phrog_20133 is made of 4 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
98.5 124 97


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p255215 no NCBI prot ID no annotation VI_12286 Mollicutes_gi_359402641_132443_163838 Viruses.
p38341 no NCBI prot ID no annotation VI_12292 Mollicutes_gi_359403342_460_61809 Viruses.
p442263 no NCBI prot ID no annotation VI_12294 Mollicutes_gi_359403488_358807_364056 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Plectroviridae; Plectrovirus.
p38286 no NCBI prot ID no annotation VI_12292 Mollicutes_gi_359403342_460_61809 Viruses.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_16079 6 no annotation unknown function 3 2.74E-21 11.68
phrog_25415 3 no annotation unknown function 1 7.41E-11 1.25

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_11302 no annotation unknown function 96.0 0.00017 30-66 / 21-58
phrog_11420 DNA binding protein DNA, RNA and nucleotide metabolism 96.5 3.9E-05 1-71 / 5-74
phrog_141 terminase small subunit head and packaging 91.6 0.032 29-51 / 9-31
phrog_20487 no annotation unknown function 95.8 0.00029 30-66 / 21-58
phrog_37992 no annotation unknown function 93.4 0.01 23-52 / 35-64
phrog_4646 transposase integration and excision 99.2 6.3E-15 2-85 / 3-87
phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 91.1 0.041 26-63 / 66-102
phrog_66 excisionase and transcriptional regulator integration and excision 91.5 0.033 28-52 / 8-32

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF00292.17 'Paired box' domain 0.0062 29-51 / 93-125
PF08822.10 Protein of unknown function (DUF1804) 0.0096 29-54 / 80-105
PF04552.12 Sigma-54, DNA binding domain 2.6E-10 5-54 / 30-73
PF01710.15 Transposase 0.006 28-54 / 69-95
PF04936.11 Protein of unknown function (DUF658) 0.00015 28-54 / 87-113
PF09607.9 Brinker DNA-binding domain 1.9E-08 3-55 / 3-51
PF07141.10 Putative bacteriophage terminase small subunit 2.3E-08 11-55 / 21-57
PF13011.5 leucine-zipper of insertion element IS481 2.4E-08 4-56 / 6-51
PF07750.10 GcrA cell cycle regulator 2.9E-08 6-55 / 3-45
PF12759.6 InsA C-terminal domain 3.3E-08 4-53 / 4-45
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 1.4E-07 27-55 / 11-39
PF14493.5 Helix-turn-helix domain 1.4E-07 27-55 / 10-38
PF16087.4 Domain of unknown function (DUF4817) 1.8E-07 8-55 / 2-50
PF05344.10 Domain of Unknown Function (DUF746) 2.8E-07 27-55 / 10-38
PF06627.10 Protein of unknown function (DUF1153) 2.9E-07 5-55 / 29-72
PF13542.5 Helix-turn-helix domain of transposase family ISL3 3.7E-07 5-53 / 11-50
PF10654.8 Protein of unknown function (DUF2481) 4E-07 27-53 / 78-104
PF10668.8 Phage terminase small subunit 4.5E-07 4-55 / 3-48
PF13309.5 HTH domain 7.6E-07 30-51 / 42-63
PF06322.10 Phage NinH protein 8.8E-07 27-55 / 14-42
PF02796.14 Helix-turn-helix domain of resolvase 9.2E-07 27-52 / 19-44
PF13936.5 Helix-turn-helix domain 1E-06 5-52 / 4-43
PF16677.4 DNA-packaging protein gp3 1.2E-06 4-53 / 4-53
PF15978.4 Tn7-like transposition protein D 1.3E-06 28-55 / 202-229
PF04218.12 CENP-B N-terminal DNA-binding domain 1.4E-06 5-54 / 6-48
PF11427.7 Tc3 transposase 1.5E-06 5-54 / 4-45
PF01527.19 Transposase 1.7E-06 5-54 / 4-46
PF12824.6 Mitochondrial ribosomal protein subunit L20 1.8E-06 4-53 / 87-131
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 2.1E-06 28-54 / 18-44
PF03333.12 Adhesin biosynthesis transcription regulatory protein 2.1E-06 27-54 / 53-80
PF02954.18 Bacterial regulatory protein, Fis family 5.2E-06 28-52 / 15-39
PF08765.10 Mor transcription activator family 5.2E-06 29-54 / 72-97
PF13412.5 Winged helix-turn-helix DNA-binding 5.9E-06 28-55 / 16-43
PF05225.15 helix-turn-helix, Psq domain 6.2E-06 27-54 / 14-42
PF13565.5 Homeodomain-like domain 7.3E-06 80-124 / 36-83
PF07638.10 ECF sigma factor 8E-06 6-54 / 134-174
PF17443.1 Uncharacterized protein pXO2-72 9.1E-06 28-52 / 7-31
PF13384.5 Homeodomain-like domain 1.1E-05 27-53 / 15-41
PF13411.5 MerR HTH family regulatory protein 1.3E-05 31-54 / 2-25
PF01381.21 Helix-turn-helix 1.5E-05 27-52 / 7-32
PF01371.18 Trp repressor protein 1.5E-05 27-54 / 46-73
PF08535.9 KorB domain 1.8E-05 29-55 / 3-29
PF13551.5 Winged helix-turn helix 1.9E-05 27-55 / 9-37
PF13404.5 AsnC-type helix-turn-helix domain 1.9E-05 28-53 / 16-41
PF07453.12 NUMOD1 domain 2.2E-05 30-50 / 20-40
PF11112.7 Pyocin activator protein PrtN 2.4E-05 28-54 / 12-39
PF16509.4 TrfB plasmid transcriptional repressor 2.5E-05 27-54 / 29-56
PF06806.11 Putative excisionase (DUF1233) 2.5E-05 29-51 / 9-31
PF00356.20 Bacterial regulatory proteins, lacI family 2.6E-05 31-52 / 1-22
PF13022.5 Helix-turn-helix of insertion element transposase 3.1E-05 29-52 / 25-48
PF00376.22 MerR family regulatory protein 3.2E-05 32-53 / 2-23
PF13556.5 PucR C-terminal helix-turn-helix domain 4.2E-05 28-55 / 11-38
PF07278.10 Protein of unknown function (DUF1441) 4.1E-05 30-54 / 2-26
PF08281.11 Sigma-70, region 4 4.3E-05 27-53 / 24-50
PF02042.14 RWP-RK domain 4.7E-05 27-54 / 10-37
PF11242.7 Protein of unknown function (DUF2774) 5E-05 27-55 / 12-40
PF07825.10 Excisionase-like protein 5.3E-05 30-54 / 3-29
PF05930.11 Prophage CP4-57 regulatory protein (AlpA) 5.6E-05 29-51 / 3-25
PF13413.5 Helix-turn-helix domain 5.8E-05 27-52 / 7-32
PF07506.10 RepB plasmid partitioning protein 5.6E-05 5-53 / 4-45
PF13591.5 MerR HTH family regulatory protein 6E-05 31-53 / 2-24
PF12116.7 Stage III sporulation protein D 6E-05 28-53 / 18-43
PF13518.5 Helix-turn-helix domain 6.6E-05 29-55 / 11-37
PF06413.10 Neugrin 6.1E-05 4-52 / 9-52
PF10743.8 Regulatory phage protein cox 7.9E-05 28-54 / 10-36
PF07037.10 Putative transcription regulator (DUF1323) 8.4E-05 31-52 / 2-23
PF09035.9 Excisionase from transposon Tn916 0.0001 28-52 / 14-38
PF04297.13 Putative helix-turn-helix protein, YlxM / p13 like 0.00011 27-54 / 31-58
PF05331.10 Protein of unknown function (DUF742) 0.00011 28-55 / 52-79
PF02001.15 Protein of unknown function DUF134 0.00012 27-54 / 45-72
PF06970.10 Replication initiator protein A (RepA) N-terminus 0.00013 31-52 / 53-74
PF12964.6 Protein of unknown function (DUF3853) 0.00015 28-54 / 44-70
PF10975.7 Protein of unknown function (DUF2802) 0.00016 9-51 / 31-65
PF12728.6 Helix-turn-helix domain 0.00018 30-53 / 2-26
PF00126.26 Bacterial regulatory helix-turn-helix protein, lysR family 0.00018 29-55 / 11-37
PF04545.15 Sigma-70, region 4 0.0002 28-53 / 23-48
PF07471.11 Phage DNA packaging protein Nu1 0.00021 30-52 / 3-25
PF06530.11 Phage antitermination protein Q 0.00022 27-54 / 77-104
PF07374.10 Protein of unknown function (DUF1492) 0.00023 27-53 / 69-95
PF00325.19 Bacterial regulatory proteins, crp family 0.00024 30-54 / 3-27
PF09862.8 Protein of unknown function (DUF2089) 0.00025 27-54 / 47-74
PF04967.11 HTH DNA binding domain 0.00026 29-54 / 23-48
PF16264.4 SatD family (SatD) 0.00025 28-54 / 170-196
PF02319.19 E2F/DP family winged-helix DNA-binding domain 0.00027 28-55 / 22-49
PF07618.10 Protein of unknown function (DUF1580) 0.00032 34-53 / 7-26
PF12802.6 MarR family 0.00035 30-55 / 22-47
PF00440.22 Bacterial regulatory proteins, tetR family 0.00037 30-53 / 16-39
PF00196.18 Bacterial regulatory proteins, luxR family 0.00041 27-54 / 15-42
PF10078.8 Uncharacterized protein conserved in bacteria (DUF2316) 0.0004 27-52 / 21-46
PF08222.10 CodY helix-turn-helix domain 0.00044 28-55 / 3-30
PF13443.5 Cro/C1-type HTH DNA-binding domain 0.00055 27-52 / 8-34
PF06971.12 Putative DNA-binding protein N-terminus 0.00058 29-50 / 27-48
PF08004.10 Protein of unknown function (DUF1699) 0.00059 7-50 / 90-129
PF08279.11 HTH domain 0.00067 28-55 / 14-41
PF12793.6 Sugar transport-related sRNA regulator N-term 0.00074 27-57 / 16-46
PF01022.19 Bacterial regulatory protein, arsR family 0.00084 28-54 / 15-41
PF01418.16 Helix-turn-helix domain, rpiR family 0.00098 29-54 / 34-59
PF14549.5 DNA-binding transcriptional regulator Cro 0.0011 27-49 / 8-29
PF05339.10 Protein of unknown function (DUF739) 0.0011 27-52 / 14-39
PF05043.12 Mga helix-turn-helix domain 0.0011 28-55 / 29-56
PF16221.4 winged helix-turn-helix 0.0011 29-55 / 46-72
PF07022.12 Bacteriophage CI repressor helix-turn-helix domain 0.0014 29-52 / 11-35
PF13744.5 Helix-turn-helix domain 0.0014 27-52 / 29-54
PF09012.9 FeoC like transcriptional regulator 0.0014 28-56 / 13-41
PF04492.12 Bacteriophage replication protein O 0.0015 29-57 / 49-77
PF15943.4 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 0.0016 30-50 / 9-29
PF12844.6 Helix-turn-helix domain 0.0016 28-52 / 11-35
PF10007.8 Uncharacterized protein conserved in archaea (DUF2250) 0.0016 30-57 / 23-50
PF07900.10 Protein of unknown function (DUF1670) 0.0017 28-57 / 94-123
PF09182.9 Bacterial purine repressor, N-terminal 0.0017 28-55 / 19-46
PF01047.21 MarR family 0.0019 28-55 / 16-43
PF09339.9 IclR helix-turn-helix domain 0.0025 30-55 / 19-44
PF01978.18 Sugar-specific transcriptional regulator TrmB 0.0029 28-55 / 21-48
PF04814.12 Hepatocyte nuclear factor 1 (HNF-1), N terminus 0.0029 27-52 / 124-149
PF13463.5 Winged helix DNA-binding domain 0.0032 28-55 / 16-43
PF12298.7 Eukaryotic mitochondrial regulator protein 0.0029 4-52 / 15-56
PF05584.10 Sulfolobus plasmid regulatory protein 0.0034 28-56 / 17-45
PF14590.5 Domain of unknown function (DUF4447) 0.0037 28-52 / 19-43
PF09048.9 Cro 0.0039 28-54 / 12-38
PF08221.10 RNA polymerase III subunit RPC82 helix-turn-helix domain 0.0039 28-55 / 26-53
PF05269.10 Bacteriophage CII protein 0.0039 28-52 / 22-46
PF07106.12 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) 0.0041 29-57 / 16-46
PF00392.20 Bacterial regulatory proteins, gntR family 0.0043 29-55 / 23-50
PF13693.5 Winged helix-turn-helix DNA-binding 0.0046 28-52 / 14-38
PF08280.10 M protein trans-acting positive regulator (MGA) HTH domain 0.0046 29-54 / 20-45
PF13560.5 Helix-turn-helix domain 0.0054 27-52 / 12-37
PF04645.11 Protein of unknown function, DUF603 0.0057 28-53 / 18-47
PF13171.5 Protein of unknown function (DUF4004) 0.0055 30-54 / 3-27
PF13601.5 Winged helix DNA-binding domain 0.0069 28-56 / 13-41
PF07381.10 Winged helix DNA-binding domain (DUF1495) 0.0067 27-52 / 22-47
PF09904.8 Winged helix-turn helix 0.0072 28-55 / 20-47
PF06892.10 Phage regulatory protein CII (CP76) 0.0073 31-53 / 21-43
PF01726.15 LexA DNA binding domain 0.0083 29-55 / 25-52
PF15977.4 Winged helix-turn-helix DNA binding 0.0087 29-55 / 23-49
PF04703.11 FaeA-like protein 0.009 28-55 / 13-40
PF15731.4 Antitoxin component of bacterial toxin-antitoxin system, MqsA 0.0096 28-52 / 81-105

Annotations of the NCBI proteins of this PHROG


no RefSeq proteins in this PHROG (only proteins from VirSorter contigs)

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006352 DNA-templated transcription, initiation
GO:0051775 response to redox state
GO:0006355 regulation of transcription, DNA-templated
GO:0005737 cytoplasm
GO:0004252 serine-type endopeptidase activity
GO:0019069 viral capsid assembly
GO:0060567 negative regulation of DNA-templated transcription, termination
GO:0005524 ATP binding
GO:0005634 nucleus
GO:0043565 sequence-specific DNA binding
GO:0004803 transposase activity
GO:0006508 proteolysis
GO:0009289 pilus
GO:0045893 positive regulation of transcription, DNA-templated
GO:0005622 intracellular
GO:0006260 DNA replication
GO:0007131 reciprocal meiotic recombination
GO:0016987 sigma factor activity
GO:0005667 transcription factor complex
GO:0045892 negative regulation of transcription, DNA-templated
GO:0003700 DNA binding transcription factor activity
GO:0000150 recombinase activity
GO:0006313 transposition, DNA-mediated
GO:0003677 DNA binding
GO:0006310 DNA recombination

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