phrog_2484 is made of 59 protein sequences and is annotated as "RecJ-like ssDNA exonuclease"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
587.75 972 569


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
JX486088_p88 AFU63155.1 single-stranded-DNA exonuclease JX486088 Lactobacillus phage ATCC 8014-B2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tybeckvirinae; Douglaswolinvirus; Lactobacillus virus B2.
MG765274_p36 AVH85610.1 hypothetical protein MG765274 Lactobacillus phage Maenad Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tybeckvirinae; Maenadvirus; Lactobacillus virus Maenad.
MG744354_p39 AUV57287.1 hypothetical protein MG744354 Lactobacillus phage Satyr Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tybeckvirinae; Maenadvirus; Lactobacillus virus Satyr.
KX223815_p64 ANO57993.1 single-stranded-DNA-specific exonuclease KX223815 Lactobacillus phage P1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tybeckvirinae; Maenadvirus; Lactobacillus virus P1.
MG252693_p43 ATW59460.1 single-strand DNA-specific exonuclease MG252693 Lactobacillus phage Lenus Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tybeckvirinae; Lenusvirus; Lactobacillus virus Lenus.
MG765276_p43 AUV59803.1 hypothetical protein MG765276 Lactobacillus phage Nyseid Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tybeckvirinae; Lenusvirus; Lactobacillus virus Nyseid.
KU052488_p77 ALY06898.1 single-stranded-DNA-specific exonuclease KU052488 Lactobacillus phage SA-C12 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tybeckvirinae; Lenusvirus; Lactobacillus virus SAC12.
NC_009760_p215 YP_001429805.1 RecJ NC_009760 Bacillus phage 0305phi8-36 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p197985 no NCBI prot ID no annotation VI_05564 Betaproteobacteria_gi_485458331_0_36835 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p61229 no NCBI prot ID no annotation VI_04249 Alphaproteobacteria_gi_485050827_10807_62500 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
KY554769_p66 ARM66371.1 single stranded DNA specific exonuclease KY554769 Lactococcus phage AM2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KY554777_p72 ARM67642.1 single stranded DNA specific exonuclease KY554777 Lactococcus phage LW81 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KY554770_p66 ARM66548.1 single stranded DNA specific exonuclease KY554770 Lactococcus phage AM3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_015263_p62 YP_004306222.1 putative single-stranded DNA exonuclease NC_015263 Lactococcus phage 949 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_023574_p77 YP_009006955.1 putative single stranded exonuclease NC_023574 Lactococcus phage phiL47 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
KY554776_p67 ARQ95646.1 single stranded DNA specific exonuclease KY554776 Lactococcus phage AM12 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KY554772_p70 ARM66923.1 single stranded DNA specific exonuclease KY554772 Lactococcus phage AM5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p24355 no NCBI prot ID no annotation VI_04553 Bacilli_gi_356908030 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_013155_p30 YP_003127317.1 putative single-stranded DNA specific exonuclease NC_013155 Lactococcus virus CB13 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus.
KC522412_p28 AGE60664.1 single stranded DNA specific exonuclease KC522412 Lactococcus phage CaseusJM1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
KY554774_p67 ARM67280.1 single stranded DNA specific exonuclease KY554774 Lactococcus phage AM9 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_023007_p107 YP_008873349.1 hypothetical protein NC_023007 Bacillus phage vB_BanS-Tsamsa Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
KY554775_p66 ARM67458.1 single stranded DNA specific exonuclease KY554775 Lactococcus phage AM11 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_028749_p128 YP_009194178.1 putative single-stranded DNA-specific exonuclease NC_028749 Brevibacillus phage Sundance Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_027341_p66 YP_009147723.1 ssDNA exonuclease NC_027341 Lactococcus phage WRP3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
KT070867_p90 AKQ08405.1 single-stranded-DNA-specific exonuclase RecJ KT070867 Bacillus phage PBC2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KY554773_p66 ARM67101.1 single stranded DNA specific exonuclease KY554773 Lactococcus phage AM8 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KY554771_p31 ARM66690.1 single stranded DNA specific exonuclease KY554771 Lactococcus phage AM4 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KY554768_p67 ARM66194.1 ssDNA exonuclease KY554768 Lactococcus phage AM1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_001884_p132 NP_046684.1 putative ss-DNA-specific endonuclease NC_001884 Bacillus virus SPbeta Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Spbetavirus.
p28052 no NCBI prot ID no annotation VI_00883 Bacilli_gi_485455515 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Spbetavirus; Bacillus virus SPbeta.
NC_029073_p97 YP_009223804.1 putative single stranded DNA exonuclease NC_029073 Geobacillus virus E3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
MF001358_p168 ASZ76834.1 hypothetical protein MF001358 Enterococcus phage EF1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p435372 no NCBI prot ID no annotation VI_05265 Bacilli_gi_501044670 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_023582_p72 YP_009007735.1 repair exonuclease NC_023582 Staphylococcus phage vB_SepS_SEP9 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sextaecvirus.
p227236 no NCBI prot ID no annotation VI_04874 Bacilli_gi_420233404 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p393392 no NCBI prot ID no annotation VI_04870 Bacilli_gi_420219606 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Spbetavirus; Bacillus virus SPbeta.
MF001361_p153 ASZ77528.1 hypothetical protein MF001361 Enterococcus phage EF5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p12809 no NCBI prot ID no annotation VI_00893 Bacilli_gi_323650955 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p230763 no NCBI prot ID no annotation VI_04644 Bacilli_gi_418281068 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p296480 no NCBI prot ID no annotation VI_05035 Bacilli_gi_481024309 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p286150 no NCBI prot ID no annotation VI_04789 Bacilli_gi_510813841 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_024355_p95 YP_009042601.1 hypothetical protein NC_024355 Staphylococcus phage 6ec Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sextaecvirus.
p338360 no NCBI prot ID no annotation VI_05037 Bacilli_gi_481024565 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
MF547663_p77 AUO78467.1 single-stranded-DNA-specific exonuclease MF547663 Clostridioides phage LIBA2945 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p372557 no NCBI prot ID no annotation VI_05268 Bacilli_gi_501061853 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Spbetavirus; Bacillus virus SPbeta.
p13871 no NCBI prot ID no annotation VI_00993 Bacilli_gi_526444490 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p30382 no NCBI prot ID no annotation VI_05871 Clostridia_gi_544969844 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p296151 no NCBI prot ID no annotation VI_05045 Bacilli_gi_481024830 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p248669 no NCBI prot ID no annotation VI_00476 Bacilli_gi_397738376 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
MF547662_p78 AUO78296.1 single-stranded-DNA-specific exonuclease MF547662 Clostridioides phage LIBA6276 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_029119_p2 YP_009226678.1 single-strand DNA-specific exonuclease YorK NC_029119 Staphylococcus phage SPbeta-like Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
KY030782_p140 APD21283.1 single-stranded DNA-specific exonuclease KY030782 Bacillus phage phi3T Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Spbetavirus; unclassified Spbetavirus.
p223696 no NCBI prot ID no annotation VI_04797 Bacilli_gi_418954000 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p167958 no NCBI prot ID no annotation VI_05058 Bacilli_gi_483992947_10153_49378 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Spbetavirus; Bacillus virus SPbeta.
NC_026609_p45 YP_009126487.1 single-stranded-DNA-specific exonuclease NC_026609 Lactobacillus phage Ldl1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tybeckvirinae; Lidleunavirus; Lactobacillus virus Ldl1.
p55509 no NCBI prot ID no annotation VI_00454 Bacilli_gi_262046743_72999_126896 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p57109 no NCBI prot ID no annotation VI_00781 Bacilli_gi_551717241_407555_460919 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p56075 no NCBI prot ID no annotation VI_00457 Bacilli_gi_423321503_348617_402292 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_47 1455 DNA primase DNA, RNA and nucleotide metabolism 38 4.35E-80 70.48
phrog_392 321 metal-dependent hydrolase other 10 3.72E-24 14.55
phrog_6484 19 no annotation unknown function 9 4.10E-35 25.51
phrog_405 315 DNA polymerase DNA, RNA and nucleotide metabolism 8 2.90E-19 9.66
phrog_19051 4 no annotation unknown function 4 0 1000
phrog_5105 26 no annotation unknown function 4 1.56E-15 5.93
phrog_23668 3 no annotation unknown function 3 0 1000
phrog_33561 2 no annotation unknown function 2 0 1000
phrog_24165 3 no annotation unknown function 2 1.73E-12 2.88
phrog_36796 2 no annotation unknown function 2 0 1000
phrog_37396 2 no annotation unknown function 2 0 1000
phrog_35990 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_4771 DHH phosphoesterase other 98.1 2.8E-09 64-432 / 4-286

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF01368.19 DHH family 1.7E-11 105-236 / 1-130
PF10141.8 Single-strand DNA-specific exonuclease, C terminal domain 5.6E-10 650-791 / 58-204
PF02272.18 DHHA1 domain 0.0056 410-462 / 73-132

Annotations of the NCBI proteins of this PHROG


10:single stranded DNA specific exonuclease 6:hypothetical protein 5:single-stranded-DNA-specific exonuclease 2:ssDNA exonuclease 2:single-stranded DNA-specific exonuclease 1:single-stranded-DNA-specific exonuclase RecJ 1:single-strand DNA-specific exonuclease 1:single-stranded DNA exonuclease 1:single-stranded-DNA exonuclease 1:ss-DNA-specific endonuclease 1:single-strand DNA-specific exonuclease YorK 1:single stranded exonuclease 1:single-stranded DNA specific exonuclease 1:repair exonuclease 1:single stranded DNA exonuclease 1:RecJ 1:protein of an unannotated phage

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K07462 recJ : single-stranded-DNA-specific exonuclease [EC:3.1.-.-] ko03410 Base excision repair
ko03430 Mismatch repair
ko03440 Homologous recombination
1180 59

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0003676 nucleic acid binding

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