phrog_1075 is made of 139 protein sequences and is annotated as "tRNA splicing ligase"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
415.01 1006 396


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
KY940711_p200 ARQ95432.1 protein RtcB KY940711 Bradyrhizobium phage BDU-MI-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_021796_p30 YP_008241411.1 hedgehog/intein domain containing protein NC_021796 Cellulophaga phage phi38:1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
NC_034248_p98 YP_009352355.1 hypothetical protein NC_034248 Rhizobium phage RHEph10 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nickievirus; unclassified Nickievirus.
KY368640_p157 APZ82623.1 tRNA processing protein KY368640 Bacillus phage vB_BsuM-Goe3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; unclassified Bastillevirinae; Bacillus virus vB_BsuM-Goe3.
MF185722_p85 ASR85968.1 RNA ligase MF185722 Mycobacterium phage Peanam Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
NC_009811_p52 YP_001468622.1 gp52 NC_009811 Listeria virus A511 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus.
NC_031230_p65 YP_009301124.1 RNA-splicing ligase NC_031230 Gordonia phage Yvonnetastic Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Yvonnevirus; Gordonia virus Yvonnetastic.
NC_027366_p79 YP_009151038.1 tRNA splicing ligase NC_027366 Bacillus phage Mater Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Bacillus virus Mater.
KJ567045_p86 AID59186.1 RtcB KJ567045 Mycobacterium phage Emerson Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
NC_027341_p112 YP_009147769.1 hypothetical protein NC_027341 Lactococcus phage WRP3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p40013 no NCBI prot ID no annotation VI_05946 Clostridia_gi_544994020 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
MF377440_p85 ASR78016.1 RNA ligase MF377440 Mycobacterium phage Bella96 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
p36072 no NCBI prot ID no annotation VI_05854 Clostridia_gi_544966223 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
MF498901_p19 ASU00866.1 RNA ligase MF498901 Bacillus phage Anthony Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Bastillevirus; unclassified Bastillevirus.
NC_024360_p80 YP_009043065.1 tRNA-splicing ligase NC_024360 Listeria phage LMSP-25 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus LMSP25.
MF140412_p84 ASR86917.1 RNA ligase MF140412 Mycobacterium phage Jeckyll Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
MF547662_p106 AUO78324.1 release factor H-coupled RctB family protein MF547662 Clostridioides phage LIBA6276 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_021320_p45 YP_008058493.1 RtcB NC_021320 Halovirus HRTV-5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p259627 no NCBI prot ID no annotation VI_12019 Gammaproteobacteria_gi_545472011_233_31267 Viruses.
NC_021330_p47 YP_008059609.1 RtcB NC_021330 Halovirus HCTV-1 Viruses; unclassified viruses; unclassified DNA viruses; unclassified archaeal dsDNA viruses; Haloviruses.
JN185608_p83 AEJ93835.1 RtcB JN185608 Mycobacterium virus Jaws Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus.
AP017924_p213 BAW19187.1 putative RtcB-like protein AP017924 Ralstonia phage RP12 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; Ralstonia virus RP12.
NC_019407_p176 YP_006988858.1 putative RtcB-like protein NC_019407 Caulobacter virus Magneto Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dolichocephalovirinae; Shapirovirus; unclassified Shapirovirus.
NC_031056_p18 YP_009285330.1 hypothetical protein NC_031056 Bacillus phage Deep Blue Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Caeruleovirus.
JF704106_p87 AEK08047.1 RtcB JF704106 Mycobacterium virus Anaya Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus.
KY555144_p174 ARB14392.1 protein RtcB KY555144 Caulobacter phage Ccr5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dolichocephalovirinae; Shapirovirus; unclassified Shapirovirus.
MF288922_p18 ASR79956.1 tRNA splicing ligase MF288922 Bacillus phage Janet Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Bastillevirus; unclassified Bastillevirus.
NC_025440_p4 YP_009100967.1 hypothetical protein NC_025440 Listeria phage WIL-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus WIL1.
NC_030936_p66 YP_009276185.1 RtcB-like protein NC_030936 Gordonia phage Bachita Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Smoothievirus.
p31980 no NCBI prot ID no annotation VI_05914 Clostridia_gi_544983294 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_014458_p81 YP_003856960.1 gp82 NC_014458 Mycobacterium virus Angelica Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus.
MF324912_p90 ASR85390.1 RNA ligase MF324912 Mycobacterium phage Phrank Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
p26252 no NCBI prot ID no annotation VI_05764 Clostridia_gi_219723366 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
KT995480_p24 ALO79445.1 tRNA-splicing ligase KT995480 Bacillus phage BM10 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
JF937105_p112 AEK10022.1 RtcB-like RNA terminal phosphate cyclase JF937105 Mycobacterium phage Rey Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mclasvirinae; Reyvirus; Mycobacterium virus Rey.
JN699628_p94 AER26137.1 RtcB JN699628 Mycobacterium phage Bongo Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mclasvirinae; Bongovirus; Mycobacterium virus Bongo.
KY945355_p85 ARQ95524.1 hypothetical protein KY945355 Mycobacterium phage Shandong1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
KY549443_p162 APZ82089.1 hypothetical protein KY549443 Enterococcus phage EFP01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Brockvirinae; Schiekvirus; Enterococcus virus EFP01.
NC_024216_p17 YP_009036920.1 rtcB protein NC_024216 Bacillus phage CAM003 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Bastillevirus.
KX641264_p82 AOT25100.1 RNA ligase KX641264 Mycobacterium phage LindNT Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
NC_031029_p66 YP_009281228.1 RNA-splicing ligase NC_031029 Gordonia phage Cucurbita Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Smoothievirus; unclassified Smoothievirus.
NC_028832_p81 YP_009201714.1 RtcB NC_028832 Mycobacterium phage Omnicron Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
KX585253_p84 AOQ29143.1 tRNA-splicing ligase KX585253 Mycobacterium phage HedwigODU Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
JF704105_p83 AEJ95853.1 RNA terminal phosphate cyclase JF704105 Mycobacterium phage Adephagia Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
NC_009817_p109 YP_001469108.1 gp109 NC_009817 Lactococcus virus KSY1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
NC_019410_p180 YP_006989560.1 putative RtcB-like protein NC_019410 Caulobacter virus Karma Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dolichocephalovirinae; Shapirovirus; unclassified Shapirovirus.
NC_003345_p69 NP_542563.1 RTCB-like protein NC_003345 Halorubrum phage HF2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_030917_p55 YP_009274480.1 RtcB-like protein NC_030917 Gordonia phage OneUp Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Oneupvirus.
NC_020873_p37 YP_007676935.1 hypothetical protein NC_020873 Bacillus phage vB_BceM_Bc431v3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Caeruleovirus.
NC_030901_p65 YP_009273108.1 RtcB-like protein NC_030901 Gordonia phage ClubL Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Smoothievirus.
NC_021781_p73 YP_008240037.1 tRNA-splicing ligase NC_021781 Listeria phage LP-125 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus LP083-2.
NC_019408_p175 YP_006989204.1 putative RtcB-like protein NC_019408 Caulobacter virus Rogue Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phicbkvirus.
NC_023747_p84 YP_009019064.1 gp85 NC_023747 Mycobacterium phage BarrelRoll Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
NC_024207_p19 YP_009035540.1 rtcB protein NC_024207 Bacillus phage Evoli Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Bastillevirus; Bacillus virus Evoli.
p12816 no NCBI prot ID no annotation VI_00893 Bacilli_gi_323650955 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
KY555143_p175 ARB14049.1 protein RtcB KY555143 Caulobacter phage Ccr2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dolichocephalovirinae; Shapirovirus; unclassified Shapirovirus.
p37358 no NCBI prot ID no annotation VI_05911 Clostridia_gi_544982686 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
KT151957_p159 ALA07482.1 putative RtcB protein KT151957 Brevibacillus phage SecTim467 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Jenstvirus; Brevibacillus virus Jenst.
NC_023744_p76 YP_009018764.1 gp76 NC_023744 Mycobacterium phage DS6A Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_023724_p76 YP_009016440.1 gp77 NC_023724 Mycobacterium virus Larva Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus.
MG655267_p49 AUG85837.1 putative RtcB-like protein MG655267 Erwinia phage vB_EamM_Bosolaphorus Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
KJ586795_p131 AID17219.1 tRNA-splicing ligase KJ586795 Listeria phage LMTA-94 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus LMSP25.
MF319184_p110 ASR75956.1 RNA terminal phosphate cyclase MF319184 Mycobacterium phage GenevaB15 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mclasvirinae; Reyvirus; unclassified Reyvirus.
KY223999_p111 APQ42214.1 RNA terminal phosphate cyclase KY223999 Mycobacterium phage MrMagoo Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mclasvirinae; Reyvirus; unclassified Reyvirus.
p28448 no NCBI prot ID no annotation VI_05888 Clostridia_gi_544975022 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
KU886222_p50 ANJ64860.1 putative RtcB-like protein KU886222 Erwinia phage vB_EamM_Special G Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus SpecialG.
MF140428_p86 ASR87599.1 RNA ligase MF140428 Mycobacterium phage Slimphazie Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
NC_019405_p178 YP_006988074.1 putative RtcB-like protein NC_019405 Caulobacter virus phiCbK Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dolichocephalovirinae; Shapirovirus.
KX774321_p150 AOZ63738.1 tRNA-splicing ligase KX774321 Rhodococcus phage Weasels2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Weaselvirus; Rhodococcus virus Weasel.
MG962364_p84 AVO24838.1 RNA ligase MG962364 Mycobacterium phage Deby Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
p315450 no NCBI prot ID no annotation VI_05290 Bacilli_gi_484234829 Viruses.
NC_029048_p112 YP_009221697.1 tRNA-splicing ligase, RtcB NC_029048 Clostridium phage phiCD211 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
MF185717_p77 ASM62584.1 RNA ligase MF185717 Mycobacterium phage AlleyCat Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
MG962371_p84 AVO25598.1 RNA ligase MG962371 Mycobacterium phage LaterM Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
MF140416_p90 ASR87258.1 RNA ligase MF140416 Mycobacterium phage LastHope Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
NC_030696_p66 YP_009269187.1 RtcB-like protein NC_030696 Gordonia phage Smoothie Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Smoothievirus.
KX657794_p84 AOZ61416.1 RNA ligase KX657794 Mycobacterium phage SamuelLPlaqson Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
MF324915_p85 ASR85685.1 RNA ligase MF324915 Mycobacterium phage Amgine Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
MF663786_p41 ATI15659.1 RNA-splicing ligase MF663786 Bordetella phage vB_BbrM_PHB04 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phabquatrovirus; Bordetella virus PHB04.
NC_019402_p61 YP_006987708.1 hypothetical protein NC_019402 Cronobacter phage vB_CsaP_GAP52 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
MF324911_p84 ASR85287.1 RNA ligase MF324911 Mycobacterium phage SirPhilip Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
MG655269_p49 AUG86477.1 putative RtcB-like protein MG655269 Erwinia phage vB_EamM_MadMel Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
MF185719_p74 ASR85771.1 RNA ligase MF185719 Mycobacterium phage Edugator Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
NC_014459_p84 YP_003857057.1 gp85 NC_014459 Mycobacterium virus Crimd Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus.
NC_023574_p119 YP_009006997.1 hypothetical protein NC_023574 Lactococcus phage phiL47 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
KT591491_p95 ALF00623.1 RNA ligase KT591491 Mycobacterium phage Bricole Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mclasvirinae; Bongovirus; unclassified Bongovirus.
NC_021321_p42 YP_008058608.1 RtcB NC_021321 Halovirus HRTV-8 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
KU737346_p20 AMW61771.1 hypothetical protein KU737346 Bacillus phage Vinny Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Bastillevirus; unclassified Bastillevirus.
CP011970_p100 AKP44774.1 hypothetical protein CP011970 Peptoclostridium phage phiCDIF1296T Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
MF324908_p90 ASR85100.1 RNA ligase MF324908 Mycobacterium phage Unicorn Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
MF324914_p89 ASR85588.1 RNA ligase MF324914 Mycobacterium phage Krueger Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
KY087993_p82 APD18245.1 RNA ligase KY087993 Mycobacterium phage Hammy Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
p50537 no NCBI prot ID no annotation VI_01008 Bacteroidia_gi_423312783_668033_724965 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
KJ591605_p162 AID17616.1 tRNA-splicing ligase KJ591605 Listeria phage LMTA-57 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus LMSP25.
KU886225_p51 ANH52149.1 putative RtcB-like protein KU886225 Erwinia phage vB_EamM_Deimos-Minion Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Deimos.
NC_010811_p82 YP_001949958.1 hypothetical protein NC_010811 Ralstonia phage phiRSL1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Mieseafarmvirus.
NC_019406_p216 YP_006988450.1 putative RtcB-like protein NC_019406 Caulobacter phage CcrColossus Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dolichocephalovirinae; Colossusvirus; Caulobacter virus CcrColossus.
NC_028936_p69 YP_009211154.1 RctB RNA ligase NC_028936 Mycobacterium phage Enkosi Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
MG655268_p48 AUG86156.1 putative RtcB-like protein MG655268 Erwinia phage vB_EamM_Desertfox Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Desertfox.
NC_024359_p54 YP_009042862.1 tRNA-splicing ligase NC_024359 Listeria phage LP-048 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus LP048.
NC_021328_p107 YP_008059315.1 RtcB NC_021328 Halovirus HGTV-1 Viruses; unclassified viruses; unclassified DNA viruses; unclassified archaeal dsDNA viruses; Haloviruses.
MF288921_p17 ASR79445.1 tRNA splicing ligase MF288921 Bacillus phage OTooleKemple52 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Bastillevirus; unclassified Bastillevirus.
MF140406_p82 ASW31829.1 RNA ligase MF140406 Mycobacterium phage DarthP Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
MF668267_p86 ASZ72712.1 RNA ligase MF668267 Mycobacterium phage Apocalypse Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
NC_028805_p154 YP_009199215.1 putative RtcB protein NC_028805 Brevibacillus phage Jenst Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Jenstvirus.
NC_022771_p171 YP_008771537.1 tRNA processing protein NC_022771 Bacillus phage Grass Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Nitunavirus.
KY629563_p89 ARK07489.1 RNA-splicing ligase KY629563 Sphingobium phage Lacusarx Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Lacusarxvirus; Sphingobium virus Lacusarx.
MF547663_p105 AUO78495.1 release factor H-coupled RctB family protein MF547663 Clostridioides phage LIBA2945 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_024364_p119 YP_009043495.1 RtcB NC_024364 Listeria phage List-36 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus List36.
NC_024137_p29 YP_009031310.1 uncharacterized protein family UPF0027 NC_024137 Bacillus phage Bcp1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Caeruleovirus.
p30358 no NCBI prot ID no annotation VI_05871 Clostridia_gi_544969844 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
DQ004855_p160 AAY53463.1 gp160 DQ004855 Listeria virus P100 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus.
KY555145_p178 ARB14736.1 protein RtcB KY555145 Caulobacter phage Ccr29 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dolichocephalovirinae; Shapirovirus; unclassified Shapirovirus.
KU886224_p48 ANH51829.1 putative RtcB-like protein KU886224 Erwinia phage vB_EamM_RAY Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus RAY.
MF140398_p82 ASR86363.1 RNA ligase MF140398 Mycobacterium phage Amohnition Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
NC_024366_p78 YP_009043680.1 RtcB NC_024366 Mycobacterium phage OkiRoe Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
NC_023557_p48 YP_009004840.1 putative RtcB-like protein NC_023557 Erwinia phage Ea35-70 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus.
NC_004927_p62 NP_861650.1 similar to RTCB protein NC_004927 Halovirus HF1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_019411_p175 YP_006989908.1 putative RtcB-like protein NC_019411 Caulobacter virus Swift Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dolichocephalovirinae; Shapirovirus.
AP017925_p210 BAW19473.1 putative RtcB-like protein AP017925 Ralstonia phage RP31 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; unclassified Ripduovirus.
NC_024383_p67 YP_009044524.1 tRNA-splicing ligase NC_024383 Listeria phage LP-083-2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus LP083-2.
NC_020871_p45 YP_007676713.1 hypothetical protein NC_020871 Listeria phage vB_LmoM_AG20 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus AG20.
NC_024205_p16 YP_009035213.1 rtcB protein NC_024205 Bacillus phage Hoody T Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Bastillevirus; Bacillus virus HoodyT.
MF919532_p81 ATS92830.1 RNA ligase MF919532 Mycobacterium phage Sulley Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
MG655270_p49 AUG86798.1 putative RtcB-like protein MG655270 Erwinia phage vB_EamM_Mortimer Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
MF140430_p84 ASR87689.1 RNA ligase MF140430 Mycobacterium phage Tachez Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
NC_023498_p90 YP_009002741.1 RtcB-like protein NC_023498 Mycobacterium phage Validus Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
NC_028978_p84 YP_009215588.1 RtcB NC_028978 Mycobacterium phage Murucutumbu Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
MF324913_p90 ASR85491.1 RNA ligase MF324913 Mycobacterium phage Cain Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
NC_021327_p45 YP_008059087.1 RtcB NC_021327 Halovirus HCTV-5 Viruses; unclassified viruses; unclassified DNA viruses; unclassified archaeal dsDNA viruses; Haloviruses.
MF919537_p66 AUE23642.1 RNA ligase MF919537 Gordonia phage Toniann Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Smoothievirus; unclassified Smoothievirus.
NC_021299_p98 YP_008051030.1 RtcB NC_021299 Mycobacterium phage PegLeg Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mclasvirinae; Bongovirus; unclassified Bongovirus.
MH001453_p84 AVO22022.1 hypothetical protein MH001453 Mycobacterium phage Adonis Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
MF472892_p86 ASZ75156.1 RNA ligase MF472892 Mycobacterium phage TreyKay Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
MF919520_p66 ATN90699.1 RNA-splicing ligase MF919520 Gordonia phage Lozinak Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Smoothievirus; unclassified Smoothievirus.
KU873925_p30 AND74954.1 hypothetical protein KU873925 Pseudomonas phage pf16 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chakrabartyvirus; Pseudomonas virus pf16.
NC_019487_p87 YP_007003344.1 hypothetical protein NC_019487 Bacillus phage SP-10 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Spounavirinae; unclassified Spounavirinae.
NC_027355_p57 YP_009149618.1 putative RTCB protein NC_027355 Bacillus phage BCP8-2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Caeruleovirus.
NC_027352_p28 YP_009149066.1 putative RtcB protein NC_027352 Bacillus phage JBP901 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Bastillevirinae; Caeruleovirus.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_3167 46 no annotation unknown function 33 1.87E-110 100.85
phrog_6426 19 no annotation unknown function 19 0 1000
phrog_9717 11 no annotation unknown function 10 1.92E-39 29.84
phrog_9650 11 no annotation unknown function 10 1.92E-39 29.84
phrog_9643 11 no annotation unknown function 9 7.12E-35 25.27
phrog_11652 9 no annotation unknown function 8 2.17E-32 22.78
phrog_12749 8 no annotation unknown function 8 0 1000
phrog_13241 7 no annotation unknown function 7 0 1000
phrog_4334 32 no annotation unknown function 7 7.60E-22 12.24
phrog_7956 14 no annotation unknown function 7 2.18E-25 15.78
phrog_2822 51 no annotation unknown function 7 4.58E-20 10.46
phrog_13648 7 no annotation unknown function 6 2.42E-25 15.74
phrog_15337 6 no annotation unknown function 6 0 1000
phrog_6641 18 secreted protein other 5 1.49E-17 7.95
phrog_9980 10 no annotation unknown function 5 1.69E-19 9.89
phrog_19138 4 no annotation unknown function 4 0 1000
phrog_20636 4 no annotation unknown function 3 8.78E-15 5.18
phrog_15191 6 no annotation unknown function 3 1.32E-13 4.0
phrog_14043 7 DNA primase DNA, RNA and nucleotide metabolism 3 3.07E-13 3.63
phrog_10971 9 no annotation unknown function 3 1.10E-12 3.08
phrog_23532 3 no annotation unknown function 3 0 1000
phrog_24958 3 no annotation unknown function 3 0 1000
phrog_35403 2 no annotation unknown function 2 0 1000
phrog_30901 2 no annotation unknown function 2 0 1000
phrog_30629 2 no annotation unknown function 2 0 1000
phrog_36436 2 no annotation unknown function 2 0 1000
phrog_35760 2 no annotation unknown function 2 0 1000
phrog_33773 2 no annotation unknown function 2 0 1000
phrog_26807 3 no annotation unknown function 2 2.88E-11 1.66

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_17036 no annotation unknown function 95.2 0.00097 17-66 / 26-73
phrog_32430 tRNA splicing ligase RtcB DNA, RNA and nucleotide metabolism 100.0 2.7E-54 257-395 / 6-136

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF01139.16 tRNA-splicing ligase RtcB 1.5E-54 80-443 / 1-435

Annotations of the NCBI proteins of this PHROG


27:RNA ligase 21:RtcB-like protein 19:RtcB 18:hypothetical protein 9:tRNA-splicing ligase 5:RNA-splicing ligase 4:protein RtcB 3:tRNA splicing ligase 3:RNA terminal phosphate cyclase 3:rtcB protein 3:RtcB protein 2:tRNA processing protein 2:release factor H-coupled RctB family protein 1:RTCB-like protein 1:RctB RNA ligase 1:RTCB protein 1:similar to RTCB protein 1:tRNA-splicing ligase, RtcB 1:RtcB-like RNA terminal phosphate cyclase 1:hedgehog/intein domain containing protein 1:protein of an unannotated phage 1:uncharacterized protein family UPF0027

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K14415 RTCB, rtcB : tRNA-splicing ligase RtcB [EC:6.5.1.3] no pathways 660 84

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006396 RNA processing
GO:0008452 RNA ligase activity

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