phrog_16982 is made of 5 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
143 143 143


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
KM983333_p10 AJA42896.1 hypothetical protein KM983333 Clostridium phage phiCTC2A Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_028991_p11 YP_009216655.1 hypothetical protein NC_028991 Clostridium phage phiCT453A Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_030950_p10 YP_009277284.1 hypothetical protein NC_030950 Clostridium phage phiCT19406A Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KM983330_p10 AJA42700.1 hypothetical protein KM983330 Clostridium phage phiCT19406A Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_030949_p10 YP_009277217.1 hypothetical protein NC_030949 Clostridium phage phiCTC2A Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_15837 6 no annotation unknown function 5 2.85E-31 21.67
phrog_434 299 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 4 9.85E-16 6.13

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_11013 no annotation unknown function 99.9 3.9E-27 56-133 / 5-83
phrog_323 transcriptional regulator, D5-like transcription regulation 90.1 0.062 79-128 / 46-95
phrog_7199 RNA polymerase DNA, RNA and nucleotide metabolism 99.8 1.3E-24 1-59 / 1-59

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF01710.15 Transposase 0.0096 96-123 / 17-44
PF08822.10 Protein of unknown function (DUF1804) 0.0093 96-123 / 18-45
PF00292.17 'Paired box' domain 0.007 83-123 / 18-59
PF04936.11 Protein of unknown function (DUF658) 4.5E-09 39-124 / 14-115
PF04552.12 Sigma-54, DNA binding domain 2.4E-06 23-65 / 30-74
PF07750.10 GcrA cell cycle regulator 0.00024 83-124 / 3-46
PF13011.5 leucine-zipper of insertion element IS481 6.6E-06 37-67 / 22-52
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 0.0085 96-125 / 12-41
PF12759.6 InsA C-terminal domain 0.0016 96-121 / 20-45
PF07141.10 Putative bacteriophage terminase small subunit 0.0036 88-122 / 21-56
PF15978.4 Tn7-like transposition protein D 3.8E-05 24-67 / 187-231
PF09607.9 Brinker DNA-binding domain 0.005 98-123 / 26-51
PF05344.10 Domain of Unknown Function (DUF746) 7.9E-05 36-66 / 9-39
PF07900.10 Protein of unknown function (DUF1670) 0.00011 38-122 / 94-177
PF13411.5 MerR HTH family regulatory protein 0.00013 41-64 / 2-25
PF05331.10 Protein of unknown function (DUF742) 0.0069 96-129 / 52-85
PF06627.10 Protein of unknown function (DUF1153) 0.00018 25-68 / 31-75
PF03333.12 Adhesin biosynthesis transcription regulatory protein 0.00019 25-63 / 41-79
PF10668.8 Phage terminase small subunit 0.0002 39-68 / 22-51
PF07638.10 ECF sigma factor 0.00022 23-63 / 133-173
PF14493.5 Helix-turn-helix domain 0.00024 35-68 / 8-41
PF11427.7 Tc3 transposase 0.00026 37-64 / 18-45
PF13542.5 Helix-turn-helix domain of transposase family ISL3 0.00026 32-63 / 20-50
PF12824.6 Mitochondrial ribosomal protein subunit L20 0.0033 80-121 / 86-131
PF16087.4 Domain of unknown function (DUF4817) 0.00029 36-67 / 13-52
PF13518.5 Helix-turn-helix domain 0.00032 38-68 / 10-40
PF10654.8 Protein of unknown function (DUF2481) 0.00031 32-62 / 73-103
PF02796.14 Helix-turn-helix domain of resolvase 0.0058 96-119 / 20-43
PF13936.5 Helix-turn-helix domain 0.00035 36-61 / 17-42
PF06322.10 Phage NinH protein 0.0004 38-65 / 15-42
PF13551.5 Winged helix-turn helix 0.00042 37-68 / 9-40
PF08765.10 Mor transcription activator family 0.00049 32-64 / 66-97
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0087 98-121 / 24-47
PF13309.5 HTH domain 0.00071 40-60 / 42-62
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.00075 38-64 / 18-44
PF16509.4 TrfB plasmid transcriptional repressor 0.0008 28-64 / 20-56
PF01527.19 Transposase 0.00095 38-64 / 20-46
PF09824.8 ArsR transcriptional regulator 0.001 23-71 / 13-60
PF13412.5 Winged helix-turn-helix DNA-binding 0.0064 97-125 / 17-45
PF10975.7 Protein of unknown function (DUF2802) 0.0012 27-60 / 31-64
PF08281.11 Sigma-70, region 4 0.0013 36-63 / 23-50
PF04545.15 Sigma-70, region 4 0.0014 38-63 / 23-48
PF02954.18 Bacterial regulatory protein, Fis family 0.0014 39-62 / 16-39
PF16677.4 DNA-packaging protein gp3 0.0015 38-63 / 28-53
PF13384.5 Homeodomain-like domain 0.0016 37-63 / 15-41
PF06530.11 Phage antitermination protein Q 0.0017 26-63 / 66-103
PF02319.19 E2F/DP family winged-helix DNA-binding domain 0.0022 96-130 / 22-56
PF08535.9 KorB domain 0.0019 39-67 / 3-31
PF17443.1 Uncharacterized protein pXO2-72 0.0019 40-63 / 9-32
PF05225.15 helix-turn-helix, Psq domain 0.0022 38-63 / 15-41
PF01371.18 Trp repressor protein 0.0024 35-64 / 44-73
PF11242.7 Protein of unknown function (DUF2774) 0.0025 36-65 / 11-40
PF01381.21 Helix-turn-helix 0.0027 38-62 / 8-32
PF07453.12 NUMOD1 domain 0.0028 40-59 / 20-39
PF06413.10 Neugrin 0.0026 40-62 / 30-52
PF07374.10 Protein of unknown function (DUF1492) 0.0029 28-62 / 60-94
PF13556.5 PucR C-terminal helix-turn-helix domain 0.0031 39-65 / 12-38
PF02001.15 Protein of unknown function DUF134 0.003 23-63 / 31-71
PF12802.6 MarR family 0.0034 40-69 / 22-51
PF04297.13 Putative helix-turn-helix protein, YlxM / p13 like 0.0042 25-63 / 19-57
PF06806.11 Putative excisionase (DUF1233) 0.0046 40-61 / 10-31
PF00376.22 MerR family regulatory protein 0.0051 42-62 / 2-22
PF11112.7 Pyocin activator protein PrtN 0.005 40-62 / 14-37
PF00356.20 Bacterial regulatory proteins, lacI family 0.0056 42-62 / 2-22
PF00325.19 Bacterial regulatory proteins, crp family 0.0061 40-63 / 3-26
PF13404.5 AsnC-type helix-turn-helix domain 0.0062 39-63 / 17-41
PF05930.11 Prophage CP4-57 regulatory protein (AlpA) 0.0072 40-61 / 4-25
PF08222.10 CodY helix-turn-helix domain 0.0095 97-129 / 4-36
PF08004.10 Protein of unknown function (DUF1699) 0.0068 27-60 / 92-129
PF02042.14 RWP-RK domain 0.0085 39-63 / 12-36
PF13591.5 MerR HTH family regulatory protein 0.0089 41-62 / 2-23
PF06970.10 Replication initiator protein A (RepA) N-terminus 0.0089 41-62 / 53-74
PF07278.10 Protein of unknown function (DUF1441) 0.009 40-63 / 2-25
PF16221.4 winged helix-turn-helix 0.009 97-127 / 46-76
PF13413.5 Helix-turn-helix domain 0.0094 38-62 / 8-32

Annotations of the NCBI proteins of this PHROG


5:hypothetical protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0043565 sequence-specific DNA binding
GO:0004803 transposase activity
GO:0003677 DNA binding
GO:0006310 DNA recombination
GO:0003700 DNA binding transcription factor activity
GO:0005524 ATP binding
GO:0000150 recombinase activity
GO:0006313 transposition, DNA-mediated
GO:0016987 sigma factor activity
GO:0019069 viral capsid assembly
GO:0005667 transcription factor complex
GO:0060567 negative regulation of DNA-templated transcription, termination
GO:0006352 DNA-templated transcription, initiation
GO:0005622 intracellular
GO:0006355 regulation of transcription, DNA-templated

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