phrog_11527 is made of 9 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
332.89 355 338


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
MF490237_p47 ASZ72187.1 hypothetical protein MF490237 Pseudomonas phage vB_PaeP_E220 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Hollowayvirus; unclassified Hollowayvirus.
p27000 no NCBI prot ID no annotation VI_03058 Gammaproteobacteria_gi_553760403_1889527_1959861 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Hollowayvirus; Pseudomonas virus F116; Pseudomonas phage F116.
p398400 no NCBI prot ID no annotation VI_08947 Gammaproteobacteria_gi_484344445 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p203379 no NCBI prot ID no annotation VI_06667 Gammaproteobacteria_gi_302122179 Viruses.
p34529 no NCBI prot ID no annotation VI_09051 Gammaproteobacteria_gi_485067076 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Hollowayvirus; Pseudomonas virus F116; Pseudomonas phage F116.
KC900378_p33 AGR46385.1 hypothetical protein KC900378 Pseudomonas phage LKA5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Hollowayvirus; unclassified Hollowayvirus.
KU708004_p45 AMW64505.1 replication protein KU708004 Pseudomonas phage phiAH14a Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KC262634_p35 AGC34644.1 hypothetical protein KC262634 Pseudomonas virus H66 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Hollowayvirus.
p347355 no NCBI prot ID no annotation VI_09435 Gammaproteobacteria_gi_429331750 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_6028 21 no annotation unknown function 9 1.61E-43 33.92
phrog_35 1577 transcriptional repressor transcription regulation 5 5.23E-13 3.4

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_391 replication initiation O-like DNA, RNA and nucleotide metabolism 98.7 1.1E-11 188-324 / 173-312
phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 91.6 0.032 8-83 / 17-81

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF04492.12 Bacteriophage replication protein O 8.8E-06 22-104 / 22-95
PF04358.12 DsrC like protein 3.8E-05 22-91 / 34-94
PF10007.8 Uncharacterized protein conserved in archaea (DUF2250) 4E-05 56-92 / 23-56
PF04079.15 Segregation and condensation complex subunit ScpB 5.5E-05 22-108 / 78-148
PF05584.10 Sulfolobus plasmid regulatory protein 0.00011 56-92 / 19-52
PF06970.10 Replication initiator protein A (RepA) N-terminus 0.00011 15-82 / 5-75
PF14557.5 Putative AphA-like transcriptional regulator 0.00013 22-111 / 3-89
PF16221.4 winged helix-turn-helix 0.00015 56-90 / 47-78
PF09114.9 Transcription factor MotA, activation domain 0.00015 22-111 / 11-80
PF11313.7 Protein of unknown function (DUF3116) 0.00018 64-110 / 36-80
PF02319.19 E2F/DP family winged-helix DNA-binding domain 0.00021 56-91 / 24-56
PF01978.18 Sugar-specific transcriptional regulator TrmB 0.00021 56-93 / 23-57
PF05732.10 Firmicute plasmid replication protein (RepL) 0.00021 14-92 / 41-109
PF14277.5 Domain of unknown function (DUF4364) 0.00027 56-110 / 16-71
PF03965.15 Penicillinase repressor 0.00032 56-105 / 19-70
PF13463.5 Winged helix DNA-binding domain 0.00036 56-92 / 18-51
PF01090.18 Ribosomal protein S19e 0.00041 56-110 / 66-133
PF03428.12 Replication protein C N-terminal domain 0.00045 18-94 / 34-107
PF03551.13 Transcriptional regulator PadR-like family 0.00051 56-106 / 15-69
PF07848.11 PaaX-like protein 0.00079 56-103 / 21-68
PF08222.10 CodY helix-turn-helix domain 0.0008 56-92 / 5-38
PF09202.10 Rio2, N-terminal 0.00083 56-108 / 25-73
PF01726.15 LexA DNA binding domain 0.00093 56-92 / 26-60
PF13601.5 Winged helix DNA-binding domain 0.00093 56-107 / 15-67
PF09857.8 Putative toxin of bacterial toxin-antitoxin pair 0.001 24-109 / 2-77
PF02334.15 Replication terminator protein 0.0011 67-112 / 52-103
PF01475.18 Ferric uptake regulator family 0.0014 23-103 / 3-73
PF08784.10 Replication protein A C terminal 0.0015 23-92 / 36-95
PF14947.5 Winged helix-turn-helix 0.0015 56-109 / 17-68
PF03444.14 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 0.0015 56-105 / 25-70
PF10771.8 Winged helix-turn-helix domain (DUF2582) 0.0016 25-96 / 6-60
PF08221.10 RNA polymerase III subunit RPC82 helix-turn-helix domain 0.0016 56-91 / 28-60
PF09012.9 FeoC like transcriptional regulator 0.0019 56-94 / 15-50
PF07106.12 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) 0.002 56-103 / 17-63
PF13730.5 Helix-turn-helix domain 0.0022 24-88 / 2-52
PF09639.9 YjcQ protein 0.0024 56-110 / 17-81
PF02002.16 TFIIE alpha subunit 0.0023 56-93 / 27-61
PF12793.6 Sugar transport-related sRNA regulator N-term 0.0029 56-107 / 19-70
PF05158.11 RNA polymerase Rpc34 subunit 0.0031 23-93 / 88-143
PF10711.8 Hypothetical protein (DUF2513) 0.003 57-112 / 20-85
PF02295.16 Adenosine deaminase z-alpha domain 0.0031 56-102 / 19-62
PF06163.10 Bacterial protein of unknown function (DUF977) 0.0033 56-93 / 27-61
PF01638.16 HxlR-like helix-turn-helix 0.0033 56-108 / 20-73
PF12802.6 MarR family 0.0034 56-92 / 22-55
PF09904.8 Winged helix-turn helix 0.0034 56-105 / 22-73
PF14394.5 Domain of unknown function (DUF4423) 0.0035 56-105 / 37-85
PF01047.21 MarR family 0.0047 56-92 / 18-51
PF04182.11 B-block binding subunit of TFIIIC 0.0052 56-93 / 19-53
PF14502.5 Helix-turn-helix domain 0.0081 56-92 / 7-40

Annotations of the NCBI proteins of this PHROG


2:hypothetical protein 1:replication protein 1:protein of an unannotated phage

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0005666 DNA-directed RNA polymerase III complex
GO:0006508 proteolysis
GO:0006276 plasmid maintenance
GO:0005524 ATP binding
GO:0004252 serine-type endopeptidase activity
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0051304 chromosome separation
GO:0006355 regulation of transcription, DNA-templated
GO:0006412 translation
GO:0006468 protein phosphorylation
GO:0003677 DNA binding
GO:0003726 double-stranded RNA adenosine deaminase activity
GO:0003700 DNA binding transcription factor activity
GO:0005840 ribosome
GO:0006274 DNA replication termination
GO:0005667 transcription factor complex
GO:0045892 negative regulation of transcription, DNA-templated
GO:0006260 DNA replication
GO:0006383 transcription by RNA polymerase III
GO:0004674 protein serine/threonine kinase activity
GO:0007131 reciprocal meiotic recombination

Loading in process