PHROGS

Average length of proteins	Number of columns in the MSA	Number of conserved columns in the MSA
393.16	651	389

List of all proteins of this PHROG

PHROG prot ID	NCBI prot ID	NCBI prot annotation	Virus ID (click to view)	Virus name	Virus taxonomy
NC_023719_p514	YP_009015825.1	gp522	NC_023719	Bacillus virus G	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p411744	no NCBI prot ID	no annotation	VI_04604	Bacilli_gi_485684761	Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
NC_008206_p8	YP_655873.1	gp8	NC_008206	Mycobacterium phage Wildcat	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Wildcatvirus.
KP027195_p8	AJD82080.1	PolyA polymerase	KP027195	Mycobacterium phage Cosmo	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Wildcatvirus; unclassified Wildcatvirus.
KY385381_p4	AQT25679.1	PolyA polymerase	KY385381	Mycobacterium phage EniyanLRS	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Wildcatvirus; unclassified Wildcatvirus.
MF668280_p32	ASZ74607.1	tRNA nucleotidyltransferase	MF668280	Mycobacterium phage Phabba	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_011273_p28	YP_002224946.1	gp28	NC_011273	Mycobacterium phage Myrna	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_028773_p204	YP_009196588.1	putative tRNA nucleotidyltransferase	NC_028773	Cronobacter phage S13	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; unclassified Tevenvirinae.
NC_019538_p195	YP_007010221.1	putative tRNA nucleotidyltransferase	NC_019538	Aeromonas phage CC2	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; unclassified Tevenvirinae.
MF498773_p314	ATI17539.1	putative tRNA nucleotidyltransferase	MF498773	Aeromonas phage AS-szw	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; unclassified Tevenvirinae.
MF448340_p94	ASU00458.1	putative tRNA nucleotidyltransferase	MF448340	Aeromonas phage AS-zj	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; unclassified Tevenvirinae.
NC_015251_p391	YP_004301229.1	putative tRNA nucleotidyltransferase	NC_015251	Aeromonas virus 65	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae.
KY290955_p366	APU01757.1	tRNA nucleotidyltransferase	KY290955	Aeromonas phage 65.2	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; unclassified Tevenvirinae.
NC_028672_p37	YP_009188904.1	putative tRNA nucleotidyltransferase	NC_028672	Cronobacter phage PBES 02	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; Certrevirus.
NC_011811_p79	YP_002456102.1	tRNA nucleotidyltransferase/poly(A) polymerase	NC_011811	Erwinia phage phiEa21-4	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Kolesnikvirus.
NC_027351_p168	YP_009148964.1	tRNA nucleotidyltransferase	NC_027351	Salmonella phage SSE121	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; Seunavirus.
KY652726_p140	ARB12644.1	tRNA nucleotidyltransferase	KY652726	Klebsiella phage vB_KpnM_BIS47	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; unclassified Vequintavirinae.
NC_025470_p94	YP_009104095.1	multifunctional tRNA nucleotidyl transferase	NC_025470	Shewanella sp. phage 1/40	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_022968_p154	YP_008857370.1	tRNA nucleotidyltransferase	NC_022968	Escherichia phage 4MG	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; Seunavirus.
MF979563_p192	ATS93908.1	putative tRNA nucleotidyltransferase	MF979563	Pectobacterium phage DU_PP_IV	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; Certrevirus; unclassified Certrevirus.
KR052480_p269	AKF12814.1	CCA-adding protein	KR052480	Sinorhizobium phage phiM7	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Emdodecavirus; Sinorhizobium virus M7.
NC_019400_p124	YP_006986957.1	tRNA nucleotidyltransferase	NC_019400	Cronobacter phage vB_CsaM_GAP31	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; Seunavirus.
NC_027204_p268	YP_009143188.1	putative tRNA nucleotidyltransferase-like protein	NC_027204	Sinorhizobium phage phiM12	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Emdodecavirus.
NC_015292_p81	YP_004327056.1	putative tRNA nucleotidyltransferase/poly(A) polymerase	NC_015292	Erwinia phage phiEa104	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Kolesnikvirus.
NC_025830_p68	YP_009111142.1	tRNA nucleotidyltransferase	NC_025830	Escherichia phage Av-05	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; Avunavirus; Escherichia virus Av05.
NC_020201_p136	YP_007392598.1	tRNA nucleotidyl transferase	NC_020201	Pectobacterium phage phiTE	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; Certrevirus.
NC_025436_p95	YP_009100402.1	multifunctional tRNA nucleotidyl transferase	NC_025436	Shewanella sp. phage 1/4	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_017974_p201	YP_006383216.1	putative tRNA nucleotidyltransferase	NC_017974	Cronobacter phage CR3	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; Certrevirus.
NC_028659_p152	YP_009187765.1	tRNA nucleotidyltransferase	NC_028659	Klebsiella phage vB_KpnM_KB57	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; unclassified Vequintavirinae.
NC_023717_p217	YP_009015179.1	putative tRNA nucleotidyltransferase	NC_023717	Cronobacter phage CR9	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; Certrevirus.
MF979560_p191	ATS93591.1	putative tRNA nucleotidyltransferase	MF979560	Pectobacterium phage DU_PP_I	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; Certrevirus; unclassified Certrevirus.
NC_024354_p204	YP_009042441.1	putative tRNA nucleotidyltransferase	NC_024354	Cronobacter phage CR8	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; Certrevirus.
HQ728263_p49	AEJ81308.1	tRNA nucleotidyltransferase	HQ728263	Erwinia phage vB_Eam-MM7	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Kolesnikvirus; Erwinia virus M7.
KY514263_p179	ARB11632.1	hypothetical protein	KY514263	Pectobacterium phage vB_PatM_CB7	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; Certrevirus; unclassified Certrevirus.
NC_016071_p159	YP_004893966.1	tRNA nucleotidyl transferase	NC_016071	Salmonella phage PVP-SE1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; Seunavirus; Salmonella virus PVPSE1.
NC_020843_p142	YP_007673628.1	tRNA nucleotidyltransferase	NC_020843	Vibrio phage 11895-B1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p279320	no NCBI prot ID	no annotation	VI_12198	Halobacteria_gi_543936266	Viruses.
NC_021328_p209	YP_008059417.1	tRNA adenylyltransferase	NC_021328	Halovirus HGTV-1	Viruses; unclassified viruses; unclassified DNA viruses; unclassified archaeal dsDNA viruses; Haloviruses.
NC_021067_p4	YP_007877166.1	hypothetical protein	NC_021067	Vibrio phage helene 12B3	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p6013	no NCBI prot ID	no annotation	VI_02542	Gammaproteobacteria_gi_444434353	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_029067_p34	YP_009222883.1	tRNA nucleotidyltransferase	NC_029067	Vibrio phage eugene 12A10	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_028945_p274	YP_009212514.1	tRNA nucleotidyltransferase	NC_028945	Sinorhizobium phage phiN3	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Emdodecavirus.
MG250486_p83	AUE23309.1	tRNA nucleotidyltransferase	MG250486	Raoultella phage Ro1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; unclassified Vequintavirinae.
NC_029316_p83	YP_009230336.1	poly-A polymerase	NC_029316	Acidianus tailed spindle virus	Viruses; Bicaudaviridae; unclassified Bicaudaviridae.
MF403008_p18	AUZ94830.1	tRNA nucleotidyltransferase	MF403008	Agrobacterium phage Atu_ph07	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Polybotosvirus; Agrobacterium virus Atuph07.
KT870145_p136	AMO44194.1	poly(A) polymerase	KT870145	Roseobacter phage DSS3P8	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_019406_p289	YP_006988523.1	putative tRNA nucleotidyl transferase	NC_019406	Caulobacter phage CcrColossus	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dolichocephalovirinae; Colossusvirus; Caulobacter virus CcrColossus.
NC_027364_p33	YP_009150347.1	hypothetical protein	NC_027364	Escherichia phage PBECO 4	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Asteriusvirus; Escherichia virus PBECO4.
NC_025447_p532	YP_009102126.1	phosphatase	NC_025447	Escherichia phage 121Q	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Asteriusvirus; Escherichia virus 121Q.
KU574722_p192	AMM43757.1	multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	KU574722	Pectobacterium phage CBB	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Mimasvirus; Pectinobacterium virus CBB.
NC_019526_p31	YP_007007186.1	hypothetical protein	NC_019526	Enterobacteria phage vB_KleM-RaK2	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Alcyoneusvirus; Klebsiella virus RaK2.
KY630187_p188	AQW88713.1	multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	KY630187	Serratia phage BF	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Eneladusvirus; Serratia virus BF.
NC_019401_p189	YP_006987291.1	multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	NC_019401	Cronobacter phage vB_CsaM_GAP32	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Mimasvirus; Cronobacter virus GAP32.
NC_027399_p2	YP_009153142.1	hypothetical protein	NC_027399	Klebsiella phage K64-1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Alcyoneusvirus; Klebsiella virus K64-1.
JN849462_p363	AFN37596.1	tRNA nucleotidyltransferase	JN849462	Vibriophage phi-pp2	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Schizotequatrovirus; Vibrio virus KVP40.
KT919972_p102	ALP47001.1	tRNA nucleotidyltransferase	KT919972	Vibrio phage phi-Grn1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Schizotequatrovirus; unclassified Schizotequatrovirus.
KT919973_p230	ALP47382.1	tRNA nucleotidyltransferase	KT919973	Vibrio phage phi-ST2	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Schizotequatrovirus; unclassified Schizotequatrovirus.
NC_028829_p280	YP_009201383.1	tRNA nucleotidyltransferase	NC_028829	Vibrio phage ValKK3	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Schizotequatrovirus.
AP018399_p446	BBA65594.1	CCA tRNA nucleotidyl transferase	AP018399	Xanthomonas phage XacN1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_023688_p288	YP_009011717.1	hypothetical protein	NC_023688	Aeromonas phage PX29	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; unclassified Tevenvirinae.
NC_005260_p308	NP_944186.1	hypothetical protein	NC_005260	Aeromonas virus Aeh1 (Aeh1)	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae.
MG250483_p288	AUE22829.1	multifunctional CCA protein	MG250483	Aeromonas phage Ah1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; unclassified Tevenvirinae.
NC_014636_p88	YP_003969377.1	hypothetical protein	NC_014636	Aeromonas phage phiAS5	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; unclassified Tevenvirinae.
KU160494_p172	ALY07167.1	multifunctional CCA protein	KU160494	Vibrio phage vB_VmeM-32	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; unclassified Tevenvirinae.
p416860	no NCBI prot ID	no annotation	VI_04605	Bacilli_gi_485750259	Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
NC_023719_p191	YP_009015502.1	gp199	NC_023719	Bacillus virus G	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
MF988720_p123	ATN93495.1	tRNA nucleotidyltransferase	MF988720	Pseudoalteromonas phage J2-1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Qingdaovirus; Pseudoalteromonas virus J2-1.

PHROGs colocalized to this PHROG

PHROG	#Prot	Annotation	Category	#Neighbors	Probability	Score
phrog_1185	127	nudix hydrolase	other	6	5.87E-17	7.35
phrog_16686	5	no annotation	unknown function	5	0	1000
phrog_17692	5	no annotation	unknown function	5	0	1000
phrog_19588	4	no annotation	unknown function	4	0	1000
phrog_19442	4	no annotation	unknown function	4	0	1000
phrog_849	170	DNA primase	DNA, RNA and nucleotide metabolism	4	4.43E-11	1.48
phrog_21961	4	no annotation	unknown function	4	0	1000
phrog_11281	9	no annotation	unknown function	4	5.09E-18	8.42
phrog_22853	3	no annotation	unknown function	3	0	1000
phrog_7020	17	no annotation	unknown function	3	7.39E-13	3.25
phrog_4116	34	no annotation	unknown function	3	1.44E-11	1.96
phrog_25730	3	no annotation	unknown function	3	0	1000
phrog_27092	3	no annotation	unknown function	3	0	1000
phrog_34272	2	no annotation	unknown function	2	0	1000
phrog_11979	8	membrane protein	moron, auxiliary metabolic gene and host takeover	2	1.33E-10	1.0
phrog_35797	2	no annotation	unknown function	2	0	1000
phrog_36516	2	no annotation	unknown function	2	0	1000

PHROGs similar to this PHROG

PHROG	Annotation	Category	Probability	Evalue	posQ/posS
phrog_12715	nucleotidyltransferase	DNA, RNA and nucleotide metabolism	91.2	0.038	5-74 / 43-121
phrog_1614	nucleotidyltransferase	DNA, RNA and nucleotide metabolism	97.9	2.1E-08	2-110 / 23-142
phrog_24229	tRNA nucleotidyltransferase	DNA, RNA and nucleotide metabolism	100.0	1.7E-39	2-191 / 5-212
phrog_6931	no annotation	unknown function	94.9	0.0016	216-334 / 26-161

PFAMs similar to this PHROG

ID	Definition	Evalue	posQ/posS
PF01743.19	Poly A polymerase head domain	1.9E-17	28-147 / 1-125
PF13735.5	tRNA nucleotidyltransferase domain 2 putative	3.9E-10	269-419 / 6-156
PF12627.6	Probable RNA and SrmB- binding site of polymerase A	7.7E-08	174-232 / 2-60

Annotations of the NCBI proteins of this PHROG

30:tRNA nucleotidyltransferase 11:hypothetical protein 3:multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 3:tRNA nucleotidyl transferase 2:tRNA nucleotidyltransferase/poly(A) polymerase 2:multifunctional CCA protein 2:PolyA polymerase 2:multifunctional tRNA nucleotidyl transferase 1:CCA tRNA nucleotidyl transferase 1:protein of an unannotated phage 1:tRNA nucleotidyltransferase-like protein 1:CCA-adding protein 1:phosphatase 1:poly(A) polymerase 1:poly-A polymerase 1:tRNA adenylyltransferase

KEGG orthologous groups similar to this PHROG

ID	Name : Definition	Pathways	BestScore	#Hits
K00974	cca : tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]	ko03013 RNA transport	520	59

GO terms in Uniprot proteins similar to this PHROG

ID	Definition
GO:0006396	RNA processing
GO:0016779	nucleotidyltransferase activity
GO:0003723	RNA binding

Loading in process

>NC_023719_p514
---------MKSQAKKIIDILERKGYEAYLIGGAVRNTLH------NFKYGEELPI-KDF
DIV-TNASCEQVMELFED-------TEARG----VQFNVAVVKLDGYEFEVAQYRGESYP
EGGSLRPDKVYPV-------QTLEEDLKRRDFTINAIAMDKM-------------DLIRD
PLE-GCIDIRNRLIRAIGDPN--ERFSEDPLRMIRAFRFMSQLD---YYLDKKTKFGIKN
N-----LGLLKNIPHERMKAEIDKMLRG-QAVG--VALLN-MKMVGVHKHTFLNSIT-SQ
QVPV-LDGVLTLS-------YELLNDVIHKLEEYDRDQLDITELYYLLYYYTSYD-EAEK
SLKESMFLNE----K-----------------EIER------------VLLLL-------
--K--YNK--ILLSKDNLDIFNLVKEIGE-------QRGLSYLKDIIDSYHKLHRINL--
------------DYLL--------EKSLFKSQLPYNGND----IVM----YGEKLNIKPG
KWVGQ-------VLDKMQLYA------------------ISEVEYEIETIIE---EMVGD
GK-------------------------------------------------
>p411744 VI_04604
-MRLKELPSEFQEALPVLEKIKAAGFEAYFVGGSVRDALL------K------RPI-HDV
DIA-TSSYPQETKAIFER-------TVDIG----IEHGTVLVLENGGEYEVTTFRTEDVY
-VDYRRPKSVSFV-------RSLEEDLKRRDFTVNAFALAED-------------AQVID
LFD-GLADLENQVLRAVGKAE--ERFSEDALRIMRGLRFSASLD---FAIEDQTFAAMKT
Y-----APLLEKISVERSFIEFDKLLTA-PHWQ--QGLAA-LIDAGVYDYLPDLR-----
---------------------NKSQQLASMLEDYADDFVF-----------ATSE-QAWS
ALCLALKIRD----C-----------------KLFLKKWKTSSHIQKMVTDLV-SI----
--Y--RHR--LQTSHNKQTIYR----------------YGKELAELAENLRQGQGLAV--
------------DFDL--------ISQLDASLLIHDKKE----IVVNGCLLMKDLGLKPG
PTLGQ-------LLNQIEAAI------------------VEGDLANQQEAIL---DFVRD
RSK------------------------------------------------
>NC_008206_p8
---------MNHYFELCELAKLFAPHKIYLVGGTVRDMLL------G------RES-QDI
DIA-TDAPPEVSSDILRKWGE---EFWDPG----VRFGTVCAKKGDMEVQVTTFRAAEDY
TQGDRHPK-VQWG-------SHIENDLLRRDFTINAIAQHID-----PDG----HVTWTG
RAQ-AFSDINRRILRTPINPI--KSFTDDPLRLIRAARFQAQLPD--FSVATETWEGMES
C-----APHIRNVASERIVAELEKMLLA-PQPF--KGAIL-LESTGIAQILLPESAA-TP
---------------------------------------------ILNTVDADLD-IRWA
VWLFTTPWRQ----A-----------------EKALKRLKVDKRTFTRVPRLL-RLLEIF
--H--AHE--IQDTWSPSKVRRFKVEAKD-------D--LLAVEHLAYHTTGARRYWL--
------------------------AESVGGASAAWHRYV----PQSSGEDVIAALGIAEG
REVGV-------CLKQIQERI------------------FREGRFFGKGEEL---EWLKE
WRAL-----------------------------------------------
>KP027195_p8
---------MNHYFELCELAKLFAPHKIYLVGGTVRDMLL------G------RES-QDI
DIA-TDAPPEVSSDILRKWGE---EFWDPG----VRFGTVCAKKGDMEVQVTTFRAAEDY
TQGDRHPK-VQWG-------SHIENDLLRRDFTINAIAQHID-----PDG----RMTWTG
RAQ-AFSDINRRILRTPINPI--KSFTDDPLRLIRAARFQAQLPD--FSVATETWEGMES
C-----APHIRNVASERIVAELEKMLLA-PQPF--KGAIL-LESTGIAQILLPESAA-TP
---------------------------------------------ILNTVDADLD-IRWA
VWLFTTPWRQ----A-----------------EKALKRLKVDKRTFTRVPRLL-RLLEIF
--H--AHE--IQDTWSPSKVRRFKVEAKD-------D--LLAVEHLAHHTTGARRYWL--
------------------------AESVGGASAAWHRYV----PQSSGEDVIAALGIAEG
REVGV-------CLKQIQERI------------------FREGRFFSKGEEL---EWLKE
WRAL-----------------------------------------------
>KY385381_p4
---------MNHYFELCELAKLFAPHKIYLVGGTVRDMLL------G------RES-QDI
DIA-TDAPPEVSSDILRKWGE---EFWDPG----VRFGTVCAKKGDMEVQVTTFRAAEDY
TQGDRHPK-VQWG-------SHIENDLLRRDFTINAIAQHID-----PDG----HVTWTG
RAQ-AFSDINRRILRTPINPI--KSFTDDPLRLIRAARFQAQLPD--FSVATETWEGMES
C-----APHIRNVASERIVAELEKMLLA-PQPF--KGAIL-LESTGIAQILLPESAA-TP
---------------------------------------------ILNTVDADLD-IRWA
VWLFTTPWRQ----A-----------------EKALKRLKVDKRTFTRVPRLL-RLLEIF
--H--AHE--IQDTWSPSKVRRFKVEAKD-------D--LLAVEHLAYHTTGARRYWL--
------------------------AETVGGASAAWHRYV----PQSSGEDVIAALGIAEG
REVGV-------CLKQIQERI------------------FREGRFFSKGEEL---EWLKE
WRAL-----------------------------------------------
>MF668280_p32
--------MNDQLMRELGARFERADRVLFLVGGSVRDMAL------G------KPP-KDF
DFT-TDALPNEILGILRGWAD---ATWDVG----ARFGTIAAQKDGFDVEITTMRHDG--
--PGRKPE-VTFT-------DSLEEDLIRRDFSINAMAMQVD-----SAGLHGEIADIID
PFN-GRTDLFLELLKTPAEPW--KTFTEDPLRMLRAARFAGQLG---FKVGNTEELSIHS
N-----RALIQSVSAERIAAELDKLLMG-EFAS--KGIAV-LAQTGLLTEIFGDLVL--S
---------------------------------------------ADVRNLASIE-ARWA
DLLHAVDPQA----V-----------------IALLKRLKMSTARIQAVSELV-AWNGRW
--G--KVD---WKSAPLSEVRRLVAAAGP-------Q--LARLEGLIDSDVLSRRVES--
------------------------LLDTEG------HPK----PLLTGKEILMALGVQPG
PIVGK-------AQQFLWELR------------------LTEGALCKH-HAA---MLLKD
WADIS----------------------------------------------
>NC_011273_p28
--------MNDQLMRELGERFARADRKLFLVGGSVRDLLL------A------KTP-KDF
DFT-TDALPKEIQGILRDWAD---AVWDVG----ARFGTIAAQKDGFEIEITTMRHDG--
--PGRKPE-VVFT-------DDIIEDLVRRDFTINAMAMQVD-----AEGLHQGVSDVID
PFN-GRTDLFLDLLKTPAEPW--KTFTEDPLRMMRAARFAAQLD---FKVGDTESLSILS
N-----RELIKSVSAERIAAELDKIVAA-QHSF--KGWSA-LLHSRILEIILPEFIG-AP
---------------------------------------------VAWVASTDIN-VRWA
DTLITAGVKPDQ--V-----------------PAIGKRLKWSNERRQSVTNLV-TWVERF
--A--LVQ---D--WSWTEVRRVVAAAGP-------Q--LDGLLALLDDDILKGRVET--
------------------------LLATEG------HPK----PLLTGKEILLALGVKPG
PVVGR-------AQQFLWDVR------------------LREGNISKH-HAA---LLLKD
WAADKVIV-------------------------------------------
>NC_028773_p204
------------------------MSEIYKVGGCVRDAVM------G------IEP-HDI
DYVVVGSTEQEML----D-----LGYDKVG----SGFPVFIHPKTRD--EYALARTEKKT
GKGYLGFE-TYFGPE-----VSLSEDLLRRDFTMNAMAEK--------------DGQIYD
PHN-GRGDIADGVVRHVND----KAFIEDPVRILRAARFAARYDF---IVDPETIVLIHQ
I----PLEEIESVPSERVVRELEKALDDG-KGY--QFLKI-LSEMHDFMIDMFF-GCNFD
SNF-----VHIDQV----------------------Y----R--------ELGMEG-VLC
LLAEFGGDGA-L----------------------FLTKYKASSDTMFLYRLII-MRSQRH
V-------------FSPQEAFELIQKSDFY------------------------------
--------RRPEFLVKLEKYIAATTLNIVLIASQLATVK-----------ASDLSPELQG
SQIRD-----------E---------------------LVKQRKKKFDEIVGL-------
---------------------------------------------------
>NC_019538_p195
-------------------------MEKYLVGGAVRDQIM------G------KPV-KDR
DWVVVGSTKEEME----G-----LGYKCVG----AHFPVYLDD-DGE--EIALARTEVST
GIGYNDFQ-VDFNPD-----VTIEEDLYRRDFTMNAIAYDPI------------NSVYID
PYN-GIQDIGKKRIRMVNP----YAFRDDPLRVFRAIRFAGRYGF---KMEPETEKAVTD
M---IVGGALDMVSKERVFVEFMKCMEDMSHVD--VFMGI-LRELDVVEFFGFD-REFVK
NLS-------KDGK----------------------I----Y--------TDSTIADL-C
YYCEDFDSYL-K----------------------VHEKLHLTSYQRMEAEMYY-FSGSRF
E---------------------VLDYAGAT-H-------DT-------------------
---PKLQYAL------------MHQPICQEHIDLWRSVS-----------AK-DFPELQG
KELGK-----------A---------------------IKQRRKELIDEV----------
---------------------------------------------------
>MF498773_p314
-------------------------MEKYLVGGAVRDQIM------G------KPV-KDR
DWVVVGSTKEEME----G-----LGYKCVG----AHFPVYLDN-DGE--EIALARTEVST
GIGYNDFQ-VDFNPD-----VTIEEDLYRRDFTMNAIAYDPI------------NSVYID
PYH-GIQDIGKKQIRMVNP----YAFRDDPLRVFRAIRFSGRYGF---KMEPETEKAVTD
M---IVGGALDMVSKERVFVEFMKCMEDMSHVD--VFMGI-LRELDVVEFFGFD-RDFVK
NLS-------KDGK----------------------I----Y--------TDSTIADL-C
YYCEDFDSYL-K----------------------VHEKLHLTSYQRMEAEMYY-FSGSLF
E---------------------VLDYAGAT-H-------DT-------------------
---PKLHYAL------------MHQPIRQEHIDLWRSVS-----------AK-DFPELQG
KELGK-----------A---------------------IKQRRKELIDEV----------
---------------------------------------------------
>MF448340_p94
-------------------------MEKYLVGGAVRDQIM------G------KPV-KDR
DWVVVGSTKEEME----G-----LGYKCVG----SHFPVYLDD-DGE--EIALARTEVST
GIGYNDFQ-VDFNPD-----VTIEEDLYRRDFTMNAIAYDPI------------NSVYID
PYH-GIQDIGKKQIRMVNP----YAFRDDPLRVFRAIRFAGRYGF---KMEPETEKAVTD
M---IVGGALDMVSKERVFVEFMKCMEDMSHVD--VFMGI-LRELDVVEFFGFD-REFVK
NLN-------KDGK----------------------I----Y--------TDSTIADL-C
YYCEDFDSYL-K----------------------VHEKLHLTSYQRMEAEMYY-FSGSRF
E---------------------VLDYAGAT-H-------DT-------------------
---PKLHYAL------------MHQPIRQEHIDLWRSVS-----------AK-DFPELQG
KELGK-----------A---------------------IKQRRKELIDEV----------
---------------------------------------------------
>NC_015251_p391
-------------------------MKTYLVGGAVRDKIL------G------REC-KDM
DWVIVGETVENMD----K-----KGYQRVG----EHFPVYLLP-NGD--ELAMARTERST
GDGYNDFV-VDFNPT-----VTIQEDLYRRDFTINAIAYDDE------------TGSYID
PYG-GICDIVSKKIRMVNP----NAFRDDPLRVFRAIRFACRYGF---EIEIDTHNAIVS
M---VKDGKLKNLPRERMFLELTKIHEDG-KMN--EFYGF-IRDNDIMEEFGFS-EF---
----------TLGC----------------------D----Y--------DVSLQYFL-C
TLQATRKDFE-D----------------------LDKIYKIPNEFKVFADVWY-FDGPEP
A---------------------ILTKCRAE-QEP-----NT-------------------
---PMLDIAL------------DLGMVDVEQVKAYRSVT-----------AK-DFPELTG
KELGD-----------M---------------------IRQEREKQVLGLYLQRLTYHKE
AN---------RCGWKSWDQSV-----------------------------
>KY290955_p366
-------------------------MKTYLVGGAVRDKIL------G------REC-KDM
DWVIVGETVENMD----K-----KGYQRVG----EHFPVYLLP-NGD--ELAMARTERST
GDGYNDFV-VDFNPT-----VTIQEDLYRRDFTINAIAYDDE------------TGSYID
PYG-GICDIVSKKIRMVNP----NAFRDDPLRVFRAIRFACRYGF---EIEIDTHNAIVS
M---VKDGKLKNLPRERMFLELTKIHEDG-KMN--EFYGF-IRDNDIMEEFGFS-EF---
----------TLGC----------------------D----Y--------DVSLQYFL-C
TLQATRKDFE-D----------------------LDKIYKIPNEFKVFADVWY-FDGPEP
A---------------------ILTKCRAE-QEP-----NT-------------------
---PMLDIAL------------DLGMVDVEQVKAYRSVT-----------AK-DFPELTG
KELGD-----------M---------------------IRQEREKQVLGLYLQRLTYHKE
AN---------RCGWKSWDQSVREVKYEN----------------------
>NC_028672_p37
-------------------------MKIYLVGGAVRDELM------G------VES-KDR
DYVVVGSTHEEMM----A-----LGFEQVG----AAFPVYLHPETKE--EYALARTERST
GAGYHDFE-VMFSPD-----VTIEEDLARRDLTINAIAKDLE------------TGEYID
PYG-GIRDIQKGVLRNVSA----AAMREDPLRIYRLARFLARFGGK-FVVDHSTMFICES
A-----KATLAALPKERKMAEIRKCFED-QSND--NRPSLMIDMLCNLG-EMPE-VANLR
GALQ-PKAHHPEGD--------AYVHTLLCLDYAQRI----M---------SSPE-VKWA
VLCHDLGKVQ-Y-FEYGN--LHGHEYFGLGLVAQLGERFGVPNKWADLAHRVC-ADHTRL
HRI--MD-------LKPRKVFDLIERIKAHKPQEN-QFALK-FIEACMCDARGRGPEK--
---------MFDIYDQ--------PHVLWACAVELHKNR--------------LEISEKS
KEISTRLAGRRELISSE---------------------IRAMKVKYVARALSRVKAEIKK
LREEEGYDDSNLPTWRLY---------------------------------
>NC_011811_p79
-------------------------MDFFLVGGSIRDAVF------G------KAS-SDH
DFVVVNATEEQLL----D-----LGLKKVG----KAFPVFITDD-GT--EIAMARRENST
GEGYNDFE-VETD-G-----VTLDEDLLRRDFTINACASAVV------NGGANTDELICA
HPM-SRYDLAHRILRVVDA----DRFKEDPLRILRGLRFAARHNL---FIEPETKALFRQ
M---IEANCLAHLPKERIWKEIEKAASA-ENFW--KF----VSLCGKFN-LFPE-ISGMK
GVRQ-PKKYHPEGD--------VLNHTVLALKHYEEV----ELPQYGWNSGDRVT-QSLC
ILCHDMGKRLTL-SERGN--LHGHESDVRD-LLSFVERIGAPKSVRVATQFCA-EQHHRV
HGM--FV-------RRANRLALWLEEHNQFNNQ---AIVNA-LCMTCVSDANARLQ----
----------KVPYLQ--------MNMLAEAVSQTRKLS-----------PEVVEAIKET
DNIQT--------KKQL---------------------IHKSNVEKVGKILTRYLQIQKD
SNA------------------------------------------------
>NC_027351_p168
-------------------------MKVYLVGGAVRDGLL------G------REV-HDR
DYVVVGATHEQMI----E-----KGFIQVG----ASFPVYLHPETKE--EYALARTERKV
GSGHKGFE-TFFSPD-----VTLAEDLSRRDLTINAMAQDLD------------TGEIID
PFG-GQYDIEKKVLRHTTL-----AFLDDPLRILRAYRFKAQLGKE-WDLHPETKSLCYQ
N-----RHELESISGERKWKEMEKALGS-DNFR--SY----AEAMAELG-ELPE-LESLR
GVEQ-PPEHHPEGD--------AFIHTLLCLDIADQY----E---------ANPY-TKFA
VLCHDFGKAVTF-SKYGN--LLGHEEAGLAPVDALCERIRVPNDFRDVARYVT-EHHTRV
HCI--APR-GGNKGAKPRSLMKLFEAAGNVKSIKTAMKVSA-LADACFCDAKGRGPTK--
---------AAEPYPQ--------GYVLMDAFRCMVAVDT------KVISAEGLSKGKTG
IEIGE-----------M---------------------IRVARIDAIRSVTQRQIAW---
---------------------------------------------------
>KY652726_p140
-------------------------MKVYLVGGAVRDGLL------G------RPV-HDR
DYVVVGATHEEMI----E-----KGFTQVG----AAFPVYLHPETKE--EYALARTERKT
GEGHTGFE-TFFSPD-----VTLEEDLSRRDLTINAMAKDME------------TGFIID
PFN-GMHDLSNMTLRHTTS-----AFMDDPLRILRLFRLKAQLGES-WSVDHKTYTLMFN
N-----RHRLAEISPERKWKEMEKALNS-KNFH--NY----AYHMSIMG-ELPE-LDALR
GVEQ-PREHHPEGD--------AFIHTLMCLQQADKT----F---------CSPQ-VKFA
VLCHDFGKAITF-RKYGN--LLGHEEAGLDPVRTLCSRIRVPNEFRDIALYVT-EHHTRV
HCI--LGR-GNNKGIKPRSMMKLFEAAGNVASQKTQDKVFA-LADACFCDARGRGATH--
---------ADKEYPQ--------GKILLDAFEAVVNTDS------KAVSSAMLEKGKSG
KEIGE-----------A---------------------IRVARIDAIRNVLKERP-----
---------------------------------------------------
>NC_025470_p94
------------------------MIKYYLVGGAVRDMFM------G------VLC-NDY
DFVVVGASPTDFS-----------NWKSVG----KDFPVFLEPTHGW--EIALARIERKV
GVGYTGFE-TDWN-G-----VTLEQDLSRRDLTINAMAIEVDFAASVLIGEPVTVGGVID
TFN-GLSDIEAKVLRHTSS-----SFIEDSVRVLRVARFLAKFDKY-WVDSVNHWKCSPE
LYKLLESIDVNDLTPERVWLEMSKAFSE-DNPS--AF----FDNMSDWNNLFPM-WEAMW
KTPQ-KEDHHPEGC--------VGIHTGMVMDYAAKT----W---------SDPE-IVFA
GLCHDFGKPTCW-DKYGN--AHGHEVEGLSYINDFCDKWKVPNSYRELALITC-EYHTKV
HGC--MSR-GTNGWMKPKSIMKLFEATGALKKP---SRFIN-MLKSCEADAKGRGAGA--
---EQLAEFESKPYLQ--------RSYLEDCLSEVLNYNS------KPLSEKMLAEGKTG
VIIGQ-----------T---------------------IRQEKIKLIREVQN---QWKEK
V--------------------------------------------------
>NC_022968_p154
-------------------------MKVYLVGGAVRDGLL------G------REV-HDR
DYVVVGATHEEMI----N-----KGFTQVG----AAFPVYLHPETNE--EYALARTERKT
GNGHTDFE-TFFSPD-----VTLVEDLSRRDLTINAMAKDLE------------TGEIID
PFG-GQYDIEKKILRHTTL-----AFLDDPLRILRVYRFKAQLGKD-WEIHADTKALCFN
N-----RYGLSHISGERKWKEMEKALGS-DNFR--AY----AEAMAELG-ELPE-LDALR
GVAQ-PPEHHPEGD--------AFVHTLLCLDVADLY----E---------ANPY-TKFA
VLCHDFGKAITF-RKYGN--LIGHEEAGLEPVRTLCERIRVPNDFRDVALYVT-EHHTRV
HCI--APR-GGNKGAKPRSLMKLFEAAGNVASAKTAMKVGS-LADACFCDAKGRGPTK--
---------IAEPYPQ--------GYVLMDAFRCMKAVDT------KVISAECLAKGKSG
IEIGE-----------A---------------------IRVARIDAIRSITQREIKW---
---------------------------------------------------
>MF979563_p192
-------------------------MKIYAVGGQVRDEIL------G------VAS-KDR
DYVVVGSTHEEMM----A-----LGFEQVG----ASFPVYLHPETKE--EYALARTERST
GAGYHDFE-VMFSPD-----VTIEEDLARRDLTINAIAKDLE------------TGEYID
PYG-GIRDIQKGVLRNVSA----AAMREDPLRIYRLARFLARFGGK-FVVDHSTMFICES
A-----KATLAALPKERKMAEIRKCFED-QSND--NRPSLMVGMLCNLG-EMPE-VANLR
GALQ-PKAHHPEGD--------AYVHTLLCLDYAQRI----M---------SSPE-VKWA
VLCHDLGKVQ-Y-FEYGN--LHGHEEFGLGLVAQLSDRFGVPNKWADLAHRVC-ADHTRL
HRI--MD-------LKPRKVFDLIERIKAHKPQEN-QFALK-FIEACLCDARGRGPEK--
---------MFDIYDQ--------PHVLWACAVELHKNR--------------LEISEKS
KEISTRLAGRRELISSE---------------------IRAMKVKYVAHALARVKAEIKK
LREEEGYDDSNLPTWRLY---------------------------------
>KR052480_p269
-------------------------MIKYLVGGAVRDLKM------G------MMP-KDE
DYVWVGATPADMI----D-----MGMKQVG----ADFPVFLDAQ-NR--EHALARIERKI
GEGYKGFE-CAFDTS-----ITIEQDLMRRDLTINAMAMFMD-------------GEVID
PFG-GMDDLKNKVLRHVNA----ETFKEDPLRVLRVARFLARWKD--FDVAPETFKLLQE
M---AATGELKTLQADRVWKETEKALSE-EMPS--RFFVF-LQMIGALNDVFPE-VAALG
GVPQ-PYKYHPEGD--------CFIHTMMVLDQMTAT----Y---------HSPV-ARFA
ALCHDLGKATSDPAKLPH--HYGHEQRGEGIIERMAERLPVPNEYKEIAIAVA-KYHTHI
HNF--DK-------LNSKTIVKMFDDLPHRRYE--GDVMWI-LPTVSECDHKGRTSFF--
---------ANRNYPN--------ATKATQVFLKLSEYKT----------S----DHKPV
EEIKE-------MKPEA---------------------IRDFNYRTKTRIVAEMRGVE--
---------------------------------------------------
>NC_019400_p124
-------------------------MKVYLVGGAVRDGLL------G------REV-HDR
DYVVVGATHEEMI----N-----KGFTQVG----AAFPVYLHPETNE--EYALARTERKT
GNGHTDFE-TFFSPD-----VTLVEDLSRRDLTINAMAQDLE------------TGEIID
PFG-GQYDIEKKILRHTTL-----AFLDDPLRILRVYRFKAQLGKE-WEIHADTKALCFN
N-----RYGLSHISGERKWKEMEKALAS-DNFR--AY----AEAMAELG-ELPE-LDALR
GVAQ-PPEHHPEGD--------AFVHTLLCLDVADIY----E---------ANPY-TKFA
VLCHDFGKAITF-RKYGN--LIGHEEAGLEPLRELCERIRVPNDFRDVALYVT-EHHTRV
HCI--APR-GGNKGAKPRSLMKLFEAAGNVTSAKTAMKVAA-LADACFCDAKGRGPTK--
---------MAEPYPQ--------GYVLMDAFRCMKAVDT------KVISAGCLEKGKSG
IEIGE-----------A---------------------IRVARIDAIRKITQREIKW---
---------------------------------------------------
>NC_027204_p268
-------------------------MIKYLVGGAVRDLKM------G------MMP-KDE
DYVWVGATPADMI----D-----MGMKQVG----ADFPVFLDAQ-NR--EHALARIERKI
GEGYKGFE-CAFDTS-----ITIEQDLMRRDLTINAMAMFMD-------------GQVID
PFG-GMDDLKNKVLRHVNA----ETFKEDPLRVLRVARFLARWKD--FDVAPETFKLLQE
M---AATGELKTLQADRVWKETEKALSE-EMPS--RFFVF-LQMIGALNDVFPE-VAALF
GVPQ-PYKYHPEGD--------CFIHTMMVLDQMTAT----Y---------HSPV-ARFA
ALCHDLGKATSDPAKLPH--HYGHEQRGEGIIERMAERLPVPNEYKEIAIAVA-KYHTHI
HNF--DK-------LNSKTIVKMFDDLPHRRYE--GDVMWI-LPTVSECDHKGRTSFF--
---------ANRNYPN--------ATKATQVFLKLSEYKT----------S----DHKPV
EEIKE-------MKPEA---------------------IRDFNYRTKTRIVAEMRGVE--
---------------------------------------------------
>NC_015292_p81
-------------------------MDFFLVGGSIRDAVF------G------KAS-SDH
DFVVVNATEEQLL----D-----LGLKKVG----KAFPVFITDD-GT--EIAMARRENST
GEGYNDFE-VETD-G-----VTLDEDLLRRDFTINACASAVV------NGGANTDELICA
HPM-SRYDLAHRILRVVDA----DRFKEDPLRILRGLRFAARHNL---FIEPETKALFRQ
M---IEANCLAHLPKERIWKEIEKAASA-ENFW--KF----VSLCGKFN-LFPE-ISGMK
GVRQ-PKKYHPEGD--------VLNHTVLALKHYEEV----ELPQYGWNSSDRVT-QSLC
ILCHDMGKRLTL-SERGN--LHGHESDVRD-LLSFIERIGAPKSVRVATQFCA-EQHHRV
HGM--FV-------RRANRLALWLEEHNQFNNQ---AIVNA-LCMTCVSDANARLQ----
----------KVPYLQ--------MNMLAEAVSQTRKLS-----------PEVVEAIKET
DNIQT--------KKQL---------------------IHKSNVEKVGKILTRYLQIQKD
SNA------------------------------------------------
>NC_025830_p68
-------------------------MKVYLVGGAVRDKLL------G------REI-SDR
DYVVVGATHEEML----K-----RGFTQVG----ASFPVYLHPETRE--EYALARTERKT
GEGHKGFE-VCFSPD-----VTLEEDLARRDLTINSMAMDVE------------SGEIID
PFG-GQVDLGLKTLRHTSQ-----AFIEDPLRILRLFRFKAQLGEE-WHIHPETFKLAYD
N-----RHSLAEISAERKWKEMLKALKS-GYFR--SF----AVNMGRIG-ELPE-LEALR
GVQQ-PKEHHPEGD--------AYTHTILALRVADEL----G---------ADPL-TKFA
VLCHDFGKAVTH-KDNGN--LHGHEKAGVDVIQSLCERLKIYNIYRDTAKYVA-ENHTKV
HAI--SPK-DGNNGLKPKSIMKIFEAAGQADQ---KIKVYT-LADACYCDAKGRGGDF--
---------RHKPYPQ--------GHILLEAYDAMTKVDS------KAITKPLLEKGKKG
KEIGE-----------A---------------------VRVARIDAIRKAISRDMLF---
---------------------------------------------------
>NC_020201_p136
----------------------MVEKKIYLVGGSVRDELI------G------LQP-KDR
DYVCVGYTHEDMM----D-----MGFEQVG----STFPVYLEPETKE--EYALARTERST
GDGYHDFE-VMFSPD-----VTIQEDLARRDLTINAIAKDLE------------TGEYID
PYG-GIRDIQKGVLRNVSA----AAMREDPLRIYRLARFLARFGGK-FVVDHSTMFICES
A-----KETLAALPKERKMAEIRKCLED-QSND--NRPSLMVDMLCNLG-EMPE-VANLR
GALQ-PKAHHPEGD--------AYIHTLLCLDYAQRI----M---------SAPD-TKWA
VLCHDLGKVQ-Y-FEYGN--LHGHEEFGLGLVAQLSERLGVPNKWADLAHRVC-ADHTRL
HRI--MD-------LKPRKVFDLIERIKAHKPQEN-QFALK-FIEACMCDARGRGPEK--
---------MFDIYDQ--------PHVLWACAVELHKNR--------------LEISEKS
KEISTRLAGRRELIPSE---------------------IRAMKVKYVARALTRVKAEIKK
LRGEEGYDDSNLPTWRLY---------------------------------
>NC_025436_p95
------------------------MIKYYLVGGAVRDMFM------G------VLC-NDY
DFVVVGASPTDFS-----------NWKSVG----KDFPVFLEPTHGW--EIALARIERKV
GVGYTGFE-TDWN-G-----VTLEQDLSRRDLTINAMAIEVDFAASVLIGGPVTVGGVID
PFN-GLSDIKAKVLRHTSS-----AFIEDSVRVLRVARFLAKFDKY-WVDSVNHWKCSPE
LYKLLESIDVNDLTPERVWLEMSKAFSE-DNPS--AF----FDNMSDWNNLFPM-WEDMW
KTPQ-KEDHHPEGC--------VGIHTGMVMDYAAKT----W---------SDPE-IVFA
GLCHDFGKPTCW-DKYGN--AHGHEVEGLSYINDFCDKWKVPNSYRELALITC-EYHTKV
HGC--MSR-GTNGWMKPKSIMKLFEATGALKKP---SRFIN-MLKSCEADAKGRGAGA--
---EQLAEFESKPYLQ--------RSYLEDCLSEVLNYNS------KPLSEKMLAEGKTG
VIIGQ-----------T---------------------IRQEKIKLIREVQN---QWKEK
V--------------------------------------------------
>NC_017974_p201
-------------------------MKIYLVGGAVRDELM------G------VES-KDR
DYVVVGSTHEEMM----A-----LGFEQVG----AAFPVYLHPETKE--EYVLARTERST
GAGYHDFE-VMFSPD-----VTIEEDLARRDLTINAIAKDLE------------TGEYID
PYG-GIRDIQKGVLRNVSA----AAMREDPLRIYRLARFLARFGGK-FVVDHSTMFICES
A-----KATLAALPKERKMAEIRKCFED-QSND--NRPSLMIDMLCNLG-EMPE-VANLR
GALQ-PKAHHPEGD--------AYVHTLLCLDYAQRI----M---------SSPE-VKWA
VLCHDLGKVQ-Y-FEYGN--LHGHEEFGLGLVAQLSERFGVPNKWADLAHRVC-ADHTRL
HRI--MD-------LKPRKVFDLIERIKAHKPQEN-QFALK-FIEACMCDARGRGPEK--
---------MFDIYDQ--------PHVLWACAVELHKNR--------------LEISEKS
KEISTRLAGRRELISSE---------------------IRAMKVKYVARALSRVKAEIKK
LREEEGYDDSNLPTWRLY---------------------------------
>NC_028659_p152
-------------------------MKVYLVGGAVRDGLL------G------RPV-HDR
DYVVVGATHEEMI----E-----KGFTQVG----AAFPVYLHPETKE--EYALARTERKT
GEGHTGFE-TFFSPD-----VTLEEDLSRRDLTINAMAKDME------------TGFIID
PFN-GMHDLSNMILRHTTS-----AFMDDPLRILRLFRLKSQLGES-WSVDHKTYTLMFN
N-----RHRLAEISPERKWKEMEKALNS-KNFH--NY----AYHMSIMG-ELPE-LDALR
GVEQ-PPEHHPEGD--------AFIHTLMCLQQADKT----F---------CSPQ-VKFA
VLCHDFGKAITF-RKYGN--LLGHEEAGLDPVRTLCSRIRVPNEFRDIALYVT-EHHTRV
HCI--LGR-GNNKGIKPRSMMKLFEAAGNVASQKTQDKVFS-LADACFCDARGRGAAH--
---------ADKEYPQ--------GKILLDAFEAVVNMDS------KAVSSAMLEKGKSG
KEIGE-----------A---------------------IRVARIDAIRNVLKERS-----
---------------------------------------------------
>NC_023717_p217
------------------------------------------------------------
--------------------------MPHG----AAFPVYLHPETKE--EYALARKERST
GDGYHDFE-VMFSPD-----VTIEEDLARRDLTINAIAKDLE------------TGEYID
PYG-GIRDIQKGVLRNVSA----AAMREDPLRIYRLARFLARFGGK-FVVDHSTMFICES
A-----KATLAALPKERKMAEIRKCFED-QSND--NRPSLMIDMLCNLG-EMPE-VANLR
GALQ-PKAHHPEGD--------AYIHTLLCLDYAQRI----M---------SAPE-TKWA
ALCHDLGKVQ-Y-FEYGN--LHGHEEFGVVLVEQLSDRFGVPNKWADLAKRVC-ADHTRL
HRI--MD-------LKPRKVFELIERIKAHKPDEN-HFALK-FMEACMCDARGRGPEK--
---------MFDIYDQ--------PHVLWACAVELHKNR--------------LEISEKS
KEISTRLAGRRELISSE---------------------IKAMKVKYVARALVRVKAELKK
LREEEGYDDSNLPTWRLY---------------------------------
>MF979560_p191
-------------------------MKIYAVGGQVRDEIL------G------VAS-KDR
DYVVVGSTHEEMM----A-----LGFEQVG----ASFPVYLHPETKE--EYALARTERST
GAGYHDFE-VMFSPD-----VTIEEDLARRDLTINAIAKDLE------------TGEYID
PYG-GIRDIQKGVLRNVSA----AAMREDPLRIYRLARFLARFGGK-FVVDHSTMFICES
A-----KATLAALPKERKMAEIRKCFED-QSND--NRPSLMVGMLCNLG-EMPE-VANLR
GALQ-PKAHHPEGD--------AYVHTLLCLDYAQRI----M---------SSPE-VKWA
VLCHDLGKVQ-Y-FEYGN--LHGHEEFGLGLVAQLSDRFGVPNKWADLAHRVC-ADHTRL
HRI--MD-------LKPRKVFDLIERIKAHKPQEN-QFALK-FIEACLCDARGRGPEK--
---------MFDIYDQ--------PHVLWACAVELHKNR--------------LEISEKS
KEISTRLAGRRELISSE---------------------IRAMKVKYVAHALARVKAEIKK
LREEEGYDDSNLPTWRLY---------------------------------
>NC_024354_p204
-------------------------MKIYLVGGAVRDELM------G------VES-KDR
DYVVVGSTHEEMM----A-----LGFEQVG----AAFPVYLHPETKE--EYALARTERST
GAGYHDFE-VMFSPD-----VTIEEDLARRDLTINAIAKDLE------------TGEYID
PYG-GIRDIQKGVLRNVSA----AAMREDPLRIYRLARFLARFGGK-FVVDHSTMFICES
A-----KATLAALPKERKMAEIRKCFED-QSND--NRPSLMIDMLCNLG-EMPE-VANLR
GALQ-PKAHHPEGD--------AYVHTLLCLDYAQRI----M---------SSPE-VKWA
VLCHDLGKVQ-Y-FEYGN--LHGHEEFGLGLVAQLSERFGVPNKWADLAHRVC-ADHTRL
HRI--MD-------LKPRKVFDLIERIKAHKPQEN-QFALK-FIEACMCDARGRGPEK--
---------MFDIYDQ--------PHVLWACAVELHKNR--------------LEISEKS
KEISTRLAGRRELISSE---------------------IRAMKVKYVARALSRVKAEIKK
LREEEGYDDSNLPTWRLY---------------------------------
>HQ728263_p49
-------------------------MDFFLVGGSIRDAAF------G------KQS-SDH
DFVVVNATEEQLL----A-----LGLKKVG----KSFPVFITDD-GT--EIAMARRESST
GEGYNDFE-VDTN-G-----VTLDEDLLRRDFTINACASPVR------AGGANTDELICA
HPM-SRYDLANRILRVVDA----ERFKEDPLRILRGLRFAARHNL---FIEPETKALFRE
M---VEAGCLAHLPKERIWKEIEKAASS-DNFW--KF----VSLCGKFN-LFAE-ISGMR
GVRQ-PKKYHPEGD--------VLNHTVLALQHYEEV----ELPKYGWDNSNRVM-QSLC
ILCHDMGKRITL-KERGN--LHGHESDIRD-LESFLDRIGAPKNVRSAAKFCA-EQHHRV
HGM--FV-------RRANRLAVWLEEHKEFNNP---TIVNA-LCMTCISDANARLQ----
----------KVLYLQ--------MNMLAEIVSQTRKLS-----------PEVVEAIKET
DNIQT--------KKQL---------------------IHKSNTYKVGQILDRYLNILKE
SNA------------------------------------------------
>KY514263_p179
----------------------MVEKKIYLVGGSVRDELI------G------LQP-KDR
DYVCVGYTHEDMM----D-----MGFEQVG----STFPVYLEPETKE--EYALARTERST
GDGYHDFE-VMFSPD-----VTIQEDLARRDLTINAIAKDLE------------TGEYID
PYG-GIRDIQKGVLRNVSA----AAMREDPLRIYRLARFLARFGGK-FVVDHSTMFICES
A-----KETLAALPKERKMAEIRKCLED-QSND--NRPSLMVDMLCNLG-EMPE-VANLR
GALQ-PKAHHPEGD--------AYIHTLLCLDYAQRI----M---------SAPD-TKWA
VLCHDLGKVQ-Y-FEYGN--LHGHEEFGLGLVAQLSERLGVPNKWADLAHRVC-ADHTRL
HRI--MD-------LKPRKVFDLIERIKAHKPQEN-QFALK-FIEACMCDARGRGPEK--
---------MFDIYDQ--------PHVLWACAVELHKNR--------------LEISEKS
KEISTRLAGRRELIPSE---------------------IRAMKVKYVARALTRVKAEIKK
LRGEEGYDDSNLPTWRLY---------------------------------
>NC_016071_p159
-------------------------MKVYLVGGAVRDGLL------G------REV-HDR
DYVVVGATHEQMI----E-----KGFIQVG----ASFPVYLHPETKE--EYALARTERKV
GSGHKGFE-TFFSPD-----VTLAEDLSRRDLTINAMAQDLD------------TGEIID
PFG-GQYDIEKKVLRHTTL-----AFLDDPLRILRAYRFKAQLGKE-WDLHPETKSLCYQ
N-----RHELESISGERKWKEMEKALGS-DNFR--SY----AEAMAELG-ELPE-LESLR
GVEQ-PPEHHPEGD--------AFIHTLLCLDIADQY----E---------ANPY-TKFA
VLCHDFGKAVTF-SKYGN--LLGHEEAGLAPVDALCERIRVPNDFRDVARYVT-EHHTRV
HCI--APR-GGNKGAKPRSLMKLFEAAGNVKSIKTAMKVSA-LADACFCDAKGRGPTK--
---------AAEPYPQ--------GYVLMDAFRCMVAVDT------KVISAEGLSKGKTG
IEIGE-----------M---------------------IRVARIDAIRSVTQRQIAW---
---------------------------------------------------
>NC_020843_p142
------------------------MKKFYLVGGAPRDYLL------G------LQP-KDY
DFVVVGASPDDFK-----------EWQCVG----KDFPVFLEPTRGW--EVALGRIERKV
GAGYTGFE-SDWK-G-----VTLEEDLARRDLTINSIAIEVDWEETVLQGKPVTIGTWID
PFS-GIEDIKNKILRPTTT-----AFKEDPIRLLRAARFMARYGDT-WSISGELLKMMDD
IY---YSGEMRFLVAERVFLEMQKALTE-KYPS--LF----FKTLFRYN-IFKQ-IDWVY
GVPQ-REDHHPEKEDYLEKFMSVLKHTMLALDYAAAQ----W---------NDPE-INMA
VCLHDTGKRVSY-EDYGN--TLEHEIKGVPAVKEFCEQWKVPNTYRDLAVLVC-QHHTRV
HGC--LGR-SSNDWMRPKSIFKLMEETSALKRP---ERFVK-ILKCCEADSKGRGLETSS
NYNETQNYFLSKSYPQ--------RQYLEECLQAVLALDT------KAISKEMLEKGKSG
VIIGQ-----------A---------------------IREARIGEIRKVQN---MWKNK
LKEK-----------------------------------------------
>p279320 VI_12198
-MTTQIGEEIAD-V--VELPAEFDGLNVAVVGGFVRDRLR------N------VET-NDI
DLMVTEVVPAELK----S-----RDFRPIE---GASFPVFQDTL-GR--EVALARTEEST
GDGHTAFE-AHAIPADIPHEEAIGRDLERRDLTINAVAVDAR------------TGEIFD
PHG-GVEDLEAGILRHVS-----VAFAEDPLRVVRAARFRARTGF---EIADETRELMAE
V-----APDLATIPDDRFGDELVKVLKQAVQPR--AFVDV-LDDVGALEIAFPE-IAALA
GVPAGPEGTHEEGD--------SLEHTLRVLEEMHDR----Q--------GNDVP-ALLA
ALGHDLGKGETSADELPA--HHGHDKRGVPVARSMRSRLGLNRDLRGVMDTAA-SVHMRL
PRV--EK-------MTATAILDLAMDIHVSPLT-----LEQ-ALDLGEADAKGRQPAG--
---------DFQNGPI--------REQLTVAIEAVETIGGSEAMEKRGIDPTDVGSEIPG
ERIGN-----------L---------------------VRQDRVEAFRDRAGALVEAPGG
NQ-------------------------------------------------
>NC_021328_p209
-MAPLSLGMEHT-L--PELPSEFDGLPTFVVGGWVRDAFRE-----G------VEP-SDV
DLMVTEVTPEEMR----E-----RGFTEIDNSGNDTFAVFLDSL-GR--EVAIAREEVST
GEGHTDFT-VEPVPANVRALEAVERDLLRRDFTVNSMAVDAR------------RGILHD
PHG-GRQALEDGTLRHVNE----SGFIEDPLRILRGARFAARLGA---EVADETKILMAE
M-----SPRLQDLPGERIRMELEKNFKQAKNPR--IFFDV-LEEVFALEWAFPE-LMALK
HVPAGPPEFHNEGS--------AFEHTMLVLEEMFEL----R--------GNDEL-GLLM
ALAHDLGKVETPEDELPS--HRGHGNRDAPLWR-MSDRLKFSNRQERAMSEAM-HHHMRL
KHI--ED-------MNEKTLFDTFTHVHN---------PDR-LVDLMIADARGRDPQG--
---------DFPAETL--------RDAFERAEQACENVTGQTLIN-----AGKQPDEIGG
EKFGK-----------L---------------------LRDARISEMKRLK---------
---------------------------------------------------
>NC_021067_p4
----------------MGVHGDFKNATIYLVGGFVRDHFM------G------KIP-KDK
DYVVVGSSPEEML----S-----LGFKQVG----KDFPVFLHPETGD--EYALARTDRKT
GTGYEGFT-CEWD-G-----VTLEEDLRRRDLTINAIAWDCS----------RNLGKVYD
PFN-GRGDIKNKMLRPVSD-----AFKEDPLRCLRAARFMAQFLN--FTAAGSLYKYCEE
L----EYEVCNTLTPERVWLETVKAMFT-EQPS--NY----FLWLSMFG-LFPE-YIALT
HCPQ-RVDHHPEYW--------VGTHTDMVMDYAATT----W---------NDPE-IVFA
CLTHDFGKPLCW-GKFEN--AHGHEKEGLPFIEDFCDRYKVPNSYRVLALQTC-EYHTKV
HGL--FGR-NNQAWTRPKSIMKLFEDTGAMKHP---ERFKK-MLKACEADAKGRGKVVHE
DETKTIQYYLNKPYHQ--------REYLEECLNVILSLDT------KIISSKMMEEGKKG
TLIGE-----------A---------------------IRVARISEIRGVQN---IWKQE
LSDTTSCVEACL---------------------------------------
>p6013 VI_02542
-------------------------MQIYKVGGAVRDRLL------G------QPV-TDI
DWVVVGASTEDML----I-----KGYRPVG----TDFPVFLHPLTNE--EYALARTERKS
GVGYGGFV-FHASPE-----VTLEQDLIRRDLTINAMAEDKD-------------GNLTD
PYN-GQKDLEARILRHVS-----PAFAEDPLRVLRVARFAARYAGYGFTIAPETLGLMRQ
L---SESGELKALTAERSWKEISRALME-EQPQ--VFIQV-LHDCGALKELMPE-VEALF
GVPQ-PAAHHPEID--------TGVHVLSVLEQSARH----K---------HPLT-VRWA
CLLHDLGKGLTPEAEWPR--HIAHEHTGLRLIKVVNERFRVPRDCQELALLVG-QYHTHG
HRA--LE-------LKPSTLLELLQSFDVYRRP---QRFEE-FIAACEMDARGRHGFE--
----------QRSYPQ--------AGYLRGAAEAARAVSV----------QPLLEQGLKG
KELGD-------AL-------------------------KNERLKALKTYKAEHIA----
---------------------------------------------------
>NC_029067_p34
----------------MGVHGDFKNATIYLVGGFVRDHFM------G------KIP-KDK
DYVVVGSSPEEML----S-----LGFKQVG----KDFPVFLHPETGD--EYALARTDRKT
GTGYEGFT-CEWD-G-----VTLEEDLRRRDLTINAIAWDCS----------RNLGKVYD
PFN-GRGDIKNKMLRPVSD-----AFKEDPLRCLRAARFMAQFPN--FTAAGSLYKYCEE
L----EYEVCNTLTPERVWLETVKAMFT-EQPS--NY----FLWLSMFG-LFPE-YIALT
HCPQ-RVDHHPEYW--------VGTHTDMVMDYAATT----W---------NDPE-IVFA
CLTHDFGKPLCW-GKFEN--AHGHEKEGLPFIEDFCDRYKVPNSYRVLALQTC-EYHTKV
HGL--FGR-NNQAWTRPKSIMKLFEDTGAMKHP---ERFKK-MLKACEADAKGRGKVVHE
DETKTIQYYLNKPYHQ--------REYLEECLNVILSLDT------KIISSKMMEEGKKG
TLIGE-----------A---------------------IRVARISEIRGVQN---IWKQE
LSDTTSCVEACL---------------------------------------
>NC_028945_p274
-------------------------MIKYLVGGAVRDLKM------G------MMP-KDE
DYVWVGATPADMI----D-----MGMKQVG----ADFPVFLDAQ-NR--EHALARIERKT
GEGYKGFE-CAFDTS-----ITIEQDLMRRDLTINAMAMFMD-------------GQIID
PFG-GMDDLKNKVLRHVNA----ETFKEDPLRVLRVARFLARWKD--FDVAPETFKLLQE
M---AASGELKTLQADRVWKETEKALSE-EMPS--RFFVF-LQMIGALNDVFPE-VAALF
GVPQ-PYKYHPEGD--------CFIHTMMVLDQMTAT----Y---------HSPV-ARFA
ALCHDLGKATSDPAKLPH--HYGHEQRGEGIIERMAERLPVPNEYKEIAIAVA-KYHTHI
HNF--DK-------LNSKTIVKMFDDLPHRRYE--GDVMWI-LPTVSECDHKGRTSFF--
---------ANRHYPN--------ATKATQVFLKLSQYKT----------S----DHKPV
EEIKE-------MKPEA---------------------IRDFNYRTKTRIVAEMRGVE--
---------------------------------------------------
>MG250486_p83
------------------------------------------------------------
------------------------------------------------------------
--------------------MTLEEDLSRRDLTINAMAKDME------------TGFIID
PFN-GMHDLSNMTLRHTTS-----AFMDDPLRILRLFRLKAQLGES-WSVDHKTYTLMFN
N-----RHRLAEISPERKWKEMEKALNS-KNFH--NY----AYHMSIMG-ELPE-LDALR
GVEQ-PREHHPEGD--------AFIHTLMCLQQADKT----F---------CSPQ-VKFA
VLCHDFGKAITF-RKYGN--LLGHEEAGLDPVRTLCSRIRVPNEFRDIALYVT-EHHTRV
HCI--LGR-GNNKGIKPRSMMKLFEAAGNVASQKTQDKVFS-LADACFCDARGRGATH--
---------ADKEYPQ--------GKILLDAFEAVVNTDS------KAVSSAMLEKGKSG
KEIGE-----------A---------------------IRVARIDAIRNVLKERP-----
---------------------------------------------------
>NC_029316_p83
MERIEVEINNPE-I--LEYIKKLGTNNVYLVGGTVRDILT------G------KKP-KDL
DFVVTDFDKALKLAEEMN-----LPIHEDG----IRFGVLRIGD-KY--DFASLRKERYD
TVS--KPT-VELG-------ASLEEDARRRDFTINDLYGKIV-----GIHGNKLVMEILD
FNN-GLEDLRNHTLRFVGNPQ--ERIDEDPLRILRGIRFIL----YGYKMSPDQLEIMKK
N-----ISKLDKLPIERIRDEILKILKV--NPA--EGFKL-LDEFGLLKYLYGEHYEALK
NTYHDNRGAHHGED--------VIEHTYEALKRLRNP----D-----------IE-TILA
VIYHDVGKPYTRSEKNGKIMFIGHAKKSAEIAKELMKRLKLPNNIIKDVTNLI-EMHMDF
NLA--QN-----NEKNQAQLITKLMSLYYWNPEKVREIYNK-LVELSHADTGSENILN--
------------------------------------------------MSNRITEPIITG
EEIANTFGVSGNILKHLKERAYTLQLLGYDKDEIMKMLKGDHKLYEFKKLLEN-------
---------------------------------------------------
>MF403008_p18
--------MLTPELENIAEIFKNEGFEIRLVGGCVRDVLR------G------VTP-KDI
DLC-TDALPSEMIAIADE---HSIKVIPTG----LQHGTVTFVIDDQSYEITTLRIDAET
--DGRHAN-VEFT-------RSFEEDARRRDLTINAMSFDFN-------------GNLYD
YFG-GREDLKNKVVRFVGNFE--DRIREDYLRIFRYFRFASVMGAD-LDDDIKNFIVQDD
V-----IEGMRNISKERIWSEFKKVRFH-DHDLISDLFEF-INRVEDEE-------L-FR
-----------------------------------------FPQDDMFDHLNGPF-FEIA
RFCNDTDR-FAE--I-----------------------FKISA-DEKSMIAFFGTVRHSY
PVHINAFI--TKYPHLNEAVTPFVK-----------------------------RINL--
------------------------PHFEFDGSKTIPHVF----PVSGK--DLIAMGMKPG
VNMGK-------ILDTLKERW------------------ENSYFIISKEELLDGFQFFDN
INELAVITVEDENDF--EVDTVRKVVFDNYKFIVNEKDAVNMIVHGKAVRV
>KT870145_p136
-MRITPEWLKTDAVQFVLGELGASGYKAYAVGGCVRDAVI------G------LPC-KDI
DIA-TSATPEDVERIFSDWKTGDVKLLPTG----VDHGTWTVMVEGEPFEVTTFRKDVAT
--DGRRAT-VAYA-------KTMEEDAQRRDFTMNALYMDWQ-------------GYVFD
PTGQGIADIMARNIRFVGNAN--ERCEEDYLRIMRLFRFHAQFGV--GPMDSDAYWAARD
N-----AEGLLQVSGERIWSELKKILST-HTPV--EALHE-MVGAGVLDVIMPDRGD-V-
--------------------------------------------------LSVAE-VISA
ERDAALGPRWQR--RFAA-----------LLHKGHEIPFPASNEERKEIADIIEHKRFGG
SLARTAYK--TR--SRNTAVDCYVIACGK-------N-----------------RIPC--
------------------------MPYEEQVQLGLNSKC----PVSAD--YLMSKGIKPG
PELGR-------LLKKADDLF------------------LASHFKATRDQIMEKMPL---
---------------------------------------------------
>NC_019406_p289
--MRELTINIPAPVLRLRESFRAAGFDIRSVGGIIRNKLA------G------VDDLSDH
DFA-TDATPDEQIAIYEA---LGIRYILTG----YDYGTITIVLEGINYEITTLRLDVAT
--DGRRAA-VAYT-------RDWIADLLRRDLTYNAIELTFD-------------GDLVD
PYG-GREDLAAGRTRFVGSAL--ARIQEDYLRLLRFVRFHARFSGL-APFDDEVMAALPH
V-----VGGLRMLSKERIWSELKKIAVG-PHAP--AMFAR-MSATGILQNAGLPPLV-HL
-----------------------------------------WAFEDAYRYTQNPI-TLMT
VLLGDRALEVGA--S-----------------------LRWTK-EDLALAAFLLKHRNEP
VREKALKR--LLAVKKAP-LDHVLEL----------A-----------------LSQG--
------------------------QVKSANAVEYWDMPM----FPVTG--DDLVEFIAPG
PGMGA-------ALKRMKENW------------------AETNFTATKQQLIVMEEWT--
---------------------------------------------------
>NC_027364_p33
-------------------------MKKYLVGGYVRDRLM------G------LRA-KDK
DYVIVGATESDIKYL-QS-----IGYKQVG----KDFPVYLSPE-GN--EHALARTERKT
GTGYGGFE-VDTK-G-----VTLEQDLYRRDLTINAISYDPV------------LQIHID
PYG-GKADIKNKVLRHVSD-----HFKEDPLRVLRLARFATRYSD--FTIHESTEELAIG
M---VNSGELNHLVPDRVFVEFEKAFSE-EKPA--KFLKT-LSKFGYYEKVFNT-S-LTK
KNLD-LIDYIAENC--------------------TDV--------------YKPY-FLWS
ILLENEEVNNDS---------------------VLNGAIKVPVKYVKFSNYIK-RFRDDI
KTF--RK-------KTPIEMGNILLDMNIKNNGG--EEFL--------------------
--YKVLEYFILRKEID--------LELEDLIIKVYDRYTDVE---LPDIQQMVKDGELET
SEIRD-----------F---------------------VCELRYEAIKQMF---------
---------------------------------------------------
>NC_025447_p532
-------------------------MKKYLVGGYVRDRLM------G------IRA-KDK
DYVIVGASESDLKYL-QS-----IGYKQVG----KDFPVYLSPE-GN--EHALARTERKT
GTGYGGFE-VDTK-G-----VTLEQDLYRRDLTINAIAYDPV------------LQIHID
PYG-GKADIKNKILRHVSD-----HFKEDPLRVLRLARFATRYSD--FTIHESTEELAIG
M---VNSGELNHLVPDRVFVEFEKSFSE-EKPS--KFLKT-LSKFGYYEKVFNT-S-LTK
KNLD-LIDYISDNC--------------------TDV--------------YKPY-FLWS
ILLENEEVNNDS---------------------VLNGAIKVPVKYVKFSNYIK-RFRDDI
KTF--RK-------KTPIEMGNILLDMNIKNNGG--EEFL--------------------
--YKVLEYFILRKEID--------LELEDLIIKVYDRYTDVE---LPDIQQMVKDGELET
SEIRD-----------F---------------------VCELRYEAIKQMF---------
---------------------------------------------------
>KU574722_p192
-------------------------MKKYIVGGFVRDKLL------G------LQP-KDK
DYVLVGAKSKDITYL-ES-----IGYKQVG----ADFPVYLSPE-GD--EYALARIERKT
GTGYDGFT-VETQ-G-----VTLEQDLFRRDLTINAIAWDPI------------TKTHVD
PYN-GKEDLNNKVLKHVSD-----AFKEDPLRVLRLARFAARYSD--FKVHPSTDAMVRK
M---VADGEINHLTKERVYVEFEKAFSE-KTPS--IFLKY-LKDIGALSVLLPT-FNCTA
KDLE-LIDQIVNTC--------------------SEQ--------------YRDE-FIWT
VILSNSTANSEY----------------------IVGGIKLPARMVKFSNFIK-KHAERL
IKF--RK-------QKPEDMVELFTSMNIKNNGG--EEFL--------------------
--YKVTEYFIVRREMD--------NELEDLIVKVFDRFTDAP---IGNIEEMVKTGKLKS
SEIRN-----------Y---------------------IKNIQNIEVKKMFV--------
---------------------------------------------------
>NC_019526_p31
-------------------------MKKYLVGGYCRDRLM------G------LKP-KDK
DYVIVGANESDIKYL-ES-----AGYKQVG----VDFPVYLSPK-GN--EFALARVERKT
GNGYGGFT-VETK-G-----VTLEEDLSRRDLTINSIAYEPL------------MGIHID
PFK-GRDDIKNKILRHTSS-----AFSEDPLRVLRLARFATRFQD--FTIHSDTEQMVID
M---VQSGETDYLVPDRVYVEFKKAFSE-EKPG--RFIKV-LNDIGYIPKVLPK-FKCTK
KNIE-LIDYISMNC--------------------TEQ--------------WKDY-FIWS
VLLQDEITN-------------------------IESKIRVPQKYIKFSSFVD-RMKENI
KTF--RK-------KSVEEMCDILFDMNIKNNGG--EEFL--------------------
--YKVLEYFILRKEID--------VDLEDLIIKVYDRYDSTV---IPDIQEMVKTGELDP
KDIRD-----------F---------------------VQNTRYHEIKKMFI--------
---------------------------------------------------
>KY630187_p188
-------------------------MKKYIVGGFVRDKLL------G------LQP-KDK
DYVLVGAKPKDIEYL-TG-----IGYKQVG----ADFPVFLSPD-GD--EYALARIERKT
GTGYDGFT-VQTQ-G-----VTLEQDLYRRDLTINAIAWDPI------------TKTHVD
PYN-GKVDLQNKVLKHVSE-----AFKEDPLRVLRLARFAARYST--FTIHADTNVMVKE
M---VKNGEINHLTKERVYIEFEKALSE-EKPS--IFFKY-LKDIGALKVLLPT-FEATN
KELE-LIDHIAMNS--------------------TEQ--------------YREE-FIWS
VILSKATPTKDY----------------------VVGGIKLPARFVKFSNFVK-LHSDGL
IKF--RK-------KKPEGMVELFTAMNVKNNGG--EEFL--------------------
--YKVVEYFIIRREID--------IELEDLIMKVYDKFYDAP---VGNIEEMVKTGALEA
ANIRT-----------H---------------------IKTIQVAEIKKMF---------
---------------------------------------------------
>NC_019401_p189
-------------------------MKKYIVGGFVRDKLL------G------LQP-KDK
DYVLVGAKPKDISYL-ES-----IGYKQVG----ADFPVYLSPE-GD--EYALARIERKT
GTGYDGFS-VETQ-G-----VTLEQDLFRRDLTINAIAWDPI------------TKTHID
PYK-GKEDLKNKVLKHVSD-----AFKEDPLRVLRLARFAARYAD--FKVHKDTDSMVRQ
M---VKNGEINHLTKERVYVEFEKAFSE-QKPS--IFLKY-LKDIGALTVLLPG-FDATQ
KELE-LIDHIVNTS--------------------SEQ--------------YRDE-FIWS
VILSKCTANNDY----------------------VVGGIKLPARMVKFSNFIK-KHSENL
LKF--RK-------KKPEEMVELFSAMNVKNNGG--EEFL--------------------
--YKVTEYFIIRREMD--------NELEDLIVKVFDRYTDAP---VGNIEEMVKTGELKS
SDIRN-----------Y---------------------VKDIQLTEVKKMFS--------
---------------------------------------------------
>NC_027399_p2
-------------------------MKKYLVGGYCRDRLM------G------LKP-KDK
DYVIVGANESDIKYL-ES-----AGYKQVG----VDFPVYLSPK-GN--EFALARVERKT
GNGYGGFT-VETK-G-----VTLEEDLSRRDLTINSIAYEPL------------MGIHID
PFK-GRDDIKNKILRHTSS-----AFSEDPLRVLRLARFATRFQD--FTIHSDTEQMVID
M---VQSGETDYLVPDRVYVEFKKAFSE-EKPG--RFIKV-LNDIGYIPKVLPK-FKCTK
KNIE-LIDYISMNC--------------------TEQ--------------WKDY-FIWS
VLLQDEITN-------------------------IESKIRVPQKYIKFSSFVD-RMKENI
KTF--RK-------KSVEEMCDILFDMNIKNNGG--EEFL--------------------
--YKVLEYFILRKEID--------VDLEDLIIKVYDRYDSTV---IPDIQEMVKTGELDP
KDIRD-----------F---------------------VQNTRYHEIKKMFI--------
---------------------------------------------------
>JN849462_p363
------------------MKANLNLMKKYIVGGAVRDSILKHVEGWS------RFP-KDI
DYVVTGCTHEQMM----A-----MYGEPIG----ADFPVWLDKD-GN--EVALARVERST
GGKTTDFT-FTTD-G-----VTLEDDLSRRDLTINSMAIPDMTPNSLFMWGS--TDDVID
PYG-GLDDLKNKILRHTTE-----AFAEDPLRVLRVARFYARYYSMGFTVAEETIELCKK
M---INDGMLENLPKERVWLETQKALSE-KDAH--MYFAF-LGQIGFCAVPSAR-E--LL
-ELK-FYNRMPFKC----------------------E----D---------VQLI-AKWA
SFDHRNR---------------------------YTRKFGATKQFDKASEILM-SLNVAN
--------------AFDETIVIVLRKLGAYKEGLPFEVALS-------------------
---------QVKDEVK--------RKMLIELIELT---------------RNVKVDVEPG
PAYGE-----------A---------------------LEDKRVSIAYNYLHSL------
---------------------------------------------------
>KT919972_p102
------------------MKAKMNLMQKYIVGGAVRDSILKHVDGWS------SFP-KDI
DYVVTGCTHEQMM----S-----MYGEPIG----ADFPVWLDRN-NN--EVALARVERST
GGKTTDFT-FTTE-G-----VTLEDDLSRRDLTINSMAIPDMTPNSLFMFGS--TDDVID
PYG-GLDDLKNKILRHTTE-----AFAEDPLRVLRVARFYARYYSMGFTVAEETVELCKK
M---INDGMLENLPKERVWLETQKALSE-KDAH--MYFAF-LGRVGFCSVPSSR-E--LL
-ELK-YYNRMPFKC----------------------E----D---------VQII-AKWA
SFDHRNR---------------------------YTRKFGATKQYDKASELLM-SLNVAN
--------------VFDETIVIVLRKLGAYKEGLLFEVALS-------------------
---------QVKDVVK--------RQIITDLIELT---------------RNVKVDVEPG
PEYGA-----------A---------------------LEDARMSIAYDYLHCL------
---------------------------------------------------
>KT919973_p230
------------------MKAKMNLMQKYIVGGAVRDSILKHVDGWS------SFP-KDI
DYVVTGCTHEQMM----S-----MYGEPIG----VDFPVWLDKD-NN--EVALARVERST
GGKTTDFT-FTTE-G-----VTLEDDLSRRDLTINSMAIPDMTPNSLFMFGS--TDDVID
PYG-GLDDLKNKILRHTTE-----AFAEDPLRVLRVARFYARYYSMGFTVAEETIELCKK
M---INNGMLDNLPKERVWLETQKALSE-KDAH--MYFVF-LSQVGFSPRPTVH-E--LQ
-SLR-HFRRMAFHC----------------------E----D---------VQLM-AKWA
ALNRRQR---------------------------FGSYFGETKQFRKASQMLM-ELEYAS
--------------VFDETIILILEKIGAYKGHLPFQVALS-------------------
---------QITDEVK--------RNVITEIIDLT---------------RNVKVDVEPG
PAYGE-----------A---------------------LTDERVNIAYKYLHSL------
---------------------------------------------------
>NC_028829_p280
------------------MKAKMNLMQKYIVGGAVRDSILKHVDGWS------SFP-KDI
DYVVTGCTHEQMM----S-----MYGEPIG----VDFPVWLDKD-NN--EVALARVERST
GGKTTDFT-FTTE-G-----VTLEDDLSRRDLTINSMAIPDMTPNSLFMFGS--TDDVID
PYG-GLDDLKNKILRHTTE-----AFAEDPLRVLRVARFYARYYSMGFTVAEETVDLCKK
M---INDGMLENLPKERVWLETQKALSE-KDAH--MYFVF-LSQIGFSPRPYAH-E--IH
-SLR-HFRRMPFHC----------------------E----D---------DQLM-AKWA
ALNRRRR---------------------------FGSYFGETKKFRKASEILM-KLEYAS
--------------VFDETIILILETIGAYKGHLPFQVALS-------------------
---------QITDEVK--------RNVITEIIDLT---------------RNVKVDVEPG
PAYGE-----------A---------------------LTDERVNIAYKYLHSL------
---------------------------------------------------
>AP018399_p446
-------------------------MQKFMVGGAVRDKLM------G------LEP-KDV
DFVVVGSTPEAML----A-----AGFQQVG----ADFPVFLDKD-GV--EHALARTERKS
GHGYNGFV-TDHSAD-----VKLEDDLMRRDLTVNAMAMSG--------------NFVVD
PFG-GQEDMKNKVLRHVSP-----AFADDPVRVLRLARFHARFGPE-WLVHTDTVLFARK
M---AAEGELKHLTRERVLKELEKALGE-PHPK--LFFDT-LKLCNALEEVLPE-VAAVH
DKVD-FV---------LV----RF------------P----H---------VSAK-FKYA
SISKHMKDADAF-----------------------ETRLNVSTEWRKFAKMYR-NLFRPD
--------------VPQPTAVDSLYAIDAYRQA---DLFEELVEDFRKTDALKYF-----
-------------------------QFFVDAFEKTRHVS-------FASLTPEQQATLKG
PAIAE-----------A---------------------IKAHRIALLEQPE---------
---------------------------------------------------
>NC_023688_p288
-------------------------MNIYLVGGAVRDMVM------N------REP-KDR
DYVVVGSTHDEMI----A-----KGYKQVG----ADFPVYLDH-LGQ--EYALARTERST
GKGYNDFV-TDFNPN-----VTLEQDLKRRDFTMNAMALG-L------------NGVVVD
PYN-GQQDIKDRVVNVVNP----QAFHEDPVRVLRACRFAARYDF---RLSTLTMECILR
C---IKDGRMEHLTSERIWLEFEKSFG--SKFD--DFLAH-LTLSGAVKALDIG-GRFVN
DVKI-NTLWMDHGH----------------------K----N--------SSPVEQFAAM
INHMDMKARD-H----------------------FYSIVKVPCEFKKFVDIVR-NSLQ--
---------------DSALNVRLYTALNSTRNKF-----RE-------------------
---EIKNYFVDENEVS--------KEKFEAAEKAFDSVS-----------AI-N-YYLKG
KELGN-----------A---------------------MMCDRINKIADVLVK-------
---------------------------------------------------
>NC_005260_p308
-------------------------MNIYLVGGAVRDMVM------N------REP-KDR
DYVVVGSTHDEMI----A-----KGYKQVG----ADFPVYLDH-LGQ--EYALARTERST
GKGYNDFV-TDFNPN-----VTLEQDLKRRDFTMNAMALG-M------------NGVVID
PYN-GQQDIKERVVNVVNP----QAFHEDPVRVLRACRFAARYDF---RLSTLTMECILR
C---IKDGRMDHLTSERIWLEFEKSFG--TKFD--DFLAH-LTLSGAVKALDIG-GRFVN
DVKI-NTLWMDHGH----------------------K----N--------SSPVEQFAAM
INHMDTKARD-H----------------------FYSIVKVPCEFKKFADIVR-NSLQ--
---------------DSALNVRLYTALNSTRNKF-----RE-------------------
---EIKNYFVDENEVS--------KEKFEAAEKAFDSVS-----------AM-N-YYLKG
KELGH-----------A---------------------MMCDRINKIADVLVK-------
---------------------------------------------------
>MG250483_p288
-------------------------MNIYLVGGAVRDMVM------N------RQP-KDR
DYVIVGSTHDEMI----A-----KGYKQVG----ADFPVYLDD-LGQ--EYALARTERST
GKGYNDFV-TDFNPN-----VTLEQDLLRRDFTMNAMALG-M------------NGVLVD
PYN-GQQDIKDRVVNVVNP----QAFHEDPVRVLRACRFAARYDF---RLSTLTLECILR
C---IKDGRMDHLTSERIWLEFEKSFG--KNMS--DFLMN-MHCTGAFKALGIH-A----
-------GWTIHRH----------------------G----N--------GAPVEQFAAI
AYDMNTEQLA-K----------------------FYSVVKVPSEFKKFADIVK-NSLQ--
---------------DTALNVRLYTALNATRNKF-----RE-------------------
---EIKNYFVDENQVS--------KEKFESAEKAFDSVV-----------AS-A-YSEQG
KELGR-----------A---------------------MMCDRINRIADALVK-------
---------------------------------------------------
>NC_014636_p88
-------------------------MDIYLVGGAVRDMVM------G------VEP-KDR
DYVVVGATHEDMM----E-----AGYQKVG----ADFPVYLDD-LGQ--EYALARTERST
GKGYNDFV-TDFNPR-----VTLEEDLKRRDFTMNAMALN-F------------NGVVVD
PYG-GQKDIKAGVINVVNE----HAFHEDPVRAFRACRFGARYDM---RLSEMTIECIDR
C---IEDGRMAHLTTERIWKEYEKAFG--PKFS--EFIFL-TKVTGVDQALGYN-LEYGN
L----------RYL----------------------R----Q--------ADPLLQFASV
ALASDM---A-P----------------------FYKVAKVPSDYKKFAMIAA-KFFVPM
G-----EK----IDHNADYSSIVYHMLNATKDKF-----RE-------------------
---ELFELIDLTHWVDLNDVFRFTKEKLKKIEKAFDSVT-----------SE-QYSGISG
PELGK-----------A---------------------IQLGRIEAIKAAMR--------
---------------------------------------------------
>KU160494_p172
-----------------------MQEKVYLVGGAVRDSLM------N------REI-NDR
DYVVVGSTIEKWD---ND-----STANRVG----KSFPVYLKD--GC--EYALARVERST
GKGYNDFE-CDVQ-N-----VTIEQDLFRRDFTINAIAFDET------------TLQLID
PYG-GASDIRNKIIRCVNP----DCFADDPIRILRAARFAARYGF---TIEPKTLELMRG
F-------NIQQTGMCRIALEFEKSFEDGHDCL--EAMSN-ILIDCKVSINGVQ-LTHPR
G-FE-LKDYIRVMC----------------------D----Y--------FDPFVFVCLA
LLQRNGDSYTCN----------------------KFLNLVLSKDYKSAMNMFR-LWNGPD
A-F--ENR----VYKSTMRYVSLFDDTSF-------------------------------
---DEIFHRIADYYNEYKHTARHYTEYDKIKTMAVRSVK-----------NDE-------
------------------------------------------------------------
---------------------------------------------------
>p416860 VI_04605
------------------------------------------------------------
------------------------------------------------------------
-------KSVSFV-------RSLEEDLKRRDFTVNAFALAED-------------AQVID
LFD-GLADLENQVLRAVGKAE--ERFSEDALRIMRGLRFAASLD---FAIEDQTFAAMKT
Y-----APLLEKISVERSFIEFDKLLTA-PHWQ--QGLAA-LIDAGVYDYLPDLR-----
---------------------NKSQQLASMLEDYADDFVF-----------ATSE-QAWS
ALCLALKIRD----C-----------------KPFLKKWKTSSHIQKTVTDLV-SI----
--Y--RHR--LQTSHNKQTIYR----------------YGKELAELAENLRQGQGLAV--
------------DFDL--------ISQLDASLLIHDKKE----IVVNGCLLMKDLGLKPG
PTLGQ-------LLNQIEAAI------------------VEGDLANQQEAIL---DFVRD
RSK------------------------------------------------
>NC_023719_p191
-MMIKIH-----QDVRELLNELNEIDESIIFGGYLRDMIF------D------NIP-NDV
DIA-TKVPIDILV---EKYGHLEKAKKRKTTSG------------QDVFSFKMHRTEKIF
VEI------VCTQ-------DDLYDKARKADYTLNSLLYDG--------------KNLID
LQG-GLDDISNKLIREVDARIITKDLETRPYLWLKTLRLISVTGF---DLSDETFSVLNE
N-----KKCIYNISNEIMQTEGHKTLNG-LNPF--KAIEL-LHKMGFVASFDVKHFKEIK
YSLQ----------------PQQQLCLLAVLSNKEII---------------DDF-INFY
HLQQDLKEKYDK--LYSM----------------YHGEDKVPSRFRHQIITIK-KIVKEM
ESN---------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------
>MF988720_p123
------------------MSNVILEGKTFVVGGFVRNHLL------N------IEV-NDI
DIVVVGSHHEEMI----S-----LGFEQVG----KAFPVYLHPETGD--EFALARKEVST
GDGHQDFE-FHTE-D-----VTLEEDLFRRDFTMNAMAMPVEVHSSGSYNID--TTTLID
PYK-GKSDLDAEILRPVSD-----HFMEDPLRILRAVRFRCQYGFV-FSTCLVNVVTTIA
M---RTPNLLEELSQERVLAELDKIARS-AYPE--YVMPY-LRLFTPFDSVMFS-I----
-----TQDNITGLN--------LFSQVENTLKYAGYS----D-------YRVRLV-LFYA
TLLLATDKKSFD---------------------DWIDKVKFSKELKRQLTLLC-RFHRII
TIY--RSPLKSTSGIDVARMLKSDKDLLLVFQ-------WG-MVLKRFYTSVFKKTQI--
------------------------NT---LIKSVKDSYN---ILKSEGHSEAMRKLAEEG
QTSNPDFFVVGKPTKED---------------------FLECSYWYIKNELEK-------
---------------------------------------------------