phrog_11108 is made of 9 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
188.89 324 173


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p409081 no NCBI prot ID no annotation VI_00455 Bacilli_gi_262047904 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p416202 no NCBI prot ID no annotation VI_00456 Bacilli_gi_262047917 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p365942 no NCBI prot ID no annotation VI_05470 Bacilli_gi_395238799 Viruses.
NC_019456_p62 YP_007003025.1 hypothetical protein NC_019456 Lactobacillus phage JCL1032 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p212860 no NCBI prot ID no annotation VI_00799 Bacilli_gi_268318562_730561_765995 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_000896_p36 NP_050144.1 hypothetical protein NC_000896 Lactobacillus phage phiadh Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p86731 no NCBI prot ID no annotation VI_05309 Bacilli_gi_523688505_5844_52726 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Lactobacillus phage phiadh.
p242963 no NCBI prot ID no annotation VI_05364 Bacilli_gi_544942779 Viruses.
NC_009554_p51 YP_001285926.1 hypothetical protein NC_009554 Lactobacillus phage LL-H Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_248 477 transcriptional activator transcription regulation 6 2.18E-19 9.78
phrog_3180 45 Arc-like repressor transcription regulation 2 7.94E-11 1.22

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_14826 no annotation unknown function 99.2 8.5E-15 7-166 / 24-217
phrog_15092 no annotation unknown function 98.1 3E-09 8-156 / 5-153
phrog_25897 no annotation unknown function 94.9 0.0017 5-81 / 7-87
phrog_3855 HTH DNA binding protein DNA, RNA and nucleotide metabolism 91.4 0.035 49-83 / 69-103
phrog_4494 no annotation unknown function 90.6 0.05 50-137 / 8-102
phrog_7067 terminase small subunit head and packaging 91.8 0.028 50-82 / 22-54

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF04552.12 Sigma-54, DNA binding domain 0.00015 155-260 / 29-147
PF07638.10 ECF sigma factor 0.00019 148-201 / 126-178
PF00292.17 'Paired box' domain 0.0002 156-198 / 17-59
PF08822.10 Protein of unknown function (DUF1804) 0.0012 158-199 / 4-46
PF07374.10 Protein of unknown function (DUF1492) 0.0014 143-197 / 42-96
PF03333.12 Adhesin biosynthesis transcription regulatory protein 0.0014 149-199 / 33-82
PF05331.10 Protein of unknown function (DUF742) 0.0022 155-200 / 37-81
PF07750.10 GcrA cell cycle regulator 0.003 158-198 / 4-45
PF12759.6 InsA C-terminal domain 0.0031 162-195 / 11-44
PF08281.11 Sigma-70, region 4 0.0033 150-196 / 5-50
PF06530.11 Phage antitermination protein Q 0.0044 155-201 / 61-108
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 0.0051 163-198 / 4-39
PF16509.4 TrfB plasmid transcriptional repressor 0.0052 148-198 / 8-57
PF16264.4 SatD family (SatD) 0.0057 141-199 / 136-198
PF01710.15 Transposase 0.0067 158-198 / 4-44
PF04545.15 Sigma-70, region 4 0.0069 155-197 / 3-49

Annotations of the NCBI proteins of this PHROG


3:hypothetical protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006355 regulation of transcription, DNA-templated
GO:0006352 DNA-templated transcription, initiation
GO:0019069 viral capsid assembly
GO:0060567 negative regulation of DNA-templated transcription, termination
GO:0016987 sigma factor activity
GO:0005524 ATP binding
GO:0003700 DNA binding transcription factor activity
GO:0003677 DNA binding

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