | no NCBI prot ID | no annotation | VI_05808 | Clostridia_gi_484142200 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
NC_029022_p16 | YP_009219382.1 | replisome organizer | NC_029022 | Clostridium phage phiCT9441A | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae. |
NC_029004_p12 | YP_009217908.1 | replisome organizer | NC_029004 | Clostridium phage phiCT453B | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae. |
p213983 | no NCBI prot ID | no annotation | VI_05803 | Clostridia_gi_429244820 | Viruses. |
NC_030909_p45 | YP_009273727.1 | hypothetical protein | NC_030909 | Pseudomonas phage YMC11/07/P54_PAE_BP | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
JX403939_p27 | AFQ22052.1 | hypothetical protein | JX403939 | Pseudomonas phage YMC/01/01/P52_PAE_BP | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
p122800 | no NCBI prot ID | no annotation | VI_05802 | Clostridia_gi_483046904_0_43059 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p398328 | no NCBI prot ID | no annotation | VI_01241 | Clostridia_gi_547790224 | Viruses. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_37910 | 2 | no annotation | unknown function | 2 | 0 | 1000 |
phrog_11376 | 9 | no annotation | unknown function | 2 | 7.88E-13 | 3.23 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_1163 | no annotation | unknown function | 99.9 | 1.2E-29 | 4-235 / 1-219 |
phrog_11769 | no annotation | unknown function | 99.9 | 1.5E-29 | 5-132 / 2-129 |
phrog_16167 | replication initiation protein | DNA, RNA and nucleotide metabolism | 94.7 | 0.0023 | 180-250 / 179-244 |
phrog_16304 | no annotation | unknown function | 94.2 | 0.0046 | 192-279 / 140-219 |
phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 98.5 | 6.6E-11 | 4-105 / 2-97 |
phrog_19658 | replication initiation protein | DNA, RNA and nucleotide metabolism | 99.9 | 1.8E-31 | 32-303 / 19-266 |
phrog_20981 | no annotation | unknown function | 91.3 | 0.037 | 7-234 / 1-221 |
phrog_21423 | no annotation | unknown function | 93.9 | 0.0061 | 5-141 / 1-140 |
phrog_21472 | no annotation | unknown function | 97.8 | 3.3E-08 | 179-271 / 170-274 |
phrog_22470 | replication protein | DNA, RNA and nucleotide metabolism | 99.9 | 2.1E-27 | 162-273 / 204-340 |
phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 92.1 | 0.024 | 7-137 / 1-132 |
phrog_24933 | no annotation | unknown function | 95.7 | 0.00034 | 178-273 / 14-126 |
phrog_345 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 99.7 | 6.7E-22 | 36-276 / 50-277 |
phrog_3729 | replication initiation protein | DNA, RNA and nucleotide metabolism | 91.9 | 0.027 | 6-142 / 2-134 |
phrog_3926 | replication initiation protein | DNA, RNA and nucleotide metabolism | 95.2 | 0.0011 | 5-112 / 2-92 |
phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 93.0 | 0.013 | 179-238 / 153-209 |
phrog_4880 | replisome organizer | DNA, RNA and nucleotide metabolism | 99.9 | 1E-29 | 4-133 / 1-131 |
phrog_5708 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 99.8 | 5.8E-26 | 1-175 / 1-142 |
phrog_5810 | replication initiation protein | DNA, RNA and nucleotide metabolism | 99.6 | 2.4E-20 | 13-271 / 9-275 |
phrog_5968 | replisome organizer | DNA, RNA and nucleotide metabolism | 99.9 | 1.2E-29 | 1-148 / 3-143 |
phrog_6251 | replisome organizer DnaA-like | DNA, RNA and nucleotide metabolism | 91.0 | 0.042 | 11-113 / 6-100 |
phrog_7882 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 95.6 | 0.0005 | 34-298 / 39-300 |
phrog_8489 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 99.8 | 5.3E-24 | 1-262 / 1-237 |
phrog_9773 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 96.7 | 1.3E-05 | 180-270 / 175-275 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF09681.9 | N-terminal phage replisome organiser (Phage_rep_org_N) | 2.2E-11 | 16-117 / 1-103 |
PF14297.5 | Domain of unknown function (DUF4373) | 1E-07 | 16-101 / 1-81 |
PF06970.10 | Replication initiator protein A (RepA) N-terminus | 2.6E-07 | 16-92 / 2-75 |
PF04492.12 | Bacteriophage replication protein O | 0.0011 | 68-102 / 49-83 |
PF02319.19 | E2F/DP family winged-helix DNA-binding domain | 0.0074 | 69-101 / 24-56 |
PF01726.15 | LexA DNA binding domain | 0.0096 | 69-101 / 26-59 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
no KEGG group similar to this PHROG |
ID | Definition |
---|---|
GO:0006355 | regulation of transcription, DNA-templated |
GO:0003700 | DNA binding transcription factor activity |
GO:0006260 | DNA replication |
GO:0006508 | proteolysis |
GO:0005667 | transcription factor complex |
GO:0004252 | serine-type endopeptidase activity |