phrog_11967 is made of 8 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
75.62 87 80


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
KX898400_p53 ARB11198.1 hypothetical protein KX898400 Pseudomonas phage JG054 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nipunavirus; unclassified Nipunavirus.
KX898399_p55 ARB11123.1 hypothetical protein KX898399 Pseudomonas phage JG012 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nipunavirus; unclassified Nipunavirus.
NC_031058_p57 YP_009285868.1 hypothetical protein NC_031058 Pseudomonas phage NP1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nipunavirus.
JQ067084_p59 ALH23771.1 hypothetical protein JQ067084 Pseudomonas phage PaMx25 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nipunavirus; Pseudomonas virus PaMx25.
NC_028831_p15 YP_009201558.1 hypothetical protein NC_028831 Escherichia phage slur01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Seuratvirus; unclassified Seuratvirus.
NC_027378_p61 YP_009152005.1 hypothetical protein NC_027378 Escherichia phage Seurat Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Seuratvirus.
NC_028776_p64 YP_009196858.1 hypothetical protein NC_028776 Escherichia phage CAjan Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Seuratvirus.
MG948468_p62 AVJ51817.1 hypothetical protein MG948468 Pantoea phage vB_PagS_Vid5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vidquintavirus; Pantoea virus Vid5.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_3022 47 DNA primase DNA, RNA and nucleotide metabolism 8 1.46E-35 25.96
phrog_20983 4 no annotation unknown function 4 0 1000
phrog_27223 3 no annotation unknown function 3 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_10045 HTH DNA binding protein DNA, RNA and nucleotide metabolism 95.6 0.00045 14-49 / 19-54
phrog_11671 no annotation unknown function 91.4 0.036 12-57 / 4-51
phrog_16311 no annotation unknown function 91.1 0.04 16-44 / 21-51
phrog_2474 MerR-like transcriptional regulator transcription regulation 91.1 0.041 14-44 / 14-44
phrog_4745 DNA binding protein DNA, RNA and nucleotide metabolism 94.4 0.0033 14-58 / 3-54
phrog_575 Cox-like excisionase and repressor integration and excision 94.3 0.004 8-47 / 6-45
phrog_57 terminase small subunit head and packaging 94.2 0.0043 15-43 / 2-30
phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism 95.4 0.00073 12-61 / 11-58
phrog_6620 transposase integration and excision 90.3 0.058 16-46 / 4-33
phrog_66 excisionase and transcriptional regulator integration and excision 96.9 7.3E-06 12-69 / 6-59
phrog_7344 terminase small subunit head and packaging 92.3 0.022 16-47 / 27-55
phrog_7506 recombination directionality factor integration and excision 93.5 0.0093 13-65 / 12-63
phrog_7735 excisionase integration and excision 95.1 0.0012 13-44 / 15-46

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF11112.7 Pyocin activator protein PrtN 2.9E-09 14-67 / 10-69
PF09035.9 Excisionase from transposon Tn916 5.5E-09 12-65 / 10-64
PF06806.11 Putative excisionase (DUF1233) 2.7E-08 14-66 / 6-68
PF01381.21 Helix-turn-helix 6.3E-08 13-43 / 5-35
PF12964.6 Protein of unknown function (DUF3853) 6.6E-08 15-65 / 43-94
PF10078.8 Uncharacterized protein conserved in bacteria (DUF2316) 7.4E-08 5-41 / 11-47
PF05339.10 Protein of unknown function (DUF739) 1.1E-07 8-42 / 7-41
PF10654.8 Protein of unknown function (DUF2481) 1.4E-07 13-41 / 76-104
PF07278.10 Protein of unknown function (DUF1441) 1.7E-07 17-42 / 1-26
PF10743.8 Regulatory phage protein cox 1.7E-07 15-69 / 9-68
PF14590.5 Domain of unknown function (DUF4447) 3.3E-07 5-43 / 8-46
PF12728.6 Helix-turn-helix domain 5.2E-07 18-45 / 2-30
PF05930.11 Prophage CP4-57 regulatory protein (AlpA) 6.9E-07 17-44 / 3-31
PF07825.10 Excisionase-like protein 8.7E-07 18-51 / 3-39
PF13744.5 Helix-turn-helix domain 9E-07 9-41 / 23-55
PF06322.10 Phage NinH protein 9.6E-07 9-43 / 8-42
PF07618.10 Protein of unknown function (DUF1580) 9.5E-07 21-66 / 6-55
PF04645.11 Protein of unknown function, DUF603 9.8E-07 5-44 / 8-50
PF00376.22 MerR family regulatory protein 1.2E-06 19-44 / 1-26
PF13413.5 Helix-turn-helix domain 1.3E-06 12-42 / 4-34
PF13591.5 MerR HTH family regulatory protein 1.3E-06 18-45 / 1-28
PF13443.5 Cro/C1-type HTH DNA-binding domain 1.5E-06 12-40 / 5-34
PF07471.11 Phage DNA packaging protein Nu1 1.5E-06 17-44 / 2-28
PF17443.1 Uncharacterized protein pXO2-72 1.7E-06 15-42 / 6-33
PF12844.6 Helix-turn-helix domain 1.9E-06 13-42 / 8-37
PF07022.12 Bacteriophage CI repressor helix-turn-helix domain 2.5E-06 14-43 / 8-38
PF04936.11 Protein of unknown function (DUF658) 0.00018 16-44 / 87-115
PF13411.5 MerR HTH family regulatory protein 3E-06 19-44 / 2-27
PF08965.9 Domain of unknown function (DUF1870) 3.8E-06 8-42 / 5-41
PF15731.4 Antitoxin component of bacterial toxin-antitoxin system, MqsA 5.2E-06 11-44 / 76-109
PF07750.10 GcrA cell cycle regulator 5.2E-06 13-42 / 14-44
PF07141.10 Putative bacteriophage terminase small subunit 6.3E-06 14-41 / 28-55
PF08535.9 KorB domain 7.8E-06 16-42 / 2-28
PF00356.20 Bacterial regulatory proteins, lacI family 9.5E-06 19-42 / 1-24
PF08667.9 BetR domain 9.5E-06 7-43 / 8-48
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 1.1E-05 15-42 / 11-38
PF04814.12 Hepatocyte nuclear factor 1 (HNF-1), N terminus 1.2E-05 9-42 / 118-151
PF15943.4 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 1.4E-05 19-42 / 10-32
PF12116.7 Stage III sporulation protein D 1.5E-05 14-41 / 16-43
PF04552.12 Sigma-54, DNA binding domain 1.5E-05 14-42 / 45-73
PF02042.14 RWP-RK domain 1.8E-05 12-42 / 7-37
PF13560.5 Helix-turn-helix domain 2.1E-05 9-42 / 6-39
PF05269.10 Bacteriophage CII protein 2.3E-05 14-40 / 20-46
PF05344.10 Domain of Unknown Function (DUF746) 2.4E-05 15-41 / 10-36
PF02954.18 Bacterial regulatory protein, Fis family 2.8E-05 15-39 / 14-38
PF13309.5 HTH domain 2.8E-05 18-38 / 42-62
PF07453.12 NUMOD1 domain 3.1E-05 16-37 / 18-39
PF08765.10 Mor transcription activator family 4.2E-05 16-42 / 71-97
PF08822.10 Protein of unknown function (DUF1804) 4.4E-05 15-40 / 17-42
PF12824.6 Mitochondrial ribosomal protein subunit L20 4.5E-05 17-41 / 107-131
PF00157.16 Pou domain - N-terminal to homeobox domain 7.2E-05 9-40 / 12-49
PF04218.12 CENP-B N-terminal DNA-binding domain 7.6E-05 16-40 / 22-46
PF13693.5 Winged helix-turn-helix DNA-binding 7.5E-05 9-40 / 7-38
PF12759.6 InsA C-terminal domain 7.7E-05 15-40 / 19-44
PF00292.17 'Paired box' domain 7.9E-05 15-41 / 31-57
PF07037.10 Putative transcription regulator (DUF1323) 8.5E-05 18-40 / 1-23
PF06970.10 Replication initiator protein A (RepA) N-terminus 8.7E-05 19-39 / 53-73
PF09607.9 Brinker DNA-binding domain 9.7E-05 18-41 / 26-49
PF14549.5 DNA-binding transcriptional regulator Cro 9.9E-05 12-37 / 5-29
PF02319.19 E2F/DP family winged-helix DNA-binding domain 0.0001 15-40 / 21-46
PF01710.15 Transposase 0.00011 15-41 / 16-42
PF03333.12 Adhesin biosynthesis transcription regulatory protein 0.00011 15-41 / 53-79
PF13011.5 leucine-zipper of insertion element IS481 0.00012 15-41 / 22-48
PF05225.15 helix-turn-helix, Psq domain 0.00014 14-40 / 13-40
PF10668.8 Phage terminase small subunit 0.00015 17-42 / 22-47
PF02796.14 Helix-turn-helix domain of resolvase 0.00017 16-39 / 20-43
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.00018 16-41 / 18-43
PF07506.10 RepB plasmid partitioning protein 0.00017 14-41 / 18-45
PF02376.14 CUT domain 0.0002 8-40 / 11-44
PF13404.5 AsnC-type helix-turn-helix domain 0.00023 15-39 / 15-39
PF01371.18 Trp repressor protein 0.00022 14-42 / 45-73
PF16677.4 DNA-packaging protein gp3 0.00023 15-41 / 27-53
PF07638.10 ECF sigma factor 0.00025 14-40 / 146-172
PF13412.5 Winged helix-turn-helix DNA-binding 0.00026 16-40 / 16-40
PF05331.10 Protein of unknown function (DUF742) 0.00025 16-40 / 52-76
PF13171.5 Protein of unknown function (DUF4004) 0.00024 18-44 / 3-29
PF15978.4 Tn7-like transposition protein D 0.00027 15-40 / 201-226
PF14493.5 Helix-turn-helix domain 0.00028 15-41 / 10-36
PF00440.22 Bacterial regulatory proteins, tetR family 0.0003 18-41 / 16-39
PF13556.5 PucR C-terminal helix-turn-helix domain 0.00033 15-41 / 10-36
PF06971.12 Putative DNA-binding protein N-terminus 0.00033 17-38 / 27-48
PF13936.5 Helix-turn-helix domain 0.00037 15-39 / 18-42
PF06627.10 Protein of unknown function (DUF1153) 0.00036 15-41 / 44-70
PF11242.7 Protein of unknown function (DUF2774) 0.00042 14-40 / 11-37
PF08222.10 CodY helix-turn-helix domain 0.00046 16-40 / 3-27
PF08281.11 Sigma-70, region 4 0.00047 15-40 / 24-49
PF13542.5 Helix-turn-helix domain of transposase family ISL3 0.00049 19-40 / 28-49
PF09048.9 Cro 0.0006 16-42 / 12-38
PF05043.12 Mga helix-turn-helix domain 0.0007 14-40 / 27-53
PF00325.19 Bacterial regulatory proteins, crp family 0.0008 18-39 / 3-24
PF04545.15 Sigma-70, region 4 0.00079 16-40 / 23-47
PF13022.5 Helix-turn-helix of insertion element transposase 0.00079 17-40 / 25-48
PF11427.7 Tc3 transposase 0.00084 15-40 / 18-43
PF13518.5 Helix-turn-helix domain 0.00086 16-41 / 10-35
PF16509.4 TrfB plasmid transcriptional repressor 0.00087 15-40 / 29-54
PF04967.11 HTH DNA binding domain 0.00092 18-40 / 24-46
PF16221.4 winged helix-turn-helix 0.00096 17-40 / 46-69
PF10975.7 Protein of unknown function (DUF2802) 0.001 12-38 / 38-64
PF09012.9 FeoC like transcriptional regulator 0.0012 15-40 / 12-37
PF01527.19 Transposase 0.0012 15-42 / 19-46
PF08279.11 HTH domain 0.0014 16-40 / 14-38
PF09182.9 Bacterial purine repressor, N-terminal 0.0015 15-40 / 18-43
PF01022.19 Bacterial regulatory protein, arsR family 0.0016 16-40 / 15-39
PF12793.6 Sugar transport-related sRNA regulator N-term 0.0017 14-40 / 15-41
PF04492.12 Bacteriophage replication protein O 0.0017 17-40 / 49-72
PF06413.10 Neugrin 0.0017 17-41 / 29-53
PF16264.4 SatD family (SatD) 0.0022 16-41 / 170-195
PF00126.26 Bacterial regulatory helix-turn-helix protein, lysR family 0.0025 18-40 / 12-34
PF01418.16 Helix-turn-helix domain, rpiR family 0.0025 17-40 / 34-57
PF12802.6 MarR family 0.0028 18-40 / 22-44
PF08280.10 M protein trans-acting positive regulator (MGA) HTH domain 0.0028 16-40 / 19-43
PF13384.5 Homeodomain-like domain 0.0031 16-40 / 16-40
PF07900.10 Protein of unknown function (DUF1670) 0.0031 15-40 / 93-118
PF07381.10 Winged helix DNA-binding domain (DUF1495) 0.0032 15-39 / 22-46
PF00196.18 Bacterial regulatory proteins, luxR family 0.0037 15-40 / 15-40
PF04297.13 Putative helix-turn-helix protein, YlxM / p13 like 0.0036 15-41 / 31-57
PF13551.5 Winged helix-turn helix 0.0038 16-41 / 10-35
PF09904.8 Winged helix-turn helix 0.004 15-40 / 19-44
PF07374.10 Protein of unknown function (DUF1492) 0.0046 15-39 / 69-93
PF14056.5 Domain of unknown function (DUF4250) 0.0044 16-41 / 18-43
PF09339.9 IclR helix-turn-helix domain 0.0048 18-40 / 19-41
PF02001.15 Protein of unknown function DUF134 0.0047 15-40 / 45-70
PF15977.4 Winged helix-turn-helix DNA binding 0.005 16-40 / 22-46
PF06530.11 Phage antitermination protein Q 0.005 15-40 / 77-102
PF06892.10 Phage regulatory protein CII (CP76) 0.0051 19-41 / 21-43
PF08221.10 RNA polymerase III subunit RPC82 helix-turn-helix domain 0.0058 15-40 / 25-50
PF11972.7 HTH DNA binding domain 0.0058 15-40 / 11-36
PF00392.20 Bacterial regulatory proteins, gntR family 0.0059 15-40 / 21-47
PF13601.5 Winged helix DNA-binding domain 0.0061 15-40 / 12-37
PF10007.8 Uncharacterized protein conserved in archaea (DUF2250) 0.006 16-40 / 21-45
PF05584.10 Sulfolobus plasmid regulatory protein 0.0074 15-40 / 16-41
PF02082.19 Transcriptional regulator 0.0075 18-40 / 25-47
PF14947.5 Winged helix-turn-helix 0.0076 15-40 / 14-39
PF01047.21 MarR family 0.0078 15-40 / 15-40
PF13463.5 Winged helix DNA-binding domain 0.01 15-40 / 15-40

Annotations of the NCBI proteins of this PHROG


8:hypothetical protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006352 DNA-templated transcription, initiation
GO:0051775 response to redox state
GO:0006355 regulation of transcription, DNA-templated
GO:0005737 cytoplasm
GO:0019069 viral capsid assembly
GO:0060567 negative regulation of DNA-templated transcription, termination
GO:0005524 ATP binding
GO:0005634 nucleus
GO:0043565 sequence-specific DNA binding
GO:0004803 transposase activity
GO:0006260 DNA replication
GO:0045893 positive regulation of transcription, DNA-templated
GO:0005622 intracellular
GO:0016987 sigma factor activity
GO:0005667 transcription factor complex
GO:0045892 negative regulation of transcription, DNA-templated
GO:0003700 DNA binding transcription factor activity
GO:0006313 transposition, DNA-mediated
GO:0000150 recombinase activity
GO:0003677 DNA binding
GO:0006310 DNA recombination

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