phrog_15118 is made of 6 protein sequences and is annotated as "HTH DNA binding protein"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
130.17 133 131


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_030941_p32 YP_009276491.1 HTH DNA binding domain protein NC_030941 Gordonia phage Cozz Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Emalynvirus; Gordonia virus Cozz.
NC_031234_p35 YP_009301476.1 HTH DNA-binding domain protein NC_031234 Gordonia phage Emalyn Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Emalynvirus; Gordonia virus Emalyn.
NC_015720_p29 YP_004678799.1 hypothetical protein NC_015720 Gordonia phage GTE2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Emalynvirus; Gordonia virus GTE2.
MG770215_p34 AUV60740.1 HTH DNA-binding domain protein MG770215 Gordonia phage Troje Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Emalynvirus; Gordonia virus Troje.
NC_021063_p35 YP_007869959.1 hypothetical protein NC_021063 Mycobacterium phage vB_MapS_FF47 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mapvirus.
NC_022054_p34 YP_008408920.1 HTH domain protein NC_022054 Mycobacterium phage Muddy Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mapvirus.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_26548 3 no annotation unknown function 3 0 1000
phrog_16498 6 no annotation unknown function 2 5.76E-15 5.36

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_3865 no annotation unknown function 90.9 0.045 2-26 / 26-50

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF13591.5 MerR HTH family regulatory protein 5.6E-09 1-61 / 1-60
PF08876.10 Domain of unknown function (DUF1836) 8.9E-09 2-70 / 12-84
PF13411.5 MerR HTH family regulatory protein 1.1E-08 1-63 / 1-63
PF11112.7 Pyocin activator protein PrtN 1.2E-07 1-48 / 14-66
PF12964.6 Protein of unknown function (DUF3853) 3.2E-07 1-48 / 46-93
PF09035.9 Excisionase from transposon Tn916 7E-07 1-48 / 16-63
PF05930.11 Prophage CP4-57 regulatory protein (AlpA) 7.3E-07 1-45 / 4-49
PF16701.4 Adenylate cyclase regulatory domain 1.4E-06 1-68 / 59-124
PF07825.10 Excisionase-like protein 1.9E-06 1-44 / 3-48
PF00376.22 MerR family regulatory protein 3.1E-06 2-26 / 1-25
PF10743.8 Regulatory phage protein cox 6.8E-06 1-48 / 12-63
PF06806.11 Putative excisionase (DUF1233) 7.3E-06 1-48 / 10-66
PF12728.6 Helix-turn-helix domain 1.2E-05 1-46 / 2-46
PF17443.1 Uncharacterized protein pXO2-72 1.3E-05 1-24 / 9-32
PF07278.10 Protein of unknown function (DUF1441) 1.6E-05 1-25 / 2-26
PF04936.11 Protein of unknown function (DUF658) 0.0029 2-27 / 90-115
PF07618.10 Protein of unknown function (DUF1580) 2.4E-05 5-48 / 7-53
PF07471.11 Phage DNA packaging protein Nu1 2.9E-05 1-47 / 3-52
PF10654.8 Protein of unknown function (DUF2481) 0.00052 1-23 / 81-103
PF07141.10 Putative bacteriophage terminase small subunit 0.00069 2-24 / 33-55
PF07453.12 NUMOD1 domain 0.00084 2-20 / 21-39
PF00356.20 Bacterial regulatory proteins, lacI family 0.001 2-24 / 1-23
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 0.0011 1-24 / 14-37
PF06322.10 Phage NinH protein 0.0014 2-24 / 18-40
PF13309.5 HTH domain 0.0015 2-22 / 43-63
PF09607.9 Brinker DNA-binding domain 0.0017 2-24 / 27-49
PF01381.21 Helix-turn-helix 0.0018 2-23 / 11-32
PF02954.18 Bacterial regulatory protein, Fis family 0.0018 2-22 / 18-38
PF06970.10 Replication initiator protein A (RepA) N-terminus 0.0018 2-22 / 53-73
PF04552.12 Sigma-54, DNA binding domain 0.0021 1-24 / 49-72
PF08535.9 KorB domain 0.0022 1-24 / 4-27
PF05344.10 Domain of Unknown Function (DUF746) 0.0024 2-24 / 14-36
PF13413.5 Helix-turn-helix domain 0.0025 2-23 / 11-32
PF07037.10 Putative transcription regulator (DUF1323) 0.0025 1-23 / 1-23
PF13171.5 Protein of unknown function (DUF4004) 0.0026 2-68 / 4-75
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0031 2-24 / 25-47
PF08765.10 Mor transcription activator family 0.0033 2-24 / 74-96
PF00292.17 'Paired box' domain 0.0034 2-24 / 35-57
PF08822.10 Protein of unknown function (DUF1804) 0.0034 2-24 / 21-43
PF12759.6 InsA C-terminal domain 0.0035 2-23 / 23-44
PF01710.15 Transposase 0.0038 2-24 / 20-42
PF02796.14 Helix-turn-helix domain of resolvase 0.0041 2-22 / 23-43
PF13011.5 leucine-zipper of insertion element IS481 0.0046 2-24 / 26-48
PF13542.5 Helix-turn-helix domain of transposase family ISL3 0.0046 3-23 / 29-49
PF10078.8 Uncharacterized protein conserved in bacteria (DUF2316) 0.0046 1-24 / 24-47
PF13412.5 Winged helix-turn-helix DNA-binding 0.0052 2-24 / 19-41
PF02042.14 RWP-RK domain 0.0054 2-24 / 14-36
PF00440.22 Bacterial regulatory proteins, tetR family 0.0054 2-23 / 17-38
PF07750.10 GcrA cell cycle regulator 0.0058 1-25 / 19-44
PF13936.5 Helix-turn-helix domain 0.0062 2-22 / 22-42
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.0066 2-24 / 21-43
PF13404.5 AsnC-type helix-turn-helix domain 0.0073 2-22 / 19-39
PF06971.12 Putative DNA-binding protein N-terminus 0.0073 2-21 / 29-48
PF10668.8 Phage terminase small subunit 0.0077 2-24 / 24-46
PF05225.15 helix-turn-helix, Psq domain 0.0082 2-24 / 18-41
PF13556.5 PucR C-terminal helix-turn-helix domain 0.0084 2-24 / 14-36
PF14493.5 Helix-turn-helix domain 0.0089 2-24 / 14-36

Annotations of the NCBI proteins of this PHROG


2:hypothetical protein 2:HTH DNA-binding domain protein 1:HTH domain protein 1:HTH DNA binding domain protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0043565 sequence-specific DNA binding
GO:0003677 DNA binding
GO:0006310 DNA recombination
GO:0000150 recombinase activity
GO:0005524 ATP binding
GO:0045892 negative regulation of transcription, DNA-templated
GO:0019069 viral capsid assembly
GO:0051775 response to redox state
GO:0005737 cytoplasm
GO:0006355 regulation of transcription, DNA-templated

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