ID |
Definition |
Evalue |
posQ/posS |
PF04358.12 |
DsrC like protein |
3.1E-18 |
4-109 / 2-107 |
PF01726.15 |
LexA DNA binding domain |
1.3E-06 |
42-97 / 7-60 |
PF04492.12 |
Bacteriophage replication protein O |
2E-06 |
37-97 / 23-83 |
PF16221.4 |
winged helix-turn-helix |
3.1E-06 |
42-95 / 32-78 |
PF08784.10 |
Replication protein A C terminal |
5E-06 |
38-97 / 37-95 |
PF10007.8 |
Uncharacterized protein conserved in archaea (DUF2250) |
8.4E-06 |
39-98 / 6-57 |
PF08221.10 |
RNA polymerase III subunit RPC82 helix-turn-helix domain |
8.6E-06 |
39-96 / 11-60 |
PF03965.15 |
Penicillinase repressor |
9E-06 |
41-98 / 3-58 |
PF09114.9 |
Transcription factor MotA, activation domain |
1.1E-05 |
37-97 / 12-65 |
PF02319.19 |
E2F/DP family winged-helix DNA-binding domain |
1.3E-05 |
59-96 / 22-56 |
PF01090.18 |
Ribosomal protein S19e |
2.2E-05 |
59-98 / 64-115 |
PF09012.9 |
FeoC like transcriptional regulator |
2.6E-05 |
60-99 / 14-50 |
PF14394.5 |
Domain of unknown function (DUF4423) |
3E-05 |
42-97 / 22-72 |
PF05732.10 |
Firmicute plasmid replication protein (RepL) |
3.2E-05 |
38-97 / 51-109 |
PF04079.15 |
Segregation and condensation complex subunit ScpB |
3.3E-05 |
37-98 / 79-129 |
PF02295.16 |
Adenosine deaminase z-alpha domain |
3.4E-05 |
60-97 / 18-53 |
PF14557.5 |
Putative AphA-like transcriptional regulator |
3.6E-05 |
38-98 / 5-68 |
PF03428.12 |
Replication protein C N-terminal domain |
3.6E-05 |
36-97 / 38-105 |
PF07381.10 |
Winged helix DNA-binding domain (DUF1495) |
4.1E-05 |
39-97 / 7-68 |
PF05584.10 |
Sulfolobus plasmid regulatory protein |
5.1E-05 |
60-97 / 18-52 |
PF14277.5 |
Domain of unknown function (DUF4364) |
5.2E-05 |
59-96 / 14-52 |
PF01978.18 |
Sugar-specific transcriptional regulator TrmB |
5.6E-05 |
39-98 / 6-57 |
PF01325.18 |
Iron dependent repressor, N-terminal DNA binding domain |
5.7E-05 |
59-96 / 20-54 |
PF12802.6 |
MarR family |
5.7E-05 |
61-98 / 22-56 |
PF03444.14 |
Winged helix-turn-helix transcription repressor, HrcA DNA-binding |
5.8E-05 |
60-97 / 24-58 |
PF13730.5 |
Helix-turn-helix domain |
5.9E-05 |
39-93 / 3-52 |
PF01475.18 |
Ferric uptake regulator family |
6.3E-05 |
38-98 / 4-62 |
PF02082.19 |
Transcriptional regulator |
6.5E-05 |
61-97 / 25-58 |
PF13463.5 |
Winged helix DNA-binding domain |
7.4E-05 |
59-97 / 16-51 |
PF13601.5 |
Winged helix DNA-binding domain |
7.5E-05 |
59-98 / 13-49 |
PF05158.11 |
RNA polymerase Rpc34 subunit |
8.3E-05 |
38-98 / 89-143 |
PF08222.10 |
CodY helix-turn-helix domain |
8.6E-05 |
60-97 / 4-38 |
PF04182.11 |
B-block binding subunit of TFIIIC |
0.00011 |
59-98 / 17-53 |
PF06163.10 |
Bacterial protein of unknown function (DUF977) |
0.00011 |
41-97 / 12-60 |
PF01047.21 |
MarR family |
0.00011 |
60-98 / 17-52 |
PF11313.7 |
Protein of unknown function (DUF3116) |
0.00012 |
61-98 / 21-62 |
PF02002.16 |
TFIIE alpha subunit |
0.00013 |
42-98 / 13-61 |
PF07848.11 |
PaaX-like protein |
0.00013 |
59-97 / 19-57 |
PF09202.10 |
Rio2, N-terminal |
0.00017 |
39-97 / 4-58 |
PF12793.6 |
Sugar transport-related sRNA regulator N-term |
0.00018 |
59-97 / 17-52 |
PF15977.4 |
Winged helix-turn-helix DNA binding |
0.00018 |
60-97 / 23-57 |
PF09639.9 |
YjcQ protein |
0.00021 |
60-98 / 16-53 |
PF12840.6 |
Helix-turn-helix domain |
0.00021 |
41-97 / 8-54 |
PF07106.12 |
Tat binding protein 1(TBP-1)-interacting protein (TBPIP) |
0.00023 |
45-97 / 5-52 |
PF01418.16 |
Helix-turn-helix domain, rpiR family |
0.00027 |
38-102 / 13-73 |
PF05491.12 |
Holliday junction DNA helicase ruvB C-terminus |
0.00028 |
39-97 / 6-60 |
PF01022.19 |
Bacterial regulatory protein, arsR family |
0.00029 |
60-93 / 16-46 |
PF14947.5 |
Winged helix-turn-helix |
0.00036 |
59-96 / 15-49 |
PF09339.9 |
IclR helix-turn-helix domain |
0.00039 |
61-96 / 19-51 |
PF03551.13 |
Transcriptional regulator PadR-like family |
0.0004 |
59-98 / 13-51 |
PF09904.8 |
Winged helix-turn helix |
0.00041 |
59-95 / 20-53 |
PF13412.5 |
Winged helix-turn-helix DNA-binding |
0.00041 |
61-93 / 18-47 |
PF09857.8 |
Putative toxin of bacterial toxin-antitoxin pair |
0.00047 |
39-97 / 3-63 |
PF16365.4 |
Ethanolamine utilization protein EutK C-terminus |
0.00049 |
60-96 / 17-50 |
PF02334.15 |
Replication terminator protein |
0.00057 |
60-99 / 31-76 |
PF14502.5 |
Helix-turn-helix domain |
0.00064 |
60-97 / 6-40 |
PF01638.16 |
HxlR-like helix-turn-helix |
0.00071 |
59-98 / 18-55 |
PF10711.8 |
Hypothetical protein (DUF2513) |
0.00072 |
61-98 / 19-57 |
PF16864.4 |
Dimerisation domain |
0.00072 |
43-96 / 20-65 |
PF07900.10 |
Protein of unknown function (DUF1670) |
0.00081 |
59-98 / 94-130 |
PF00392.20 |
Bacterial regulatory proteins, gntR family |
0.00093 |
60-97 / 23-58 |
PF06969.15 |
HemN C-terminal domain |
0.0011 |
60-96 / 20-54 |
PF08220.11 |
DeoR-like helix-turn-helix domain |
0.0012 |
60-97 / 14-48 |
PF13545.5 |
Crp-like helix-turn-helix domain |
0.0012 |
60-96 / 27-60 |
PF09824.8 |
ArsR transcriptional regulator |
0.0015 |
40-97 / 16-62 |
PF04703.11 |
FaeA-like protein |
0.0016 |
60-97 / 14-48 |
PF05331.10 |
Protein of unknown function (DUF742) |
0.002 |
60-100 / 53-90 |
PF08461.9 |
Ribonuclease R winged-helix domain |
0.0025 |
61-97 / 13-51 |
PF03297.14 |
S25 ribosomal protein |
0.0028 |
59-96 / 55-89 |
PF08535.9 |
KorB domain |
0.0029 |
61-96 / 4-36 |
PF00126.26 |
Bacterial regulatory helix-turn-helix protein, lysR family |
0.0041 |
62-96 / 13-47 |
PF09681.9 |
N-terminal phage replisome organiser (Phage_rep_org_N) |
0.0043 |
61-96 / 54-86 |
PF00325.19 |
Bacterial regulatory proteins, crp family |
0.0046 |
62-93 / 4-32 |
PF08820.9 |
Domain of unknown function (DUF1803) |
0.0059 |
59-105 / 25-67 |
PF08279.11 |
HTH domain |
0.0069 |
60-91 / 15-43 |