Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
156.29 | 162 | 161 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
p201792 | no NCBI prot ID | no annotation | VI_05516 | Betaproteobacteria_gi_149148107_30109_66630 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p201724 | no NCBI prot ID | no annotation | VI_05527 | Betaproteobacteria_gi_149154927_0_36507 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p208949 | no NCBI prot ID | no annotation | VI_01055 | Betaproteobacteria_gi_254195679_253946_289935 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p211715 | no NCBI prot ID | no annotation | VI_05535 | Betaproteobacteria_gi_149160785_618_36269 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p30882 | no NCBI prot ID | no annotation | VI_05533 | Betaproteobacteria_gi_149158964 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p215127 | no NCBI prot ID | no annotation | VI_05572 | Betaproteobacteria_gi_418544760_35653_70831 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p215173 | no NCBI prot ID | no annotation | VI_05573 | Betaproteobacteria_gi_418551753_35655_70833 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_13549 | 7 | no annotation | unknown function | 7 | 0 | 1000 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_13730 | transcriptional repressor | transcription regulation | 95.9 | 0.00024 | 21-102 / 31-118 |
phrog_1373 | transcriptional regulator | transcription regulation | 97.5 | 1.9E-07 | 19-63 / 46-90 |
phrog_1381 | plasmid antitoxin with HTH domain | moron, auxiliary metabolic gene and host takeover | 95.8 | 0.00031 | 19-64 / 25-70 |
phrog_16278 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 91.6 | 0.031 | 10-66 / 7-62 |
phrog_1702 | transcriptional repressor | transcription regulation | 95.6 | 0.00049 | 16-70 / 26-82 |
phrog_18342 | transcriptional repressor | transcription regulation | 92.1 | 0.024 | 15-88 / 28-104 |
phrog_2119 | no annotation | unknown function | 90.3 | 0.057 | 13-51 / 24-62 |
phrog_2328 | transcriptional repressor | transcription regulation | 96.9 | 7.7E-06 | 3-68 / 16-79 |
phrog_2339 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 94.9 | 0.0017 | 19-58 / 39-79 |
phrog_2439 | transcriptional regulator | transcription regulation | 96.9 | 6.8E-06 | 5-105 / 9-111 |
phrog_2967 | transcriptional regulator | transcription regulation | 97.8 | 2.8E-08 | 2-71 / 8-76 |
phrog_3557 | transcriptional regulator | transcription regulation | 90.8 | 0.047 | 21-79 / 29-84 |
phrog_35 | transcriptional repressor | transcription regulation | 96.3 | 7.7E-05 | 15-68 / 11-66 |
phrog_3642 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 96.5 | 3.4E-05 | 6-64 / 10-67 |
phrog_38027 | transcriptional repressor | transcription regulation | 94.7 | 0.0023 | 19-65 / 72-118 |
phrog_3949 | transcriptional repressor | transcription regulation | 96.9 | 7.6E-06 | 18-65 / 29-75 |
phrog_3 | transcriptional repressor | transcription regulation | 97.2 | 1.7E-06 | 3-66 / 4-65 |
phrog_409 | transcriptional regulator | transcription regulation | 91.4 | 0.035 | 13-54 / 6-47 |
phrog_4268 | transcriptional repressor | transcription regulation | 93.4 | 0.0095 | 22-61 / 51-90 |
phrog_4441 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 92.8 | 0.015 | 18-65 / 19-66 |
phrog_4583 | transcriptional repressor | transcription regulation | 98.0 | 5.9E-09 | 18-70 / 24-76 |
phrog_4779 | transcriptional regulator | transcription regulation | 90.3 | 0.058 | 14-57 / 10-56 |
phrog_4 | transcriptional repressor | transcription regulation | 96.3 | 7E-05 | 20-70 / 17-65 |
phrog_5301 | transcriptional repressor | transcription regulation | 92.7 | 0.016 | 4-59 / 6-67 |
phrog_5823 | transcriptional regulator | transcription regulation | 94.9 | 0.0016 | 18-96 / 18-93 |
phrog_6223 | transcriptional repressor | transcription regulation | 94.6 | 0.0028 | 14-43 / 14-43 |
phrog_638 | transcriptional regulator | transcription regulation | 93.6 | 0.0081 | 16-64 / 15-63 |
phrog_6831 | transcriptional regulator | transcription regulation | 95.3 | 0.00087 | 19-52 / 17-52 |
phrog_7241 | transcriptional regulator | transcription regulation | 97.2 | 1.4E-06 | 19-64 / 76-121 |
phrog_769 | transcriptional repressor | transcription regulation | 94.1 | 0.0052 | 21-66 / 29-71 |
phrog_8 | transcriptional regulator | transcription regulation | 97.1 | 2E-06 | 21-72 / 17-67 |
phrog_9103 | transcriptional repressor | transcription regulation | 96.5 | 3.1E-05 | 15-70 / 18-73 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF10078.8 | Uncharacterized protein conserved in bacteria (DUF2316) | 3.5E-08 | 2-64 / 10-76 |
PF07022.12 | Bacteriophage CI repressor helix-turn-helix domain | 1E-07 | 7-67 / 3-61 |
PF13744.5 | Helix-turn-helix domain | 1.2E-07 | 3-64 / 19-79 |
PF01381.21 | Helix-turn-helix | 1.6E-07 | 9-62 / 3-54 |
PF05339.10 | Protein of unknown function (DUF739) | 2.9E-07 | 4-64 / 5-63 |
PF13413.5 | Helix-turn-helix domain | 4E-07 | 8-61 / 2-59 |
PF12844.6 | Helix-turn-helix domain | 4.1E-07 | 6-66 / 3-61 |
PF14590.5 | Domain of unknown function (DUF4447) | 4.3E-07 | 3-66 / 8-72 |
PF04645.11 | Protein of unknown function, DUF603 | 5.4E-07 | 2-65 / 7-68 |
PF15731.4 | Antitoxin component of bacterial toxin-antitoxin system, MqsA | 1.4E-06 | 4-64 / 71-128 |
PF13560.5 | Helix-turn-helix domain | 1.6E-06 | 3-63 / 2-63 |
PF08667.9 | BetR domain | 2.9E-06 | 3-67 / 6-72 |
PF15943.4 | Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT | 4E-06 | 19-66 / 10-57 |
PF13443.5 | Cro/C1-type HTH DNA-binding domain | 4E-06 | 19-65 / 13-61 |
PF05269.10 | Bacteriophage CII protein | 8.2E-06 | 8-66 / 16-70 |
PF08965.9 | Domain of unknown function (DUF1870) | 1E-05 | 4-65 / 3-67 |
PF13693.5 | Winged helix-turn-helix DNA-binding | 1.9E-05 | 5-66 / 5-61 |
PF04814.12 | Hepatocyte nuclear factor 1 (HNF-1), N terminus | 7.6E-05 | 6-57 / 117-166 |
PF00157.16 | Pou domain - N-terminal to homeobox domain | 8.3E-05 | 3-57 / 8-64 |
PF12116.7 | Stage III sporulation protein D | 0.00011 | 14-60 / 18-63 |
PF02376.14 | CUT domain | 0.00013 | 3-66 / 8-68 |
PF14549.5 | DNA-binding transcriptional regulator Cro | 0.00018 | 19-63 / 11-52 |
PF00356.20 | Bacterial regulatory proteins, lacI family | 0.00019 | 19-54 / 1-36 |
PF10654.8 | Protein of unknown function (DUF2481) | 0.00053 | 13-41 / 78-104 |
PF08535.9 | KorB domain | 0.0063 | 15-43 / 3-29 |
PF00376.22 | MerR family regulatory protein | 0.007 | 19-43 / 1-25 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
no KEGG group similar to this PHROG |
ID | Definition |
---|---|
GO:0045893 | positive regulation of transcription, DNA-templated |
GO:0003700 | DNA binding transcription factor activity |
GO:0006355 | regulation of transcription, DNA-templated |
GO:0005634 | nucleus |
GO:0043565 | sequence-specific DNA binding |
GO:0003677 | DNA binding |
GO:0045892 | negative regulation of transcription, DNA-templated |