Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
366 | 431 | 369 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
p138336 | no NCBI prot ID | no annotation | VI_09249 | Gammaproteobacteria_gi_452736964_0_41957 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
p65090 | no NCBI prot ID | no annotation | VI_11335 | Gammaproteobacteria_gi_544750553 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vieuvirus; Acinetobacter virus B1251; Acinetobacter phage YMC/09/02/B1251. |
p230232 | no NCBI prot ID | no annotation | VI_09318 | Gammaproteobacteria_gi_483431109 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
p302322 | no NCBI prot ID | no annotation | VI_09319 | Gammaproteobacteria_gi_483432914 | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
no colocalized PHROGS |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 94.1 | 0.0047 | 47-84 / 12-49 |
phrog_18003 | no annotation | unknown function | 100.0 | 4.9E-34 | 194-360 / 80-240 |
phrog_18020 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 99.9 | 1.7E-28 | 1-92 / 1-93 |
phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 94.4 | 0.0036 | 7-87 / 6-90 |
phrog_2365 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 95.5 | 0.00061 | 5-79 / 25-100 |
phrog_270 | replication initiation protein | DNA, RNA and nucleotide metabolism | 94.6 | 0.0026 | 7-97 / 4-86 |
phrog_277 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 96.4 | 4.8E-05 | 4-80 / 25-102 |
phrog_345 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 93.5 | 0.0086 | 4-83 / 24-109 |
phrog_6643 | replication initiation protein | DNA, RNA and nucleotide metabolism | 99.9 | 6.3E-31 | 196-360 / 155-314 |
phrog_678 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 99.3 | 1.3E-15 | 1-89 / 1-89 |
phrog_7882 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 90.9 | 0.044 | 7-88 / 21-98 |
phrog_8102 | replication initiation protein | DNA, RNA and nucleotide metabolism | 91.6 | 0.031 | 17-94 / 15-94 |
phrog_8453 | no annotation | unknown function | 91.2 | 0.039 | 42-84 / 44-96 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF04492.12 | Bacteriophage replication protein O | 3.5E-06 | 47-118 / 23-93 |
PF06970.10 | Replication initiator protein A (RepA) N-terminus | 0.0002 | 34-97 / 2-75 |
PF02319.19 | E2F/DP family winged-helix DNA-binding domain | 0.0003 | 74-107 / 24-57 |
PF16221.4 | winged helix-turn-helix | 0.00035 | 74-105 / 47-78 |
PF10007.8 | Uncharacterized protein conserved in archaea (DUF2250) | 0.0004 | 50-107 / 7-56 |
PF05584.10 | Sulfolobus plasmid regulatory protein | 0.00043 | 74-107 / 19-52 |
PF04079.15 | Segregation and condensation complex subunit ScpB | 0.00056 | 47-120 / 79-144 |
PF11313.7 | Protein of unknown function (DUF3116) | 0.0006 | 82-119 / 36-73 |
PF08221.10 | RNA polymerase III subunit RPC82 helix-turn-helix domain | 0.0006 | 50-106 / 12-60 |
PF07381.10 | Winged helix DNA-binding domain (DUF1495) | 0.00061 | 74-107 / 25-68 |
PF03965.15 | Penicillinase repressor | 0.00071 | 74-118 / 19-67 |
PF01475.18 | Ferric uptake regulator family | 0.00076 | 49-119 / 5-73 |
PF08784.10 | Replication protein A C terminal | 0.00091 | 74-107 / 59-95 |
PF04358.12 | DsrC like protein | 0.00096 | 47-106 / 35-94 |
PF09012.9 | FeoC like transcriptional regulator | 0.00097 | 74-109 / 15-50 |
PF01726.15 | LexA DNA binding domain | 0.001 | 74-108 / 26-61 |
PF02295.16 | Adenosine deaminase z-alpha domain | 0.0011 | 74-107 / 19-53 |
PF03551.13 | Transcriptional regulator PadR-like family | 0.0011 | 74-108 / 15-51 |
PF09114.9 | Transcription factor MotA, activation domain | 0.0013 | 48-107 / 13-65 |
PF14947.5 | Winged helix-turn-helix | 0.0014 | 74-119 / 17-62 |
PF01978.18 | Sugar-specific transcriptional regulator TrmB | 0.0014 | 74-108 / 23-57 |
PF14277.5 | Domain of unknown function (DUF4364) | 0.0016 | 74-119 / 16-64 |
PF01047.21 | MarR family | 0.0016 | 74-108 / 18-52 |
PF05732.10 | Firmicute plasmid replication protein (RepL) | 0.0016 | 48-107 / 51-109 |
PF08222.10 | CodY helix-turn-helix domain | 0.0018 | 74-107 / 5-38 |
PF14557.5 | Putative AphA-like transcriptional regulator | 0.002 | 74-119 / 26-81 |
PF01090.18 | Ribosomal protein S19e | 0.002 | 74-108 / 66-115 |
PF10771.8 | Winged helix-turn-helix domain (DUF2582) | 0.0022 | 49-109 / 6-58 |
PF05158.11 | RNA polymerase Rpc34 subunit | 0.0023 | 48-108 / 89-143 |
PF04182.11 | B-block binding subunit of TFIIIC | 0.0024 | 74-108 / 19-53 |
PF13463.5 | Winged helix DNA-binding domain | 0.0025 | 74-107 / 18-51 |
PF07106.12 | Tat binding protein 1(TBP-1)-interacting protein (TBPIP) | 0.0027 | 74-118 / 17-62 |
PF12802.6 | MarR family | 0.0028 | 74-108 / 22-56 |
PF06163.10 | Bacterial protein of unknown function (DUF977) | 0.003 | 74-108 / 27-61 |
PF07848.11 | PaaX-like protein | 0.0032 | 74-118 / 21-67 |
PF09202.10 | Rio2, N-terminal | 0.0032 | 74-107 / 25-58 |
PF09639.9 | YjcQ protein | 0.0033 | 74-108 / 17-53 |
PF09904.8 | Winged helix-turn helix | 0.0035 | 74-106 / 22-54 |
PF02334.15 | Replication terminator protein | 0.0037 | 74-119 / 32-92 |
PF14394.5 | Domain of unknown function (DUF4423) | 0.004 | 74-107 / 37-72 |
PF13601.5 | Winged helix DNA-binding domain | 0.0041 | 74-108 / 15-49 |
PF12793.6 | Sugar transport-related sRNA regulator N-term | 0.0045 | 74-107 / 19-52 |
PF02002.16 | TFIIE alpha subunit | 0.0046 | 74-108 / 27-61 |
PF03428.12 | Replication protein C N-terminal domain | 0.0047 | 47-108 / 39-106 |
PF09824.8 | ArsR transcriptional regulator | 0.005 | 51-106 / 17-61 |
PF13412.5 | Winged helix-turn-helix DNA-binding | 0.0058 | 74-103 / 18-47 |
PF12840.6 | Helix-turn-helix domain | 0.0059 | 74-107 / 24-54 |
PF01022.19 | Bacterial regulatory protein, arsR family | 0.0067 | 74-103 / 17-46 |
PF13034.5 | Protein of unknown function (DUF3895) | 0.007 | 84-108 / 40-68 |
PF09339.9 | IclR helix-turn-helix domain | 0.0072 | 74-106 / 19-51 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
no KEGG group similar to this PHROG |
ID | Definition |
---|---|
GO:0006355 | regulation of transcription, DNA-templated |
GO:0051304 | chromosome separation |
GO:0006412 | translation |
GO:0003723 | RNA binding |
GO:0003735 | structural constituent of ribosome |
GO:0004252 | serine-type endopeptidase activity |
GO:0005524 | ATP binding |
GO:0006276 | plasmid maintenance |
GO:0006508 | proteolysis |
GO:0005666 | DNA-directed RNA polymerase III complex |
GO:0007131 | reciprocal meiotic recombination |
GO:0006383 | transcription by RNA polymerase III |
GO:0006260 | DNA replication |
GO:0004674 | protein serine/threonine kinase activity |
GO:0005667 | transcription factor complex |
GO:0045892 | negative regulation of transcription, DNA-templated |
GO:0005840 | ribosome |
GO:0006274 | DNA replication termination |
GO:0003700 | DNA binding transcription factor activity |
GO:0006468 | protein phosphorylation |
GO:0003726 | double-stranded RNA adenosine deaminase activity |
GO:0003677 | DNA binding |