Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
141.89 | 264 | 128 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
p36461 | no NCBI prot ID | no annotation | VI_11179 | Gammaproteobacteria_gi_484208983_0_62434 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p25210 | no NCBI prot ID | no annotation | VI_09041 | Gammaproteobacteria_gi_485061967 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
p309876 | no NCBI prot ID | no annotation | VI_09020 | Gammaproteobacteria_gi_485052431_8020_32680 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p160834 | no NCBI prot ID | no annotation | VI_05670 | Betaproteobacteria_gi_498489846 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p14148 | no NCBI prot ID | no annotation | VI_01294 | Clostridia_gi_512436394 | Viruses. |
p14107 | no NCBI prot ID | no annotation | VI_01294 | Clostridia_gi_512436394 | Viruses. |
p24228 | no NCBI prot ID | no annotation | VI_04172 | Actinobacteria_gi_459042216 | Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses. |
p333803 | no NCBI prot ID | no annotation | VI_12059 | Gammaproteobacteria_gi_484034219_179174_200971 | Viruses. |
p53511 | no NCBI prot ID | no annotation | VI_01191 | Clostridia_gi_336440810_359795_415074 | Viruses. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
no colocalized PHROGS |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_11967 | no annotation | unknown function | 92.0 | 0.025 | 4-38 / 12-46 |
phrog_15534 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 93.4 | 0.0096 | 3-56 / 35-86 |
phrog_1668 | tail assembly protein | tail | 93.1 | 0.013 | 8-38 / 19-49 |
phrog_1729 | no annotation | unknown function | 94.6 | 0.0028 | 7-53 / 84-128 |
phrog_19880 | transcriptional regulator | transcription regulation | 97.4 | 5.8E-07 | 5-56 / 70-120 |
phrog_20793 | no annotation | unknown function | 97.2 | 1.8E-06 | 1-51 / 1-51 |
phrog_20864 | no annotation | unknown function | 93.2 | 0.012 | 4-76 / 18-91 |
phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 96.5 | 3.3E-05 | 5-55 / 13-63 |
phrog_2655 | excisionase | integration and excision | 93.0 | 0.013 | 5-46 / 5-47 |
phrog_30032 | no annotation | unknown function | 94.1 | 0.005 | 34-76 / 2-44 |
phrog_3470 | no annotation | unknown function | 96.7 | 1.6E-05 | 5-75 / 4-77 |
phrog_4745 | DNA binding protein | DNA, RNA and nucleotide metabolism | 92.5 | 0.019 | 5-52 / 2-55 |
phrog_575 | Cox-like excisionase and repressor | integration and excision | 91.8 | 0.029 | 3-38 / 9-44 |
phrog_57 | terminase small subunit | head and packaging | 93.1 | 0.012 | 6-35 / 1-30 |
phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | 96.8 | 1.2E-05 | 3-52 / 10-56 |
phrog_6401 | DNA binding protein | DNA, RNA and nucleotide metabolism | 93.8 | 0.0069 | 2-51 / 4-52 |
phrog_6620 | transposase | integration and excision | 98.1 | 3.2E-09 | 5-57 / 1-53 |
phrog_66 | excisionase and transcriptional regulator | integration and excision | 97.0 | 4.4E-06 | 2-56 / 4-58 |
phrog_7735 | excisionase | integration and excision | 94.6 | 0.0027 | 2-51 / 12-60 |
phrog_803 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 92.5 | 0.019 | 9-30 / 20-41 |
phrog_9440 | no annotation | unknown function | 95.1 | 0.0012 | 6-56 / 59-116 |
phrog_9759 | DNA binding protein | DNA, RNA and nucleotide metabolism | 94.7 | 0.0022 | 8-31 / 19-42 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF08876.10 | Domain of unknown function (DUF1836) | 0.00039 | 17-83 / 8-78 |
PF13591.5 | MerR HTH family regulatory protein | 2.3E-06 | 20-69 / 1-48 |
PF13411.5 | MerR HTH family regulatory protein | 6.9E-07 | 20-84 / 1-65 |
PF16701.4 | Adenylate cyclase regulatory domain | 0.0057 | 18-82 / 57-119 |
PF11112.7 | Pyocin activator protein PrtN | 5.2E-05 | 132-178 / 12-64 |
PF04936.11 | Protein of unknown function (DUF658) | 0.0041 | 18-46 / 87-115 |
PF09035.9 | Excisionase from transposon Tn916 | 5.1E-05 | 132-179 / 14-62 |
PF07618.10 | Protein of unknown function (DUF1580) | 0.00029 | 136-179 / 5-52 |
PF07825.10 | Excisionase-like protein | 1.5E-05 | 134-176 / 3-48 |
PF12964.6 | Protein of unknown function (DUF3853) | 2.5E-05 | 132-179 / 44-92 |
PF13171.5 | Protein of unknown function (DUF4004) | 3.8E-05 | 134-202 / 3-77 |
PF06806.11 | Putative excisionase (DUF1233) | 0.00037 | 133-178 / 9-64 |
PF10743.8 | Regulatory phage protein cox | 0.00038 | 132-179 / 10-62 |
PF05930.11 | Prophage CP4-57 regulatory protein (AlpA) | 5.7E-05 | 133-177 / 3-49 |
PF17443.1 | Uncharacterized protein pXO2-72 | 0.00014 | 132-154 / 7-29 |
PF00376.22 | MerR family regulatory protein | 0.00013 | 135-161 / 1-27 |
PF12728.6 | Helix-turn-helix domain | 0.00014 | 134-178 / 2-46 |
PF07471.11 | Phage DNA packaging protein Nu1 | 0.00046 | 133-176 / 2-49 |
PF07278.10 | Protein of unknown function (DUF1441) | 0.00059 | 134-176 / 2-43 |
PF06322.10 | Phage NinH protein | 0.00033 | 15-46 / 12-43 |
PF01710.15 | Transposase | 0.00041 | 17-95 / 16-89 |
PF07141.10 | Putative bacteriophage terminase small subunit | 0.00048 | 15-44 / 27-56 |
PF10654.8 | Protein of unknown function (DUF2481) | 0.00067 | 16-42 / 77-103 |
PF07750.10 | GcrA cell cycle regulator | 0.00073 | 12-46 / 11-46 |
PF07453.12 | NUMOD1 domain | 0.0011 | 17-40 / 17-40 |
PF06056.11 | Putative ATPase subunit of terminase (gpP-like) | 0.0012 | 17-44 / 11-38 |
PF05344.10 | Domain of Unknown Function (DUF746) | 0.0012 | 16-44 / 9-37 |
PF00356.20 | Bacterial regulatory proteins, lacI family | 0.0014 | 21-43 / 1-23 |
PF08671.9 | Anti-repressor SinI | 0.0014 | 175-200 / 2-27 |
PF09607.9 | Brinker DNA-binding domain | 0.0016 | 20-44 / 26-50 |
PF01381.21 | Helix-turn-helix | 0.002 | 17-43 / 7-33 |
PF12116.7 | Stage III sporulation protein D | 0.0021 | 17-43 / 17-43 |
PF08822.10 | Protein of unknown function (DUF1804) | 0.0024 | 17-44 / 17-44 |
PF02954.18 | Bacterial regulatory protein, Fis family | 0.0026 | 17-42 / 14-39 |
PF08535.9 | KorB domain | 0.0027 | 18-46 / 2-30 |
PF13309.5 | HTH domain | 0.0027 | 20-41 / 42-63 |
PF12759.6 | InsA C-terminal domain | 0.0028 | 17-42 / 19-44 |
PF02042.14 | RWP-RK domain | 0.0036 | 16-46 / 9-39 |
PF00292.17 | 'Paired box' domain | 0.0041 | 17-44 / 31-58 |
PF04552.12 | Sigma-54, DNA binding domain | 0.0043 | 16-44 / 45-73 |
PF13413.5 | Helix-turn-helix domain | 0.0043 | 17-43 / 7-33 |
PF04218.12 | CENP-B N-terminal DNA-binding domain | 0.005 | 18-43 / 22-47 |
PF13011.5 | leucine-zipper of insertion element IS481 | 0.0053 | 15-44 / 20-49 |
PF07037.10 | Putative transcription regulator (DUF1323) | 0.0054 | 20-43 / 1-24 |
PF08765.10 | Mor transcription activator family | 0.0055 | 19-44 / 72-97 |
PF06970.10 | Replication initiator protein A (RepA) N-terminus | 0.0057 | 21-42 / 53-74 |
PF06627.10 | Protein of unknown function (DUF1153) | 0.006 | 11-44 / 38-71 |
PF10668.8 | Phage terminase small subunit | 0.0073 | 19-44 / 22-47 |
PF02796.14 | Helix-turn-helix domain of resolvase | 0.0084 | 18-42 / 20-44 |
PF00440.22 | Bacterial regulatory proteins, tetR family | 0.0084 | 20-43 / 16-39 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
K08365 | merR : MerR family transcriptional regulator, mercuric resistance operon regulatory protein | no pathways | 272 | 1 |
K13640 | hspR : MerR family transcriptional regulator, heat shock protein HspR | no pathways | 166 | 1 |
ID | Definition |
---|---|
GO:0019069 | viral capsid assembly |
GO:0006355 | regulation of transcription, DNA-templated |
GO:0043565 | sequence-specific DNA binding |
GO:0006310 | DNA recombination |
GO:0003677 | DNA binding |
GO:0046983 | protein dimerization activity |
GO:0000150 | recombinase activity |
GO:0005524 | ATP binding |