phrog_1408 is made of 105 protein sequences and is annotated as "replication initiation protein"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
314.28 430 349


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_031281_p57 YP_009304965.1 HTH DNA-binding protein NC_031281 Mycobacterium phage Panchino Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nclasvirinae; Redivirus.
KX641262_p64 AOT24903.1 HTH DNA binding protein KX641262 Mycobacterium phage Nazo Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Bignuzvirus; unclassified Bignuzvirus.
HM152765_p64 ADL71246.1 hypothetical protein HM152765 Mycobacterium phage Island3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chebruvirinae; Brujitavirus; Mycobacterium virus Brujita.
NC_021302_p61 YP_008051286.1 HTH DNA binding protein NC_021302 Mycobacterium phage Fishburne Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus.
NC_004683_p72 NP_817749.1 gp72 NC_004683 Mycobacterium virus Che9c Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chenonavirus.
NC_023692_p63 YP_009012312.1 hypothetical protein NC_023692 Mycobacterium phage BigNuz Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Bignuzvirus.
NC_023552_p62 YP_009004433.1 HTH DNA binding protein NC_023552 Mycobacterium phage Donovan Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus.
NC_031267_p63 YP_009304322.1 HTH DNA-binding protein NC_031267 Gordonia phage Lucky10 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Luckytenvirus; Gordonia virus Lucky10.
AP018487_p59 BBC53933.1 hypothetical protein AP018487 Mycobacterium phage HC Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chebruvirinae; Brujitavirus; unclassified Brujitavirus.
MF281061_p66 ASR84995.1 HTH DNA binding protein MF281061 Mycobacterium phage Ksquared Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus.
NC_023697_p64 YP_009013081.1 gp64 NC_023697 Mycobacterium virus Babsiella Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chebruvirinae; Brujitavirus.
NC_031243_p61 YP_009302375.1 helix-turn-helix DNA binding domain protein NC_031243 Mycobacterium phage Xeno Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nclasvirinae; Charlievirus.
MF472894_p65 ASZ75324.1 helix-turn-helix DNA binding protein MF472894 Mycobacterium phage Majeke Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus.
NC_011291_p63 YP_002242046.1 gp63 NC_011291 Mycobacterium virus Brujita Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chebruvirinae; Brujitavirus.
p24088 no NCBI prot ID no annotation VI_03504 Gammaproteobacteria_gi_501677485_4270522_4343277 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p33679 no NCBI prot ID no annotation VI_04139 Actinobacteria_gi_484024991 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p159625 no NCBI prot ID no annotation VI_00105 Alphaproteobacteria_gi_484075156_0_39986 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p307140 no NCBI prot ID no annotation VI_10887 Gammaproteobacteria_gi_487410887 Viruses.
p239139 no NCBI prot ID no annotation VI_06559 Gammaproteobacteria_gi_163769699 Viruses.
p98917 no NCBI prot ID no annotation VI_03955 Gammaproteobacteria_gi_15829254_2158693_2203939 Viruses.
p62910 no NCBI prot ID no annotation VI_01527 Gammaproteobacteria_gi_545234203 Viruses.
p19127 no NCBI prot ID no annotation VI_03866 Gammaproteobacteria_gi_254791136_2071901_2148753 Viruses.
p360286 no NCBI prot ID no annotation VI_07885 Gammaproteobacteria_gi_419108938 Viruses.
p20360 no NCBI prot ID no annotation VI_06473 Gammaproteobacteria_gi_208818172_379948_456201 Viruses.
p286208 no NCBI prot ID no annotation VI_06367 Gammaproteobacteria_gi_193071368 Viruses.
p432331 no NCBI prot ID no annotation VI_10418 Gammaproteobacteria_gi_485857124 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p178661 no NCBI prot ID no annotation VI_06546 Gammaproteobacteria_gi_163770041 Viruses.
p320873 no NCBI prot ID no annotation VI_11537 Gammaproteobacteria_gi_545137000 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p346624 no NCBI prot ID no annotation VI_11596 Gammaproteobacteria_gi_545138676 Viruses.
p372396 no NCBI prot ID no annotation VI_06794 Gammaproteobacteria_gi_415781922 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p334260 no NCBI prot ID no annotation VI_07007 Gammaproteobacteria_gi_416331650 Viruses.
p290200 no NCBI prot ID no annotation VI_06516 Gammaproteobacteria_gi_163779992_24677_51811 Viruses.
p375487 no NCBI prot ID no annotation VI_08615 Gammaproteobacteria_gi_420269354 Viruses.
p85836 no NCBI prot ID no annotation VI_01719 Gammaproteobacteria_gi_545274516_941316_988442 Viruses.
p192373 no NCBI prot ID no annotation VI_10738 Gammaproteobacteria_gi_486739307 Viruses.
p436625 no NCBI prot ID no annotation VI_06542 Gammaproteobacteria_gi_163779619 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p363113 no NCBI prot ID no annotation VI_09371 Gammaproteobacteria_gi_421823769 Viruses.
p19224 no NCBI prot ID no annotation VI_03253 Gammaproteobacteria_gi_209395693_2072925_2149772 Viruses.
p335644 no NCBI prot ID no annotation VI_07870 Gammaproteobacteria_gi_419097729 Viruses.
p10493 no NCBI prot ID no annotation VI_06522 Gammaproteobacteria_gi_163779816 Viruses.
p315760 no NCBI prot ID no annotation VI_06493 Gammaproteobacteria_gi_163780322_0_23906 Viruses.
p406572 no NCBI prot ID no annotation VI_08665 Gammaproteobacteria_gi_420310033 Viruses.
p429441 no NCBI prot ID no annotation VI_07528 Gammaproteobacteria_gi_474515220 Viruses.
p96678 no NCBI prot ID no annotation VI_11108 Gammaproteobacteria_gi_487669602 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Lambdavirus; unclassified Lambdavirus.
p91804 no NCBI prot ID no annotation VI_02958 Gammaproteobacteria_gi_510916172 Viruses.
p377486 no NCBI prot ID no annotation VI_11609 Gammaproteobacteria_gi_545138888 Viruses.
p27900 no NCBI prot ID no annotation VI_03821 Gammaproteobacteria_gi_16445223_1861227_1930146 Viruses.
p349873 no NCBI prot ID no annotation VI_07999 Gammaproteobacteria_gi_419226066 Viruses.
p366150 no NCBI prot ID no annotation VI_11501 Gammaproteobacteria_gi_545136127 Viruses.
p320177 no NCBI prot ID no annotation VI_06536 Gammaproteobacteria_gi_163779594_4805_28211 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p308014 no NCBI prot ID no annotation VI_06481 Gammaproteobacteria_gi_163780544_0_24839 Viruses.
p251391 no NCBI prot ID no annotation VI_08653 Gammaproteobacteria_gi_420303886 Viruses.
p275672 no NCBI prot ID no annotation VI_10713 Gammaproteobacteria_gi_486410510 Viruses.
p397962 no NCBI prot ID no annotation VI_09382 Gammaproteobacteria_gi_421830672 Viruses.
p29780 no NCBI prot ID no annotation VI_06476 Gammaproteobacteria_gi_163780522_10_67058 Viruses.
p302273 no NCBI prot ID no annotation VI_07114 Gammaproteobacteria_gi_417126178_106036_131708 Viruses.
p237309 no NCBI prot ID no annotation VI_01564 Gammaproteobacteria_gi_545239141_0_33077 Viruses.
p250512 no NCBI prot ID no annotation VI_08265 Gammaproteobacteria_gi_452721421 Viruses.
p365117 no NCBI prot ID no annotation VI_08673 Gammaproteobacteria_gi_420314965 Viruses.
p412363 no NCBI prot ID no annotation VI_07799 Gammaproteobacteria_gi_419050506 Viruses.
p220296 no NCBI prot ID no annotation VI_06503 Gammaproteobacteria_gi_163780172_27411_62213 Viruses.
p388050 no NCBI prot ID no annotation VI_11529 Gammaproteobacteria_gi_545136846 Viruses.
p275780 no NCBI prot ID no annotation VI_10761 Gammaproteobacteria_gi_490017889 Viruses.
p327624 no NCBI prot ID no annotation VI_07877 Gammaproteobacteria_gi_419103541 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Enterobacteria phage YYZ-2008.
p395074 no NCBI prot ID no annotation VI_07809 Gammaproteobacteria_gi_419056632 Viruses.
p360822 no NCBI prot ID no annotation VI_08624 Gammaproteobacteria_gi_420275219 Viruses.
p191372 no NCBI prot ID no annotation VI_06468 Gammaproteobacteria_gi_208817245 Viruses.
p274935 no NCBI prot ID no annotation VI_10756 Gammaproteobacteria_gi_487138491 Viruses.
p376751 no NCBI prot ID no annotation VI_07849 Gammaproteobacteria_gi_419085758 Viruses.
p377104 no NCBI prot ID no annotation VI_07166 Gammaproteobacteria_gi_417234041 Viruses.
p58373 no NCBI prot ID no annotation VI_06517 Gammaproteobacteria_gi_163779995 Viruses.
p359910 no NCBI prot ID no annotation VI_08628 Gammaproteobacteria_gi_420280393 Viruses.
p322096 no NCBI prot ID no annotation VI_06995 Gammaproteobacteria_gi_416323414_32369_55577 Viruses.
p280164 no NCBI prot ID no annotation VI_11582 Gammaproteobacteria_gi_545138335 Viruses.
p434184 no NCBI prot ID no annotation VI_10450 Gammaproteobacteria_gi_485875016 Viruses.
p94657 no NCBI prot ID no annotation VI_11089 Gammaproteobacteria_gi_487653831 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p89719 no NCBI prot ID no annotation VI_03228 Gammaproteobacteria_gi_554496898_27242_73632 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p408806 no NCBI prot ID no annotation VI_10878 Gammaproteobacteria_gi_514076114 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p388591 no NCBI prot ID no annotation VI_08461 Gammaproteobacteria_gi_420034666 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p165733 no NCBI prot ID no annotation VI_08244 Gammaproteobacteria_gi_419763800_481928_521392 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
p387472 no NCBI prot ID no annotation VI_08439 Gammaproteobacteria_gi_420011577 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p387799 no NCBI prot ID no annotation VI_08414 Gammaproteobacteria_gi_419982761 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p388376 no NCBI prot ID no annotation VI_08477 Gammaproteobacteria_gi_420051870 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p256998 no NCBI prot ID no annotation VI_12079 Gammaproteobacteria_gi_429120722_15556_46820 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p384606 no NCBI prot ID no annotation VI_08505 Gammaproteobacteria_gi_420085889 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p155700 no NCBI prot ID no annotation VI_12074 Gammaproteobacteria_gi_429100003_1878114_1918393 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p387248 no NCBI prot ID no annotation VI_08429 Gammaproteobacteria_gi_420000072 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p147188 no NCBI prot ID no annotation VI_03286 Gammaproteobacteria_gi_556243487_2774713_2815853 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p384368 no NCBI prot ID no annotation VI_08434 Gammaproteobacteria_gi_420005829 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p374771 no NCBI prot ID no annotation VI_12084 Gammaproteobacteria_gi_421912220 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
p391484 no NCBI prot ID no annotation VI_08445 Gammaproteobacteria_gi_420017516 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p397369 no NCBI prot ID no annotation VI_08409 Gammaproteobacteria_gi_419977031 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
p164558 no NCBI prot ID no annotation VI_09443 Gammaproteobacteria_gi_490364168 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p389005 no NCBI prot ID no annotation VI_08482 Gammaproteobacteria_gi_420057541 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p387979 no NCBI prot ID no annotation VI_08487 Gammaproteobacteria_gi_420063193 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p383924 no NCBI prot ID no annotation VI_08466 Gammaproteobacteria_gi_420040347 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p388619 no NCBI prot ID no annotation VI_08471 Gammaproteobacteria_gi_420046060 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p388324 no NCBI prot ID no annotation VI_08455 Gammaproteobacteria_gi_420028834 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p381335 no NCBI prot ID no annotation VI_08492 Gammaproteobacteria_gi_420068969 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
NC_031077_p47 YP_009287775.1 putative primosomal protein NC_031077 Enterobacter phage Tyrion Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus; unclassified Uetakevirus.
p388295 no NCBI prot ID no annotation VI_08418 Gammaproteobacteria_gi_419988412 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p391454 no NCBI prot ID no annotation VI_08501 Gammaproteobacteria_gi_420080618 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p150701 no NCBI prot ID no annotation VI_03921 Gammaproteobacteria_gi_565643472_2014841_2055599 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p387725 no NCBI prot ID no annotation VI_08424 Gammaproteobacteria_gi_419994263 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
p389056 no NCBI prot ID no annotation VI_08450 Gammaproteobacteria_gi_420023105 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_109 843 P-like helicase loader DNA, RNA and nucleotide metabolism 85 3.69E-203 193.55
phrog_163 607 CII-like transcriptional activator transcription regulation 57 1.18E-133 124.05
phrog_1081 138 no annotation unknown function 24 5.42E-65 55.39
phrog_3599 40 no annotation unknown function 13 1.83E-41 31.86
phrog_2451 60 no annotation unknown function 9 2.60E-26 16.71
phrog_29572 2 no annotation unknown function 2 0 1000
phrog_37051 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_1032 replication initiation protein DNA, RNA and nucleotide metabolism 99.4 2.3E-17 201-276 / 188-262
phrog_12556 replication initiation protein DNA, RNA and nucleotide metabolism 98.8 5.1E-12 2-105 / 5-96
phrog_13103 no annotation unknown function 93.1 0.013 201-268 / 188-255
phrog_15931 no annotation unknown function 100.0 3.2E-85 135-349 / 4-217
phrog_16167 replication initiation protein DNA, RNA and nucleotide metabolism 99.7 1.5E-20 1-274 / 4-272
phrog_1701 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 95.6 0.0005 1-105 / 4-98
phrog_17247 no annotation unknown function 99.0 3.6E-13 2-121 / 5-108
phrog_21423 no annotation unknown function 100.0 1.9E-39 1-154 / 1-153
phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 99.9 7.6E-32 1-121 / 3-114
phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 95.8 0.00025 205-257 / 213-260
phrog_2509 replication initiation protein DNA, RNA and nucleotide metabolism 99.8 5.5E-25 174-277 / 148-251
phrog_25711 no annotation unknown function 93.1 0.012 1-118 / 6-111
phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 94.7 0.0024 3-117 / 8-106
phrog_3729 replication initiation protein DNA, RNA and nucleotide metabolism 100.0 1.5E-36 1-158 / 1-150
phrog_3992 primosomal protein DNA, RNA and nucleotide metabolism 100.0 7.2E-42 163-349 / 144-335
phrog_5810 replication initiation protein DNA, RNA and nucleotide metabolism 94.7 0.0022 31-122 / 29-120
phrog_6451 primosomal protein DNA, RNA and nucleotide metabolism 95.8 0.00031 201-267 / 170-245
phrog_8064 replication initiation protein DNA, RNA and nucleotide metabolism 92.5 0.019 2-103 / 5-94

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF09681.9 N-terminal phage replisome organiser (Phage_rep_org_N) 2.7E-07 21-119 / 1-103
PF06970.10 Replication initiator protein A (RepA) N-terminus 5.6E-07 21-90 / 2-75
PF04492.12 Bacteriophage replication protein O 0.00034 17-100 / 5-83
PF14297.5 Domain of unknown function (DUF4373) 0.0085 21-99 / 1-81

Annotations of the NCBI proteins of this PHROG


5:hypothetical protein 4:HTH DNA binding protein 2:HTH DNA-binding protein 1:protein of an unannotated phage 1:helix-turn-helix DNA binding protein 1:helix-turn-helix DNA binding domain protein 1:primosomal protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K02317 dnaT : DNA replication protein DnaT ko03440 Homologous recombination 138 3

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006260 DNA replication

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