ID |
Definition |
Evalue |
posQ/posS |
PF08822.10 |
Protein of unknown function (DUF1804) |
5.4E-09 |
25-133 / 2-109 |
PF01710.15 |
Transposase |
1.8E-08 |
25-133 / 2-99 |
PF00292.17 |
'Paired box' domain |
1.8E-08 |
22-72 / 14-61 |
PF04936.11 |
Protein of unknown function (DUF658) |
2.7E-07 |
44-132 / 14-116 |
PF04552.12 |
Sigma-54, DNA binding domain |
7.8E-06 |
23-69 / 28-73 |
PF09607.9 |
Brinker DNA-binding domain |
3.1E-05 |
24-70 / 4-51 |
PF07750.10 |
GcrA cell cycle regulator |
3.2E-05 |
26-70 / 3-45 |
PF13011.5 |
leucine-zipper of insertion element IS481 |
3.3E-05 |
25-72 / 7-52 |
PF12759.6 |
InsA C-terminal domain |
4.2E-05 |
26-68 / 6-45 |
PF07141.10 |
Putative bacteriophage terminase small subunit |
4.4E-05 |
34-70 / 21-57 |
PF05344.10 |
Domain of Unknown Function (DUF746) |
0.00011 |
36-71 / 4-39 |
PF06056.11 |
Putative ATPase subunit of terminase (gpP-like) |
0.00012 |
34-71 / 3-40 |
PF16087.4 |
Domain of unknown function (DUF4817) |
0.00015 |
36-72 / 8-52 |
PF06627.10 |
Protein of unknown function (DUF1153) |
0.0002 |
18-72 / 22-74 |
PF10668.8 |
Phage terminase small subunit |
0.00027 |
34-72 / 9-50 |
PF13542.5 |
Helix-turn-helix domain of transposase family ISL3 |
0.00029 |
25-68 / 11-50 |
PF10654.8 |
Protein of unknown function (DUF2481) |
0.00034 |
34-67 / 70-103 |
PF02796.14 |
Helix-turn-helix domain of resolvase |
0.0004 |
35-67 / 12-44 |
PF15978.4 |
Tn7-like transposition protein D |
0.00041 |
25-71 / 186-230 |
PF13936.5 |
Helix-turn-helix domain |
0.00054 |
34-67 / 10-43 |
PF11427.7 |
Tc3 transposase |
0.00065 |
34-69 / 10-45 |
PF06322.10 |
Phage NinH protein |
0.00067 |
42-70 / 14-42 |
PF16677.4 |
DNA-packaging protein gp3 |
0.00069 |
25-68 / 5-53 |
PF04218.12 |
CENP-B N-terminal DNA-binding domain |
0.00071 |
34-69 / 12-48 |
PF13613.5 |
Helix-turn-helix of DDE superfamily endonuclease |
0.00092 |
42-69 / 17-44 |
PF03333.12 |
Adhesin biosynthesis transcription regulatory protein |
0.00094 |
24-69 / 38-80 |
PF01527.19 |
Transposase |
0.00097 |
26-69 / 5-46 |
PF14493.5 |
Helix-turn-helix domain |
0.00098 |
37-71 / 5-39 |
PF13309.5 |
HTH domain |
0.001 |
25-66 / 19-63 |
PF08765.10 |
Mor transcription activator family |
0.0012 |
37-69 / 66-97 |
PF12824.6 |
Mitochondrial ribosomal protein subunit L20 |
0.0014 |
23-67 / 86-130 |
PF13518.5 |
Helix-turn-helix domain |
0.0018 |
36-72 / 4-39 |
PF13384.5 |
Homeodomain-like domain |
0.002 |
35-68 / 8-41 |
PF05331.10 |
Protein of unknown function (DUF742) |
0.0021 |
24-71 / 37-80 |
PF13412.5 |
Winged helix-turn-helix DNA-binding |
0.0022 |
43-70 / 16-43 |
PF07638.10 |
ECF sigma factor |
0.0027 |
26-68 / 134-173 |
PF02954.18 |
Bacterial regulatory protein, Fis family |
0.0029 |
43-67 / 15-39 |
PF13551.5 |
Winged helix-turn helix |
0.003 |
41-72 / 8-39 |
PF13556.5 |
PucR C-terminal helix-turn-helix domain |
0.0034 |
42-70 / 10-38 |
PF17443.1 |
Uncharacterized protein pXO2-72 |
0.0035 |
43-68 / 7-32 |
PF05225.15 |
helix-turn-helix, Psq domain |
0.0035 |
42-68 / 14-41 |
PF13411.5 |
MerR HTH family regulatory protein |
0.0047 |
46-70 / 2-26 |
PF01371.18 |
Trp repressor protein |
0.0055 |
40-69 / 44-73 |
PF13022.5 |
Helix-turn-helix of insertion element transposase |
0.0056 |
44-66 / 25-47 |
PF08281.11 |
Sigma-70, region 4 |
0.0058 |
34-68 / 16-50 |
PF01381.21 |
Helix-turn-helix |
0.006 |
42-67 / 7-32 |
PF07453.12 |
NUMOD1 domain |
0.0059 |
45-65 / 20-40 |
PF16509.4 |
TrfB plasmid transcriptional repressor |
0.0061 |
34-69 / 21-56 |
PF02001.15 |
Protein of unknown function DUF134 |
0.007 |
23-69 / 29-72 |
PF13404.5 |
AsnC-type helix-turn-helix domain |
0.0072 |
43-68 / 16-41 |
PF00376.22 |
MerR family regulatory protein |
0.0077 |
47-68 / 2-23 |
PF06806.11 |
Putative excisionase (DUF1233) |
0.0077 |
45-66 / 10-31 |
PF04545.15 |
Sigma-70, region 4 |
0.0081 |
42-68 / 22-48 |
PF11112.7 |
Pyocin activator protein PrtN |
0.0083 |
43-68 / 12-38 |
PF00356.20 |
Bacterial regulatory proteins, lacI family |
0.0084 |
46-67 / 1-22 |
PF08535.9 |
KorB domain |
0.0089 |
43-70 / 2-29 |