phrog_13787 is made of 7 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
177.57 264 172


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p93169 no NCBI prot ID no annotation VI_01256 Clostridia_gi_547865548 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p142889 no NCBI prot ID no annotation VI_04000 Negativicutes_gi_545446786 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p96113 no NCBI prot ID no annotation VI_06206 Clostridia_gi_307563231_42424_87955 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p96067 no NCBI prot ID no annotation VI_06206 Clostridia_gi_307563231_42424_87955 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p82552 no NCBI prot ID no annotation VI_05771 Clostridia_gi_237643536_35553_83069 Viruses.
p168842 no NCBI prot ID no annotation VI_00460 Bacilli_gi_408784815 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p430996 no NCBI prot ID no annotation VI_05079 Bacilli_gi_481025615 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
no colocalized PHROGS                                                                                          

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_10300 transcriptional regulator transcription regulation 93.8 0.0067 119-164 / 118-163
phrog_11138 no annotation unknown function 97.7 6.4E-08 100-171 / 70-142
phrog_1190 RNA polymerase sigma factor transcription regulation 92.0 0.026 108-168 / 124-185
phrog_14385 no annotation unknown function 90.8 0.046 104-163 / 142-205
phrog_1740 RNA polymerase sigma factor transcription regulation 98.0 9.3E-09 98-170 / 103-176
phrog_248 transcriptional activator transcription regulation 94.5 0.0029 108-171 / 68-135
phrog_2538 terminase small subunit head and packaging 90.6 0.05 121-158 / 3-41
phrog_3512 sigma factor transcription regulation 93.5 0.0087 119-171 / 64-117
phrog_351 RNA polymerase sigma factor transcription regulation 98.0 8.6E-09 72-170 / 130-228
phrog_36 transcriptional regulator transcription regulation 96.9 6.6E-06 106-170 / 74-139
phrog_3855 HTH DNA binding protein DNA, RNA and nucleotide metabolism 92.8 0.015 123-161 / 66-104
phrog_6831 transcriptional regulator transcription regulation 91.8 0.029 127-156 / 6-35

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF07374.10 Protein of unknown function (DUF1492) 5.9E-08 141-196 / 44-100
PF07638.10 ECF sigma factor 6E-08 145-200 / 127-182
PF06530.11 Phage antitermination protein Q 1E-06 145-204 / 56-116
PF03333.12 Adhesin biosynthesis transcription regulatory protein 2.1E-06 145-200 / 33-88
PF05263.10 Protein of unknown function (DUF722) 2.2E-06 140-196 / 70-133
PF05331.10 Protein of unknown function (DUF742) 4E-06 150-194 / 37-80
PF04297.13 Putative helix-turn-helix protein, YlxM / p13 like 7.1E-06 144-203 / 10-69
PF04545.15 Sigma-70, region 4 7.9E-06 149-196 / 2-53
PF02001.15 Protein of unknown function DUF134 1.5E-05 147-203 / 27-83
PF16509.4 TrfB plasmid transcriptional repressor 3.8E-05 144-199 / 8-63
PF16264.4 SatD family (SatD) 3.8E-05 141-200 / 140-204
PF08281.11 Sigma-70, region 4 4.1E-05 145-194 / 4-53
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.00072 152-198 / 3-50
PF04967.11 HTH DNA binding domain 0.0023 168-196 / 24-52
PF11242.7 Protein of unknown function (DUF2774) 0.0024 155-198 / 3-45
PF01371.18 Trp repressor protein 0.0057 146-194 / 20-75
PF12759.6 InsA C-terminal domain 0.0065 162-189 / 16-43
PF04814.12 Hepatocyte nuclear factor 1 (HNF-1), N terminus 0.0072 144-189 / 102-148
PF10654.8 Protein of unknown function (DUF2481) 0.0072 164-200 / 77-113
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0075 167-195 / 23-51
PF07750.10 GcrA cell cycle regulator 0.0084 161-193 / 12-45

Annotations of the NCBI proteins of this PHROG


no RefSeq proteins in this PHROG (only proteins from VirSorter contigs)

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0045893 positive regulation of transcription, DNA-templated
GO:0005622 intracellular
GO:0006352 DNA-templated transcription, initiation
GO:0006355 regulation of transcription, DNA-templated
GO:0016987 sigma factor activity
GO:0060567 negative regulation of DNA-templated transcription, termination
GO:0003700 DNA binding transcription factor activity
GO:0005634 nucleus
GO:0003677 DNA binding

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