phrog_16040 is made of 6 protein sequences and is annotated as "virion structural protein"
Functional category: head and packaging


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
1020.33 1713 1272


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p286929 no NCBI prot ID no annotation VI_00447 Bacilli_gi_251833405 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_019486_p17 YP_007003217.1 tail fiber NC_019486 Lactobacillus phage LF1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p100906 no NCBI prot ID no annotation VI_04801 Bacilli_gi_377556685 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p158977 no NCBI prot ID no annotation VI_00951 Bacilli_gi_512594165 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p260737 no NCBI prot ID no annotation VI_04800 Bacilli_gi_377556631 Viruses.
p138109 no NCBI prot ID no annotation VI_04450 Bacilli_gi_325681573 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_326 378 tail protein with endopeptidase domain other 6 7.18E-22 12.27
phrog_10610 10 no annotation unknown function 2 1.63E-13 3.91

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_1210 PblB-type receptor binding other 95.2 0.0011 507-919 / 1518-1916(1917)
phrog_12329 virion structural protein head and packaging 94.7 0.0024 513-657 / 638-780
phrog_1330 tail protein tail 98.0 7.5E-09 321-577 / 465-772
phrog_16267 no annotation unknown function 94.3 0.0039 557-589 / 1250-1282(1920)
phrog_1699 long tail fiber protein distal subunit tail 90.7 0.048 820-919 / 933-1031(1040)
phrog_1775 minor head protein head and packaging 94.6 0.0026 826-912 / 1227-1309(1353)
phrog_1786 minor head protein head and packaging 95.5 0.00059 388-443 / 739-794
phrog_18190 no annotation unknown function 92.6 0.018 543-669 / 395-526
phrog_1899 no annotation unknown function 98.0 5.8E-09 533-656 / 291-425
phrog_19445 tail tip protein Tal head and packaging 96.7 1.8E-05 497-657 / 577-706
phrog_1980 tail fiber protein tail 94.9 0.0017 813-919 / 367-477
phrog_35520 tail protein tail 98.2 1.9E-09 820-918 / 519-614
phrog_5555 tail protein tail 95.8 0.00031 815-918 / 646-761
phrog_5667 long tail fiber protein distal subunit tail 90.7 0.048 766-919 / 591-742
phrog_5668 tail fiber protein tail 96.8 9.3E-06 818-919 / 29-125
phrog_6616 tail protein tail 93.5 0.0093 826-912 / 718-822
phrog_7660 tail fiber protein tail 99.1 2.3E-14 788-916 / 924-1051(1070)
phrog_9757 no annotation unknown function 95.5 0.00055 188-341 / 99-225

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF07888.10 Calcium binding and coiled-coil domain (CALCOCO1) like 8.4E-11 492-536 / 449-493
PF15921.4 Coiled-coil domain-containing protein 158 1.2E-10 53-73 / 66-86
PF15818.4 Coiled-coil domain-containing protein 73 family 1.7E-10 236-259 / 29-52
PF15254.5 Coiled-coil domain-containing protein 14 4E-08 232-261 / 333-367
PF09726.8 Macoilin family 7.5E-07 235-289 / 378-432
PF07111.11 Alpha helical coiled-coil rod protein (HCR) 1.7E-09 237-252 / 258-273
PF05622.11 HOOK protein 4.3E-09 241-264 / 177-200
PF15964.4 Centrosomal colon cancer autoantigen protein family 1.6E-08 43-56 / 16-29
PF12128.7 Protein of unknown function (DUF3584) 6.6E-09 56-67 / 28-39
PF00261.19 Tropomyosin 5.7E-07 239-279 / 12-52
PF12761.6 Actin cytoskeleton-regulatory complex protein END3 1.6E-08 177-218 / 1-38
PF06637.10 PV-1 protein (PLVAP) 0.00014 317-351 / 59-93
PF09730.8 Microtubule-associated protein Bicaudal-D 0.001 570-580 / 171-181
PF05483.11 Synaptonemal complex protein 1 (SCP-1) 6.3E-07 234-253 / 404-423
PF04582.11 Reovirus sigma C capsid protein 1.3E-06 236-264 / 29-57
PF05667.10 Protein of unknown function (DUF812) 1.3E-06 34-46 / 28-40
PF15934.4 Yuri gagarin 3.8E-06 396-427 / 114-145
PF15742.4 Domain of unknown function (DUF4686) 3.9E-06 300-314 / 19-33
PF17078.4 SWI5-dependent HO expression protein 3 4.4E-06 237-284 / 5-52
PF14915.5 CCDC144C protein coiled-coil region 5E-06 339-351 / 33-45
PF09755.8 Uncharacterized conserved protein H4 (DUF2046) 0.0039 335-354 / 21-40
PF09311.10 Rabaptin-like protein 8E-05 309-341 / 9-41
PF00038.20 Intermediate filament protein 9.9E-05 321-351 / 9-39
PF13884.5 Chaperone of endosialidase 0.00011 1256-1312 / 1-55
PF07058.10 Microtubule-associated protein 70 0.00067 566-585 / 227-246
PF10481.8 Cenp-F N-terminal domain 0.00016 236-271 / 19-54
PF05911.10 Filament-like plant protein, long coiled-coil 0.0013 565-579 / 860-874
PF08317.10 Spc7 kinetochore protein 0.00039 237-261 / 70-94
PF02463.18 RecF/RecN/SMC N terminal domain 0.00041 56-67 / 33-44
PF14662.5 Coiled-coil region of CCDC155 or KASH 0.00066 409-459 / 4-54
PF15967.4 Nucleoporin FG repeated region 0.00078 390-401 / 253-264
PF07902.10 gp58-like protein 0.00096 1002-1063 / 304-363
PF12718.6 Tropomyosin like 0.0019 263-278 / 35-50
PF08614.10 Autophagy protein 16 (ATG16) 0.0019 240-255 / 85-100
PF09787.8 Golgin subfamily A member 5 0.0022 235-268 / 46-79
PF10212.8 Predicted coiled-coil domain-containing protein 0.0075 518-585 / 451-513
PF12763.6 Cytoskeletal-regulatory complex EF hand 0.0066 128-197 / 13-79
PF15619.5 Ciliary protein causing Leber congenital amaurosis disease 0.0083 239-250 / 15-26

Annotations of the NCBI proteins of this PHROG


1:tail fiber

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0007098 centrosome cycle
GO:0030154 cell differentiation
GO:0005515 protein binding
GO:0007030 Golgi organization
GO:0005813 centrosome
GO:0051028 mRNA transport
GO:0048309 endoplasmic reticulum inheritance
GO:0006897 endocytosis
GO:0070840 dynein complex binding
GO:0008017 microtubule binding
GO:0007130 synaptonemal complex assembly
GO:0007015 actin filament organization
GO:0008093 cytoskeletal adaptor activity
GO:0007010 cytoskeleton organization
GO:0016021 integral component of membrane
GO:0000795 synaptonemal complex

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