phrog_1889 is made of 80 protein sequences and is annotated as "terminase small subunit"
Functional category: head and packaging


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
256.62 388 274


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p363276 no NCBI prot ID no annotation VI_05842 Clostridia_gi_544957317 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
KX228400_p1 ANT45144.1 terminase small subunit KX228400 Clostridium phage CDKM15 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Lubbockvirus; unclassified Lubbockvirus.
p252170 no NCBI prot ID no annotation VI_06129 Clostridia_gi_545044940 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p281893 no NCBI prot ID no annotation VI_06131 Clostridia_gi_545045045 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p375465 no NCBI prot ID no annotation VI_01284 Clostridia_gi_550502754 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Lubbockvirus; Clostridium virus phiCD119.
p233516 no NCBI prot ID no annotation VI_06008 Clostridia_gi_545014294_51839_85347 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p74303 no NCBI prot ID no annotation VI_05996 Clostridia_gi_545011147_110641_159417 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p74220 no NCBI prot ID no annotation VI_05979 Clostridia_gi_545001079_51887_100663 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p236071 no NCBI prot ID no annotation VI_06003 Clostridia_gi_545013813_51851_85068 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p114412 no NCBI prot ID no annotation VI_05832 Clostridia_gi_544954104 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p54357 no NCBI prot ID no annotation VI_01307 Clostridia_gi_485075759_38224_92961 Viruses.
p12717 no NCBI prot ID no annotation VI_00425 Bacilli_gi_423502290 Viruses.
p53628 no NCBI prot ID no annotation VI_00422 Bacilli_gi_423490892 Viruses.
p12686 no NCBI prot ID no annotation VI_00424 Bacilli_gi_423496617 Viruses.
p12616 no NCBI prot ID no annotation VI_00424 Bacilli_gi_423496617 Viruses.
p33979 no NCBI prot ID no annotation VI_01128 Clostridia_gi_545413440 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p27261 no NCBI prot ID no annotation VI_01252 Clostridia_gi_547850312 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p32546 no NCBI prot ID no annotation VI_05770 Clostridia_gi_537985678_1655908_1720767 Viruses.
p397479 no NCBI prot ID no annotation VI_04485 Bacilli_gi_289567086 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p361719 no NCBI prot ID no annotation VI_05433 Bacilli_gi_565634353 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Enterococcus phage phiEf11.
p396768 no NCBI prot ID no annotation VI_04484 Bacilli_gi_289567068 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p278280 no NCBI prot ID no annotation VI_00936 Bacilli_gi_522836897 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
MG711466_p51 AUV56764.1 putative terminase small subunit MG711466 Faecalibacterium phage FP_Toutatis Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Toutatisvirus; Faecalibacterium virus Toutatis.
p221399 no NCBI prot ID no annotation VI_01165 Clostridia_gi_313116189 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p24184 no NCBI prot ID no annotation VI_01162 Clostridia_gi_211596814 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p40397 no NCBI prot ID no annotation VI_04047 unknown_gi_547191751 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae; Vibrio phage X29.
p53044 no NCBI prot ID no annotation VI_05150 Bacilli_gi_484070739 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
GQ478082_p38 ACZ63798.1 terminase small subunit GQ478082 Enterococcus phage phiFL1B Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phifelvirus; Enterococcus virus FL1.
NC_009813_p1 YP_001468705.1 TerS NC_009813 Listeria phage B054 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p43384 no NCBI prot ID no annotation VI_00474 Bacilli_gi_397738354 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p181022 no NCBI prot ID no annotation VI_00569 Bacilli_gi_501611608_959869_997959 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_013646_p38 YP_003347495.1 terminase small subunit NC_013646 Enterococcus phage phiFL1A Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phifelvirus.
p50900 no NCBI prot ID no annotation VI_00885 Bacilli_gi_485455564 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p181078 no NCBI prot ID no annotation VI_00592 Bacilli_gi_502238181_1032628_1070718 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
GQ478083_p44 ACZ63867.1 terminase small subunit GQ478083 Enterococcus phage phiFL1C Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phifelvirus; Enterococcus virus FL1.
p289005 no NCBI prot ID no annotation VI_00935 Bacilli_gi_522836830 Viruses.
p201668 no NCBI prot ID no annotation VI_04436 Bacilli_gi_294622454 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p341075 no NCBI prot ID no annotation VI_04430 Bacilli_gi_294614749 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p43460 no NCBI prot ID no annotation VI_04569 Bacilli_gi_485455588 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p140106 no NCBI prot ID no annotation VI_00481 Bacilli_gi_500219249_340805_382586 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p324829 no NCBI prot ID no annotation VI_05374 Bacilli_gi_545607155_0_22835 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p286066 no NCBI prot ID no annotation VI_00932 Bacilli_gi_522836732 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p235717 no NCBI prot ID no annotation VI_00931 Bacilli_gi_522836561 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p294061 no NCBI prot ID no annotation VI_00112 Bacilli_gi_545378051 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p294204 no NCBI prot ID no annotation VI_05312 Bacilli_gi_510929231 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p361055 no NCBI prot ID no annotation VI_06092 Clostridia_gi_545037317 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p57517 no NCBI prot ID no annotation VI_05239 Bacilli_gi_433547270 Viruses.
p201913 no NCBI prot ID no annotation VI_00597 Bacilli_gi_502303887_108605_145100 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p348858 no NCBI prot ID no annotation VI_04514 Bacilli_gi_485038661 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p207996 no NCBI prot ID no annotation VI_00547 Bacilli_gi_501076900_1001297_1037319 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p77380 no NCBI prot ID no annotation VI_04384 Bacilli_gi_300765818 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae; Listeria phage B054.
p145844 no NCBI prot ID no annotation VI_00813 Bacilli_gi_242364291_479779_521001 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Enterococcus phage phiEf11.
p356922 no NCBI prot ID no annotation VI_01173 Clostridia_gi_237642775 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
GQ478087_p44 ACZ64127.1 terminase GQ478087 Enterococcus phage phiFL3B Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phifelvirus; Enterococcus virus FL3.
p204879 no NCBI prot ID no annotation VI_00811 Bacilli_gi_239948585_620256_656470 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p319974 no NCBI prot ID no annotation VI_04857 Bacilli_gi_484086256 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p199428 no NCBI prot ID no annotation VI_00918 Bacilli_gi_522835488_106286_142974 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p256322 no NCBI prot ID no annotation VI_00818 Bacilli_gi_242355652_20677_52016 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p128346 no NCBI prot ID no annotation VI_00590 Bacilli_gi_502206344_994950_1037475 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Enterococcus phage phiEf11.
p112115 no NCBI prot ID no annotation VI_00596 Bacilli_gi_502299557_1641431_1685718 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Enterococcus phage phiEf11.
p57904 no NCBI prot ID no annotation VI_01258 Clostridia_gi_547868097 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p58237 no NCBI prot ID no annotation VI_04914 Bacilli_gi_485054371 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p128412 no NCBI prot ID no annotation VI_04470 Bacilli_gi_300860136_583915_626439 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Enterococcus phage phiEf11.
p142080 no NCBI prot ID no annotation VI_00858 Bacilli_gi_428765681_1849705_1891283 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Enterococcus phage phiEf11.
p128171 no NCBI prot ID no annotation VI_00607 Bacilli_gi_502424906_1033617_1076164 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Enterococcus phage phiEf11.
NC_013696_p1 YP_003358791.1 phage terminase A domain protein NC_013696 Enterococcus phage phiEf11 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p123797 no NCBI prot ID no annotation VI_00609 Bacilli_gi_502427206_1029360_1072336 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Enterococcus phage phiEf11.
p59410 no NCBI prot ID no annotation VI_00699 Bacilli_gi_507029665 Viruses.
p128586 no NCBI prot ID no annotation VI_00593 Bacilli_gi_502290128_1030126_1072642 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Enterococcus phage phiEf11.
p430756 no NCBI prot ID no annotation VI_01265 Clostridia_gi_547942827 Viruses.
p273517 no NCBI prot ID no annotation VI_00614 Bacilli_gi_505484126 Viruses.
p63353 no NCBI prot ID no annotation VI_00406 Bacilli_gi_423364498 Viruses.
KX190833_p51 ANT40011.1 terminase small subunit KX190833 Bacillus phage vB_BtS_BMBtp14 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p53151 no NCBI prot ID no annotation VI_09211 Gammaproteobacteria_gi_452734905 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p183822 no NCBI prot ID no annotation VI_06928 Gammaproteobacteria_gi_452305926 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p369410 no NCBI prot ID no annotation VI_11184 Gammaproteobacteria_gi_514165697 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p239344 no NCBI prot ID no annotation VI_02563 Gammaproteobacteria_gi_490926086 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p140542 no NCBI prot ID no annotation VI_08968 Gammaproteobacteria_gi_485045818_137_41875 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p213713 no NCBI prot ID no annotation VI_00911 Bacilli_gi_484080341 Viruses.
p151884 no NCBI prot ID no annotation VI_00910 Bacilli_gi_484080317 Viruses.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_2 5795 terminase large subunit head and packaging 64 6.60E-102 92.3
phrog_1476 102 no annotation unknown function 12 2.17E-34 24.79
phrog_1202 125 no annotation unknown function 8 7.52E-22 12.25
phrog_10872 9 no annotation unknown function 7 2.99E-30 20.65
phrog_4803 28 no annotation unknown function 5 5.44E-18 8.39
phrog_2395 62 no annotation unknown function 5 8.83E-16 6.18
phrog_4899 27 no annotation unknown function 4 7.60E-15 5.24
phrog_19788 4 no annotation unknown function 4 0 1000
phrog_19998 4 no annotation unknown function 2 1.57E-11 1.93
phrog_32333 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_14025 no annotation unknown function 96.9 5.4E-06 9-53 / 20-61
phrog_151 transposase integration and excision 93.9 0.0063 9-46 / 12-47
phrog_16553 transcriptional repressor transcription regulation 92.1 0.024 2-45 / 5-45
phrog_21336 no annotation unknown function 97.0 3.4E-06 76-118 / 66-108
phrog_25288 no annotation unknown function 96.1 0.00014 10-72 / 8-65
phrog_2538 terminase small subunit head and packaging 95.9 0.00023 10-57 / 9-54
phrog_2606 terminase small subunit head and packaging 99.4 9.8E-17 1-58 / 1-58
phrog_2789 transcriptional regulator transcription regulation 94.1 0.0048 12-53 / 64-103
phrog_309 terminase small subunit head and packaging 91.8 0.029 10-53 / 15-56
phrog_370 terminase small subunit head and packaging 95.8 0.00028 85-152 / 108-166
phrog_3855 HTH DNA binding protein DNA, RNA and nucleotide metabolism 90.6 0.05 5-45 / 65-102
phrog_4151 DNA binding protein DNA, RNA and nucleotide metabolism 97.8 3.2E-08 3-54 / 4-52
phrog_4779 transcriptional regulator transcription regulation 93.0 0.014 22-46 / 14-38
phrog_509 terminase small subunit head and packaging 100.0 6.4E-34 8-226 / 1-188
phrog_5751 terminase large subunit head and packaging 97.4 3.5E-07 7-57 / 6-53
phrog_6299 terminase small subunit head and packaging 95.0 0.0016 6-52 / 12-59
phrog_66 excisionase and transcriptional regulator integration and excision 92.1 0.024 20-45 / 7-32
phrog_7061 HTH DNA binding protein DNA, RNA and nucleotide metabolism 90.2 0.059 22-45 / 44-67
phrog_7344 terminase small subunit head and packaging 94.0 0.0054 8-52 / 14-56
phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 96.1 0.00013 5-53 / 4-55
phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 94.7 0.0023 8-55 / 2-50
phrog_9231 terminase small subunit head and packaging 95.9 0.0002 69-147 / 74-163
phrog_9759 DNA binding protein DNA, RNA and nucleotide metabolism 90.5 0.053 22-42 / 18-38

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 0.00036 10-50 / 4-41
PF09607.9 Brinker DNA-binding domain 0.00048 4-49 / 6-52
PF07141.10 Putative bacteriophage terminase small subunit 0.00051 9-49 / 21-58
PF12759.6 InsA C-terminal domain 0.00058 7-46 / 9-45
PF00292.17 'Paired box' domain 0.00063 5-49 / 19-60
PF08822.10 Protein of unknown function (DUF1804) 0.00097 4-49 / 3-46
PF10668.8 Phage terminase small subunit 0.00098 8-50 / 8-50
PF01710.15 Transposase 0.0012 4-48 / 3-44
PF05344.10 Domain of Unknown Function (DUF746) 0.0013 21-49 / 11-39
PF07750.10 GcrA cell cycle regulator 0.0015 6-49 / 5-46
PF04936.11 Protein of unknown function (DUF658) 0.0017 22-48 / 14-40
PF13011.5 leucine-zipper of insertion element IS481 0.0019 8-50 / 12-52
PF06322.10 Phage NinH protein 0.0026 21-49 / 15-43
PF06627.10 Protein of unknown function (DUF1153) 0.0031 7-49 / 33-73
PF10654.8 Protein of unknown function (DUF2481) 0.0043 22-46 / 80-104
PF13542.5 Helix-turn-helix domain of transposase family ISL3 0.0041 9-46 / 17-50
PF02796.14 Helix-turn-helix domain of resolvase 0.0041 22-45 / 21-44
PF13309.5 HTH domain 0.0049 23-44 / 42-63
PF16677.4 DNA-packaging protein gp3 0.0051 5-46 / 7-53
PF16087.4 Domain of unknown function (DUF4817) 0.0056 8-49 / 4-51
PF01527.19 Transposase 0.0062 7-47 / 8-46
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0068 11-47 / 14-48

Annotations of the NCBI proteins of this PHROG


6:terminase small subunit 1:phage terminase A domain protein 1:terminase 1:small terminase

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K07474 xtmA : phage terminase small subunit no pathways 102 2
K03670 mdoG : periplasmic glucans biosynthesis protein no pathways 63 2

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006355 regulation of transcription, DNA-templated
GO:0019069 viral capsid assembly
GO:0005524 ATP binding
GO:0006313 transposition, DNA-mediated
GO:0000150 recombinase activity
GO:0003677 DNA binding
GO:0006310 DNA recombination
GO:0004803 transposase activity

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