Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
268.8 | 278 | 267 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
p205501 | no NCBI prot ID | no annotation | VI_03162 | Gammaproteobacteria_gi_553796934_415_36568 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
p205450 | no NCBI prot ID | no annotation | VI_03161 | Gammaproteobacteria_gi_553796931_415_36568 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
p59858 | no NCBI prot ID | no annotation | VI_05661 | Betaproteobacteria_gi_487495181 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p367408 | no NCBI prot ID | no annotation | VI_06639 | Gammaproteobacteria_gi_261496959 | Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses. |
p344064 | no NCBI prot ID | no annotation | VI_05611 | Betaproteobacteria_gi_433475550_69948_90645 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae; Haemophilus phage SuMu. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_293 | 423 | ABC transporter | moron, auxiliary metabolic gene and host takeover | 1 | 0 | 1000 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_1373 | transcriptional regulator | transcription regulation | 94.6 | 0.0026 | 12-66 / 36-91 |
phrog_2104 | no annotation | unknown function | 90.6 | 0.05 | 12-47 / 50-85 |
phrog_2328 | transcriptional repressor | transcription regulation | 96.5 | 2.9E-05 | 5-70 / 13-79 |
phrog_2439 | transcriptional regulator | transcription regulation | 94.4 | 0.0037 | 8-71 / 7-71 |
phrog_2967 | transcriptional regulator | transcription regulation | 94.8 | 0.002 | 5-71 / 6-74 |
phrog_3 | transcriptional repressor | transcription regulation | 94.8 | 0.0021 | 8-68 / 4-65 |
phrog_463 | anti-repressor | transcription regulation | 91.3 | 0.036 | 158-196 / 181-219 |
phrog_4836 | CII-like regulator | transcription regulation | 96.3 | 6.8E-05 | 6-78 / 81-154 |
phrog_4 | transcriptional repressor | transcription regulation | 93.3 | 0.011 | 9-74 / 5-67 |
phrog_5825 | no annotation | unknown function | 96.2 | 0.00011 | 110-260 / 20-163 |
phrog_8 | transcriptional regulator | transcription regulation | 95.0 | 0.0014 | 8-72 / 2-65 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF10552.8 | ORF6C domain | 1.4E-08 | 159-200 / 64-105 |
PF10078.8 | Uncharacterized protein conserved in bacteria (DUF2316) | 2.1E-05 | 6-69 / 7-77 |
PF06252.11 | Protein of unknown function (DUF1018) | 5.3E-05 | 169-266 / 9-113 |
PF14590.5 | Domain of unknown function (DUF4447) | 6E-05 | 6-72 / 4-74 |
PF07022.12 | Bacteriophage CI repressor helix-turn-helix domain | 6.6E-05 | 14-72 / 3-62 |
PF13744.5 | Helix-turn-helix domain | 7.4E-05 | 8-68 / 17-79 |
PF04645.11 | Protein of unknown function, DUF603 | 8.7E-05 | 4-70 / 2-69 |
PF05339.10 | Protein of unknown function (DUF739) | 0.00014 | 11-68 / 5-63 |
PF01381.21 | Helix-turn-helix | 0.00014 | 16-66 / 3-54 |
PF12844.6 | Helix-turn-helix domain | 0.0002 | 14-70 / 4-61 |
PF13443.5 | Cro/C1-type HTH DNA-binding domain | 0.00022 | 14-70 / 2-62 |
PF13413.5 | Helix-turn-helix domain | 0.00036 | 15-65 / 2-59 |
PF05269.10 | Bacteriophage CII protein | 0.00045 | 7-71 / 6-71 |
PF08667.9 | BetR domain | 0.00065 | 7-73 / 3-74 |
PF15731.4 | Antitoxin component of bacterial toxin-antitoxin system, MqsA | 0.00071 | 10-68 / 70-128 |
PF13560.5 | Helix-turn-helix domain | 0.00075 | 10-67 / 2-63 |
PF15943.4 | Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT | 0.0011 | 17-70 / 4-57 |
PF08965.9 | Domain of unknown function (DUF1870) | 0.0042 | 11-50 / 3-44 |
PF13693.5 | Winged helix-turn-helix DNA-binding | 0.0047 | 12-70 / 5-61 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
no KEGG group similar to this PHROG |
ID | Definition |
---|---|
GO:0006355 | regulation of transcription, DNA-templated |
GO:0045892 | negative regulation of transcription, DNA-templated |
GO:0003677 | DNA binding |
GO:0043565 | sequence-specific DNA binding |