phrog_24030 is made of 3 protein sequences and is annotated as "RNA ligase"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
351 401 342


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_021328_p200 YP_008059408.1 HNH protein NC_021328 Halovirus HGTV-1 Viruses; unclassified viruses; unclassified DNA viruses; unclassified archaeal dsDNA viruses; Haloviruses.
MF360958_p101 ASV44116.1 hypothetical protein MF360958 Salicola phage SCTP-2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
KU935715_p261 AND75422.1 putative RNA ligase KU935715 Acinetobacter phage vB_AbaM_ME3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Metrivirus; Acinetobacter virus ME3.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
no colocalized PHROGS                                                                                          

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 98.0 1E-08 8-63 / 21-80
phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 94.1 0.0051 8-65 / 137-200
phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 97.8 3E-08 7-64 / 51-112
phrog_15103 no annotation unknown function 95.5 0.00053 8-62 / 190-251
phrog_16726 HNH endonuclease DNA, RNA and nucleotide metabolism 90.7 0.049 4-61 / 66-126
phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 90.8 0.046 6-97 / 82-174
phrog_2214 HNH endonuclease DNA, RNA and nucleotide metabolism 94.4 0.0033 3-87 / 20-97
phrog_24252 HNH endonuclease DNA, RNA and nucleotide metabolism 90.7 0.048 4-61 / 1-68
phrog_3106 HNH endonuclease DNA, RNA and nucleotide metabolism 91.5 0.034 18-62 / 44-103
phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 94.4 0.0033 8-61 / 18-69
phrog_34045 no annotation unknown function 100.0 9.3E-58 134-342 / 6-209
phrog_3497 no annotation unknown function 93.9 0.0064 18-61 / 26-96
phrog_4581 terminase small subunit head and packaging 96.8 7.9E-06 8-61 / 52-104
phrog_548 RNA ligase DNA, RNA and nucleotide metabolism 98.2 1.2E-09 160-278 / 26-160
phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 97.2 1.3E-06 7-61 / 39-95
phrog_5956 HNH endonuclease DNA, RNA and nucleotide metabolism 95.7 0.00032 14-67 / 2-59
phrog_7370 HNH endonuclease DNA, RNA and nucleotide metabolism 97.2 1.4E-06 11-64 / 34-85
phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 95.9 0.00021 4-65 / 4-69
phrog_7785 HNH endonuclease DNA, RNA and nucleotide metabolism 95.4 0.00077 3-62 / 54-109
phrog_8048 HNH endonuclease DNA, RNA and nucleotide metabolism 95.6 0.00046 10-64 / 19-78
phrog_8446 HNH endonuclease DNA, RNA and nucleotide metabolism 97.9 2.3E-08 8-66 / 119-188
phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 96.3 5.7E-05 111-276 / 114-345

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF09511.9 RNA ligase 1E-17 180-338 / 44-230
PF05315.10 ICEA Protein 3.7E-06 19-81 / 77-149
PF01844.22 HNH endonuclease 4.4E-06 38-80 / 1-46
PF09414.9 RNA ligase 8.4E-06 182-335 / 2-182
PF13395.5 HNH endonuclease 8.9E-06 38-82 / 1-51
PF05766.11 Bacteriophage Lambda NinG protein 1.3E-05 23-81 / 74-135
PF16542.4 PNKP adenylyltransferase domain, ligase domain 6.7E-05 309-341 / 264-298
PF14279.5 HNH endonuclease 6.7E-05 38-82 / 1-45
PF09665.9 Type II restriction endonuclease (RE_Alw26IDE) 9.1E-05 35-84 / 253-298
PF13391.5 HNH endonuclease 0.00017 38-83 / 1-46
PF06147.10 Protein of unknown function (DUF968) 0.0018 34-81 / 126-173
PF01331.18 mRNA capping enzyme, catalytic domain 0.0076 178-262 / 13-95

Annotations of the NCBI proteins of this PHROG


1:RNA ligase 1:hypothetical protein 1:HNH protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0004484 mRNA guanylyltransferase activity
GO:0006370 7-methylguanosine mRNA capping
GO:0004519 endonuclease activity
GO:0003676 nucleic acid binding

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