phrog_1877 is made of 81 protein sequences and is annotated as "DNA binding protein"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
133.07 149 130


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p335797 no NCBI prot ID no annotation VI_05987 Clostridia_gi_545003308_33321_54980 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p111331 no NCBI prot ID no annotation VI_06154 Clostridia_gi_545051677_47472_91850 Viruses.
p168278 no NCBI prot ID no annotation VI_06182 Clostridia_gi_545062049_522710_561922 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Lubbockvirus; Clostridium virus phiC2.
p361560 no NCBI prot ID no annotation VI_05847 Clostridia_gi_544961837 Viruses.
p60766 no NCBI prot ID no annotation VI_01287 Clostridia_gi_260685375_1674440_1726202 Viruses.
p256183 no NCBI prot ID no annotation VI_05875 Clostridia_gi_544970532_47617_78949 Viruses.
p407072 no NCBI prot ID no annotation VI_06179 Clostridia_gi_545061697 Viruses.
LN681534_p47 CEK40258.1 DNA binding domain, excisionase family LN681534 Clostridium phage phiCD24-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p257976 no NCBI prot ID no annotation VI_05936 Clostridia_gi_544990174 Viruses.
p414607 no NCBI prot ID no annotation VI_06063 Clostridia_gi_545030500 Viruses.
p218305 no NCBI prot ID no annotation VI_06019 Clostridia_gi_545017658_12536_47566 Viruses.
p60636 no NCBI prot ID no annotation VI_01206 Clostridia_gi_224514679_1605411_1657174 Viruses.
p425871 no NCBI prot ID no annotation VI_06018 Clostridia_gi_545017454 Viruses.
p383729 no NCBI prot ID no annotation VI_06173 Clostridia_gi_545054567 Viruses.
p175924 no NCBI prot ID no annotation VI_05890 Clostridia_gi_544975200_8040_46525 Viruses.
p71025 no NCBI prot ID no annotation VI_01141 Clostridia_gi_423083325_47386_96905 Viruses.
p76193 no NCBI prot ID no annotation VI_01143 Clostridia_gi_423088052_47090_95461 Viruses.
p372340 no NCBI prot ID no annotation VI_05950 Clostridia_gi_544994757 Viruses.
p372481 no NCBI prot ID no annotation VI_06181 Clostridia_gi_545061917 Viruses.
p63849 no NCBI prot ID no annotation VI_06082 Clostridia_gi_545034271_47463_98238 Viruses.
p335556 no NCBI prot ID no annotation VI_06145 Clostridia_gi_545050421 Viruses.
p350811 no NCBI prot ID no annotation VI_06027 Clostridia_gi_545019489_10107_29800 Viruses.
p250646 no NCBI prot ID no annotation VI_06134 Clostridia_gi_545047928_47470_79268 Viruses.
p320958 no NCBI prot ID no annotation VI_06037 Clostridia_gi_545020459 Viruses.
p266098 no NCBI prot ID no annotation VI_06152 Clostridia_gi_545051184_570387_600909 Viruses.
p260145 no NCBI prot ID no annotation VI_05830 Clostridia_gi_544953209 Viruses.
p173318 no NCBI prot ID no annotation VI_06199 Clostridia_gi_550130350 Viruses.
p260031 no NCBI prot ID no annotation VI_05900 Clostridia_gi_544978902 Viruses.
p93111 no NCBI prot ID no annotation VI_06067 Clostridia_gi_545030798_10084_55949 Viruses.
p379350 no NCBI prot ID no annotation VI_06142 Clostridia_gi_545050181 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p258662 no NCBI prot ID no annotation VI_06132 Clostridia_gi_545047080_76197_107291 Viruses.
p247074 no NCBI prot ID no annotation VI_06202 Clostridia_gi_550143617 Viruses.
p241881 no NCBI prot ID no annotation VI_06117 Clostridia_gi_545043069_10111_42759 Viruses.
p245000 no NCBI prot ID no annotation VI_05976 Clostridia_gi_545000730_12518_44765 Viruses.
p246307 no NCBI prot ID no annotation VI_05989 Clostridia_gi_545003911_10129_42312 Viruses.
p322804 no NCBI prot ID no annotation VI_05849 Clostridia_gi_544963344_8075_31204 Viruses.
p362496 no NCBI prot ID no annotation VI_06085 Clostridia_gi_545035115 Viruses.
p313689 no NCBI prot ID no annotation VI_06140 Clostridia_gi_545049814 Viruses.
p254401 no NCBI prot ID no annotation VI_06159 Clostridia_gi_545053316_232170_263640 Viruses.
p56596 no NCBI prot ID no annotation VI_01286 Clostridia_gi_260681769_1676815_1730339 Viruses.
p189795 no NCBI prot ID no annotation VI_06060 Clostridia_gi_545026636_0_37230 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p80926 no NCBI prot ID no annotation VI_05954 Clostridia_gi_544995858_10095_57803 Viruses.
p80544 no NCBI prot ID no annotation VI_06002 Clostridia_gi_545013623_10105_57898 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p56238 no NCBI prot ID no annotation VI_06006 Clostridia_gi_545013926_10497_64120 Viruses.
p60096 no NCBI prot ID no annotation VI_06170 Clostridia_gi_545054357_103769_155846 Viruses.
p60701 no NCBI prot ID no annotation VI_01205 Clostridia_gi_224514686_1668856_1720618 Viruses.
p60896 no NCBI prot ID no annotation VI_01204 Clostridia_gi_224531476_1620964_1672725 Viruses.
p147952 no NCBI prot ID no annotation VI_05846 Clostridia_gi_544960801_10072_51160 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p60961 no NCBI prot ID no annotation VI_01207 Clostridia_gi_224514680_1625520_1677280 Viruses.
p147103 no NCBI prot ID no annotation VI_06120 Clostridia_gi_545043553_176308_217460 Viruses.
p188255 no NCBI prot ID no annotation VI_05863 Clostridia_gi_544968674_10083_47528 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p245585 no NCBI prot ID no annotation VI_01208 Clostridia_gi_224514672_1722306_1754535 Viruses.
p241925 no NCBI prot ID no annotation VI_06115 Clostridia_gi_545042574_12492_45139 Viruses.
p108607 no NCBI prot ID no annotation VI_06012 Clostridia_gi_545015022_228245_273032 Viruses.
p329586 no NCBI prot ID no annotation VI_06200 Clostridia_gi_550135422_47288_69589 Viruses.
p417377 no NCBI prot ID no annotation VI_06080 Clostridia_gi_545034157 Viruses.
p343180 no NCBI prot ID no annotation VI_05962 Clostridia_gi_544997337_10177_31046 Viruses.
p60831 no NCBI prot ID no annotation VI_01300 Clostridia_gi_383843669_1686592_1738353 Viruses.
p262882 no NCBI prot ID no annotation VI_06057 Clostridia_gi_545025285 Viruses.
p309386 no NCBI prot ID no annotation VI_05994 Clostridia_gi_545004842_8006_32727 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p316797 no NCBI prot ID no annotation VI_06048 Clostridia_gi_545022922_47477_71257 Viruses.
p61027 no NCBI prot ID no annotation VI_01313 Clostridia_gi_383843666_1670235_1721988 Viruses.
p96613 no NCBI prot ID no annotation VI_01203 Clostridia_gi_209401276_1065214_1110658 Viruses.
p412790 no NCBI prot ID no annotation VI_06111 Clostridia_gi_545042015 Viruses.
p393647 no NCBI prot ID no annotation VI_05928 Clostridia_gi_544989019 Viruses.
p389962 no NCBI prot ID no annotation VI_06023 Clostridia_gi_545018837 Viruses.
p278671 no NCBI prot ID no annotation VI_06084 Clostridia_gi_545034554_49445_78215 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p331836 no NCBI prot ID no annotation VI_05991 Clostridia_gi_545004609_6980_29020 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p47666 no NCBI prot ID no annotation VI_05997 Clostridia_gi_545013016_49294_107666 Viruses.
p412185 no NCBI prot ID no annotation VI_05948 Clostridia_gi_544994035 Viruses.
KX228400_p51 ANT45194.1 hypothetical protein KX228400 Clostridium phage CDKM15 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Lubbockvirus; unclassified Lubbockvirus.
p95426 no NCBI prot ID no annotation VI_06130 Clostridia_gi_545045010_49019_94601 Viruses.
NC_028883_p58 YP_009206176.1 hypothetical protein NC_028883 Clostridium phage phiMMP01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Lubbockvirus; unclassified Lubbockvirus.
KX228399_p54 ANT45122.1 hypothetical protein KX228399 Clostridium phage CDKM9 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Lubbockvirus; unclassified Lubbockvirus.
p339009 no NCBI prot ID no annotation VI_05959 Clostridia_gi_544996720_26564_47833 Viruses.
p321295 no NCBI prot ID no annotation VI_05980 Clostridia_gi_545002097_8761_32058 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Lubbockvirus.
p318880 no NCBI prot ID no annotation VI_06050 Clostridia_gi_545023148_49570_73115 Viruses.
NC_028959_p61 YP_009214241.1 hypothetical protein NC_028959 Clostridium phage phiMMP03 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Lubbockvirus; unclassified Lubbockvirus.
DQ466086_p56 ABE99519.1 hypothetical protein DQ466086 Clostridium virus phiC2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Lubbockvirus.
NC_009231_p56 YP_001110774.1 hypothetical protein NC_009231 Clostridium virus phiC2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Lubbockvirus.
p391891 no NCBI prot ID no annotation VI_06035 Clostridia_gi_545020338_7753_22812 Viruses.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_2047 73 no annotation unknown function 62 5.12E-232 222.41
phrog_3 3832 transcriptional repressor transcription regulation 59 3.48E-99 89.58
phrog_9209 12 no annotation unknown function 12 0 1000
phrog_4222 33 no annotation unknown function 7 9.90E-24 14.13
phrog_11749 9 no annotation unknown function 7 6.44E-30 20.31
phrog_13923 7 no annotation unknown function 5 1.79E-22 12.87
phrog_35211 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism 94.4 0.0034 6-110 / 3-86
phrog_66 excisionase and transcriptional regulator integration and excision 95.9 0.00023 57-113 / 6-63
phrog_7338 no annotation unknown function 90.3 0.057 11-110 / 7-80

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF11112.7 Pyocin activator protein PrtN 4E-10 75-130 / 9-71
PF12964.6 Protein of unknown function (DUF3853) 2.9E-09 76-127 / 42-95
PF07618.10 Protein of unknown function (DUF1580) 5.3E-09 79-128 / 2-56
PF06806.11 Putative excisionase (DUF1233) 8.8E-09 76-128 / 6-69
PF10743.8 Regulatory phage protein cox 4.4E-08 76-133 / 8-71
PF09035.9 Excisionase from transposon Tn916 5.6E-08 76-129 / 12-67
PF07825.10 Excisionase-like protein 1.1E-07 79-129 / 2-54
PF12728.6 Helix-turn-helix domain 1.5E-07 79-128 / 1-51
PF13591.5 MerR HTH family regulatory protein 8.4E-07 80-125 / 1-46
PF07471.11 Phage DNA packaging protein Nu1 1.5E-06 79-131 / 2-59
PF05930.11 Prophage CP4-57 regulatory protein (AlpA) 2E-06 78-125 / 2-52
PF07278.10 Protein of unknown function (DUF1441) 9.2E-06 80-129 / 2-51
PF17443.1 Uncharacterized protein pXO2-72 1.2E-05 76-104 / 5-33
PF13411.5 MerR HTH family regulatory protein 2.2E-05 80-125 / 1-48
PF00376.22 MerR family regulatory protein 0.00019 81-107 / 1-27
PF04936.11 Protein of unknown function (DUF658) 0.0073 78-109 / 87-118
PF08876.10 Domain of unknown function (DUF1836) 0.00064 77-123 / 8-61
PF13171.5 Protein of unknown function (DUF4004) 0.0011 79-130 / 2-60
PF16701.4 Adenylate cyclase regulatory domain 0.0047 78-120 / 57-99
PF07453.12 NUMOD1 domain 0.0071 77-100 / 17-40

Annotations of the NCBI proteins of this PHROG


6:hypothetical protein 1:DNA binding domain, excisionase family

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006355 regulation of transcription, DNA-templated
GO:0003677 DNA binding
GO:0006310 DNA recombination

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