Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
160.89 | 177 | 174 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
JN849462_p236 | AFN37469.1 | hypothetical protein | JN849462 | Vibriophage phi-pp2 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Schizotequatrovirus; Vibrio virus KVP40. |
KT919973_p117 | ALP47511.1 | hypothetical protein | KT919973 | Vibrio phage phi-ST2 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Schizotequatrovirus; unclassified Schizotequatrovirus. |
NC_005083_p238 | NP_899486.1 | hypothetical protein | NC_005083 | Vibrio phage KVP40 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Schizotequatrovirus. |
NC_028829_p5 | YP_009201108.1 | hypothetical protein | NC_028829 | Vibrio phage ValKK3 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Schizotequatrovirus. |
KT919972_p365 | ALP47126.1 | hypothetical protein | KT919972 | Vibrio phage phi-Grn1 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Schizotequatrovirus; unclassified Schizotequatrovirus. |
NC_023568_p139 | YP_009006213.1 | hypothetical protein | NC_023568 | Vibrio phage VH7D | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Schizotequatrovirus; unclassified Schizotequatrovirus. |
NC_021529_p114 | YP_008125444.2 | hypothetical protein | NC_021529 | Vibrio phage nt-1 (nt-1) | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Schizotequatrovirus. |
NC_028825_p10 | YP_009200749.1 | hypothetical protein | NC_028825 | Escherichia phage vB_EcoM_AYO145A | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Felixounavirus. |
NC_028808_p41 | YP_009199341.1 | hypothetical protein | NC_028808 | Escherichia phage SUSP1 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Suspvirus. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_11410 | 9 | no annotation | unknown function | 5 | 2.11E-27 | 17.8 |
phrog_8363 | 13 | no annotation | unknown function | 4 | 2.24E-21 | 11.77 |
phrog_4453 | 31 | no annotation | unknown function | 2 | 3.02E-11 | 1.64 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_23365 | no annotation | unknown function | 98.9 | 3.8E-13 | 103-172 / 65-137 |
phrog_7424 | no annotation | unknown function | 95.9 | 0.00024 | 100-168 / 77-145 |
phrog_8162 | no annotation | unknown function | 98.8 | 1.7E-12 | 102-173 / 19-83 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF07638.10 | ECF sigma factor | 1.1E-08 | 61-122 / 125-178 |
PF06054.10 | Competence protein CoiA-like family | 1.5E-08 | 123-176 / 29-79 |
PF07374.10 | Protein of unknown function (DUF1492) | 1.1E-06 | 57-120 / 42-98 |
PF05331.10 | Protein of unknown function (DUF742) | 1.3E-06 | 68-121 / 37-81 |
PF11682.7 | Probable zinc-ribbon | 1.3E-06 | 123-172 / 26-80 |
PF03333.12 | Adhesin biosynthesis transcription regulatory protein | 1.4E-06 | 62-121 / 32-83 |
PF06530.11 | Phage antitermination protein Q | 2.8E-06 | 61-122 / 54-108 |
PF05263.10 | Protein of unknown function (DUF722) | 4.9E-06 | 56-120 / 68-131 |
PF04545.15 | Sigma-70, region 4 | 1E-05 | 67-119 / 2-50 |
PF04297.13 | Putative helix-turn-helix protein, YlxM / p13 like | 1.3E-05 | 61-121 / 9-61 |
PF08281.11 | Sigma-70, region 4 | 1.6E-05 | 62-118 / 3-51 |
PF16264.4 | SatD family (SatD) | 2.2E-05 | 58-121 / 139-199 |
PF16509.4 | TrfB plasmid transcriptional repressor | 2.6E-05 | 60-119 / 6-57 |
PF02001.15 | Protein of unknown function DUF134 | 3.9E-05 | 64-122 / 26-76 |
PF12759.6 | InsA C-terminal domain | 0.00072 | 70-115 / 6-43 |
PF01371.18 | Trp repressor protein | 0.00087 | 62-119 / 18-74 |
PF13613.5 | Helix-turn-helix of DDE superfamily endonuclease | 0.0011 | 70-120 / 3-46 |
PF12855.6 | Life-span regulatory factor | 0.0012 | 125-160 / 5-36 |
PF07750.10 | GcrA cell cycle regulator | 0.0013 | 71-118 / 4-44 |
PF10013.8 | Uncharacterized protein conserved in bacteria (DUF2256) | 0.0026 | 124-157 / 6-39 |
PF13936.5 | Helix-turn-helix domain | 0.0029 | 70-106 / 5-37 |
PF02796.14 | Helix-turn-helix domain of resolvase | 0.0033 | 86-106 / 18-38 |
PF11242.7 | Protein of unknown function (DUF2774) | 0.0035 | 74-120 / 4-41 |
PF05225.15 | helix-turn-helix, Psq domain | 0.0043 | 86-116 / 13-40 |
PF04552.12 | Sigma-54, DNA binding domain | 0.0043 | 61-118 / 22-73 |
PF04967.11 | HTH DNA binding domain | 0.0045 | 90-119 / 24-49 |
PF04218.12 | CENP-B N-terminal DNA-binding domain | 0.0048 | 86-119 / 19-49 |
PF09862.8 | Protein of unknown function (DUF2089) | 0.0058 | 65-120 / 29-76 |
PF11427.7 | Tc3 transposase | 0.0062 | 71-118 / 6-45 |
PF06056.11 | Putative ATPase subunit of terminase (gpP-like) | 0.0065 | 86-118 / 10-38 |
PF08822.10 | Protein of unknown function (DUF1804) | 0.0069 | 70-118 / 3-44 |
PF14803.5 | Nudix N-terminal | 0.0074 | 127-138 / 2-13 |
PF00196.18 | Bacterial regulatory proteins, luxR family | 0.0074 | 70-120 / 3-44 |
PF04814.12 | Hepatocyte nuclear factor 1 (HNF-1), N terminus | 0.008 | 62-115 / 102-148 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
no KEGG group similar to this PHROG |
ID | Definition |
---|---|
GO:0005524 | ATP binding |
GO:0005634 | nucleus |
GO:0000150 | recombinase activity |
GO:0003700 | DNA binding transcription factor activity |
GO:0003677 | DNA binding |
GO:0006310 | DNA recombination |
GO:0006355 | regulation of transcription, DNA-templated |
GO:0045893 | positive regulation of transcription, DNA-templated |
GO:0006352 | DNA-templated transcription, initiation |
GO:0005622 | intracellular |
GO:0019069 | viral capsid assembly |
GO:0060567 | negative regulation of DNA-templated transcription, termination |
GO:0016987 | sigma factor activity |