phrog_13512 is made of 7 protein sequences and is annotated as "transcriptional regulator"
Functional category: transcription regulation


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
175.14 203 178


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p15044 no NCBI prot ID no annotation VI_12104 Gammaproteobacteria_gi_550350159 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p15826 no NCBI prot ID no annotation VI_02972 Gammaproteobacteria_gi_161789109 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p17160 no NCBI prot ID no annotation VI_09489 Gammaproteobacteria_gi_484030090 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p17296 no NCBI prot ID no annotation VI_12016 Gammaproteobacteria_gi_501174973 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_019713_p16 YP_007111862.1 putative transcriptional regulator NC_019713 Vibrio phage vB_VpaS_MAR10 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mardecavirus.
JQ692107_p19 AFE86346.1 putative transcriptional regulator JQ692107 Vibrio phage SSP002 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mardecavirus; Vibrio virus SSP002.
NC_023569_p11 YP_009006412.1 transcriptional regulator NC_023569 Vibrio phage SHOU24 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_3767 38 nucleoid associated protein DNA, RNA and nucleotide metabolism 3 2.70E-15 5.69
phrog_33329 2 no annotation unknown function 2 0 1000
phrog_36518 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_11233 replication initiation protein DNA, RNA and nucleotide metabolism 93.0 0.013 39-84 / 61-106
phrog_2440 transcriptional regulator transcription regulation 96.0 0.00018 10-86 / 15-78
phrog_25401 DNA binding protein DNA, RNA and nucleotide metabolism 91.1 0.041 35-86 / 42-88
phrog_4278 no annotation unknown function 95.8 0.00027 2-85 / 10-88

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF14557.5 Putative AphA-like transcriptional regulator 3.4E-12 3-165 / 5-179
PF03965.15 Penicillinase repressor 9E-09 4-82 / 1-73
PF10007.8 Uncharacterized protein conserved in archaea (DUF2250) 3.3E-08 3-84 / 5-91
PF07381.10 Winged helix DNA-binding domain (DUF1495) 4.3E-08 3-82 / 6-87
PF05584.10 Sulfolobus plasmid regulatory protein 4.7E-08 2-80 / 2-69
PF14394.5 Domain of unknown function (DUF4423) 7.1E-08 5-81 / 20-87
PF04079.15 Segregation and condensation complex subunit ScpB 7.3E-08 3-84 / 80-150
PF02334.15 Replication terminator protein 8.5E-08 8-87 / 20-104
PF11313.7 Protein of unknown function (DUF3116) 1.1E-07 9-86 / 10-82
PF13601.5 Winged helix DNA-binding domain 3E-07 9-87 / 3-73
PF03551.13 Transcriptional regulator PadR-like family 3E-07 18-83 / 12-72
PF04492.12 Bacteriophage replication protein O 3.7E-07 4-62 / 25-84
PF13463.5 Winged helix DNA-binding domain 4.8E-07 5-62 / 2-52
PF12793.6 Sugar transport-related sRNA regulator N-term 6.5E-07 9-87 / 5-76
PF02319.19 E2F/DP family winged-helix DNA-binding domain 1.1E-06 6-61 / 7-57
PF02002.16 TFIIE alpha subunit 1.1E-06 7-86 / 13-84
PF13034.5 Protein of unknown function (DUF3895) 1.2E-06 4-62 / 1-68
PF01090.18 Ribosomal protein S19e 1.3E-06 9-87 / 54-136
PF03428.12 Replication protein C N-terminal domain 1.3E-06 4-63 / 41-107
PF09114.9 Transcription factor MotA, activation domain 1.4E-06 3-87 / 13-82
PF14947.5 Winged helix-turn-helix 2.3E-06 7-86 / 3-71
PF14277.5 Domain of unknown function (DUF4364) 2.9E-06 9-87 / 3-74
PF08221.10 RNA polymerase III subunit RPC82 helix-turn-helix domain 2.9E-06 4-60 / 11-60
PF02295.16 Adenosine deaminase z-alpha domain 3.1E-06 5-61 / 3-53
PF09202.10 Rio2, N-terminal 3.2E-06 3-82 / 3-73
PF09857.8 Putative toxin of bacterial toxin-antitoxin pair 3.3E-06 2-87 / 1-81
PF09639.9 YjcQ protein 3.5E-06 11-86 / 3-83
PF01726.15 LexA DNA binding domain 4.1E-06 2-61 / 2-60
PF01978.18 Sugar-specific transcriptional regulator TrmB 4.7E-06 3-61 / 5-56
PF10711.8 Hypothetical protein (DUF2513) 5.2E-06 8-86 / 7-85
PF07106.12 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) 5.5E-06 8-63 / 3-54
PF01475.18 Ferric uptake regulator family 6E-06 2-63 / 3-63
PF04358.12 DsrC like protein 7.1E-06 3-61 / 36-95
PF09012.9 FeoC like transcriptional regulator 8.8E-06 11-64 / 5-51
PF05158.11 RNA polymerase Rpc34 subunit 8.9E-06 4-62 / 90-143
PF06163.10 Bacterial protein of unknown function (DUF977) 9.9E-06 5-62 / 11-61
PF16221.4 winged helix-turn-helix 1E-05 7-59 / 32-78
PF05732.10 Firmicute plasmid replication protein (RepL) 1E-05 6-61 / 55-109
PF01638.16 HxlR-like helix-turn-helix 1.1E-05 6-85 / 5-76
PF01047.21 MarR family 1.3E-05 5-62 / 2-52
PF12802.6 MarR family 1.3E-05 4-62 / 3-56
PF03444.14 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 1.8E-05 5-83 / 3-74
PF07848.11 PaaX-like protein 2.5E-05 18-61 / 18-57
PF04182.11 B-block binding subunit of TFIIIC 2.6E-05 7-62 / 3-53
PF09904.8 Winged helix-turn helix 2.7E-05 8-60 / 9-54
PF08222.10 CodY helix-turn-helix domain 4.1E-05 19-61 / 3-38
PF13412.5 Winged helix-turn-helix DNA-binding 5E-05 7-57 / 4-47
PF09824.8 ArsR transcriptional regulator 6.2E-05 5-60 / 16-61
PF01316.20 Arginine repressor, DNA binding domain 6.3E-05 4-61 / 3-55
PF01022.19 Bacterial regulatory protein, arsR family 6.7E-05 8-57 / 4-46
PF02082.19 Transcriptional regulator 8.8E-05 10-60 / 12-57
PF12840.6 Helix-turn-helix domain 9.2E-05 4-61 / 6-54
PF09339.9 IclR helix-turn-helix domain 0.00013 9-59 / 6-50
PF10771.8 Winged helix-turn-helix domain (DUF2582) 0.00013 4-62 / 6-57
PF08784.10 Replication protein A C terminal 0.00014 4-61 / 38-95
PF04703.11 FaeA-like protein 0.00016 10-61 / 4-48
PF08461.9 Ribonuclease R winged-helix domain 0.00016 11-60 / 3-50
PF16365.4 Ethanolamine utilization protein EutK C-terminus 0.00021 10-60 / 6-50
PF03297.14 S25 ribosomal protein 0.00024 10-61 / 46-90
PF08535.9 KorB domain 0.00025 20-62 / 3-38
PF08220.11 DeoR-like helix-turn-helix domain 0.00027 10-60 / 4-47
PF01325.18 Iron dependent repressor, N-terminal DNA binding domain 0.00029 18-60 / 19-54
PF10400.8 Virulence activator alpha C-term 0.00033 143-170 / 60-88
PF16864.4 Dimerisation domain 0.00038 7-60 / 19-65
PF05331.10 Protein of unknown function (DUF742) 0.0004 4-61 / 39-87
PF07900.10 Protein of unknown function (DUF1670) 0.00044 18-61 / 93-129
PF06969.15 HemN C-terminal domain 0.0005 9-60 / 9-54
PF01418.16 Helix-turn-helix domain, rpiR family 0.00052 4-60 / 14-67
PF11972.7 HTH DNA binding domain 0.00055 11-57 / 4-40
PF00392.20 Bacterial regulatory proteins, gntR family 0.00085 18-61 / 21-58
PF14338.5 Mrr N-terminal domain 0.001 38-83 / 48-85
PF13404.5 AsnC-type helix-turn-helix domain 0.0013 7-51 / 4-41
PF14502.5 Helix-turn-helix domain 0.0014 19-61 / 5-40
PF00126.26 Bacterial regulatory helix-turn-helix protein, lysR family 0.0019 22-60 / 13-47
PF15977.4 Winged helix-turn-helix DNA binding 0.0019 20-60 / 23-56
PF05043.12 Mga helix-turn-helix domain 0.0021 7-54 / 17-57
PF13545.5 Crp-like helix-turn-helix domain 0.0027 19-59 / 26-59
PF09397.9 Ftsk gamma domain 0.0038 10-61 / 9-53
PF07183.10 Protein of unknown function (DUF1403) 0.0047 7-61 / 275-320
PF16509.4 TrfB plasmid transcriptional repressor 0.0069 6-60 / 18-63
PF00325.19 Bacterial regulatory proteins, crp family 0.0072 22-57 / 4-32
PF11994.7 Protein of unknown function (DUF3489) 0.0073 9-55 / 10-49

Annotations of the NCBI proteins of this PHROG


3:transcriptional regulator

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K10917 K10917, aphA : PadR family transcriptional regulator, regulatory protein AphA ko05111 Vibrio cholerae pathogenic cycle 87 5

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0003700 DNA binding transcription factor activity
GO:0005840 ribosome
GO:0006274 DNA replication termination
GO:0006468 protein phosphorylation
GO:0003677 DNA binding
GO:0003726 double-stranded RNA adenosine deaminase activity
GO:0006383 transcription by RNA polymerase III
GO:0005622 intracellular
GO:0009289 pilus
GO:0006260 DNA replication
GO:0004674 protein serine/threonine kinase activity
GO:0007131 reciprocal meiotic recombination
GO:0005667 transcription factor complex
GO:0045892 negative regulation of transcription, DNA-templated
GO:0006276 plasmid maintenance
GO:0005524 ATP binding
GO:0005666 DNA-directed RNA polymerase III complex
GO:0043565 sequence-specific DNA binding
GO:0006508 proteolysis
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0006355 regulation of transcription, DNA-templated
GO:0051304 chromosome separation
GO:0006525 arginine metabolic process
GO:0006412 translation
GO:0004252 serine-type endopeptidase activity

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