phrog_2538 is made of 57 protein sequences and is annotated as "terminase small subunit"
Functional category: head and packaging


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
128.6 175 120


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p133796 no NCBI prot ID no annotation VI_05051 Bacilli_gi_483984334 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_028671_p36 YP_009188833.1 hypothetical protein NC_028671 Enterococcus phage vB_EfaS_IME197 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
KY653117_p39 ARM67859.1 terminase small subunit KY653117 Staphylococcus phage IME1323_01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p153335 no NCBI prot ID no annotation VI_00728 Bacilli_gi_510804365_420471_460981 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p153382 no NCBI prot ID no annotation VI_00729 Bacilli_gi_510932088_850646_891156 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p173014 no NCBI prot ID no annotation VI_00727 Bacilli_gi_510799013_2602180_2640899 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p175497 no NCBI prot ID no annotation VI_05314 Bacilli_gi_510932048_1372592_1411116 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KY653120_p36 ARM68050.1 terminase small subunit KY653120 Staphylococcus phage IME1348_01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus; unclassified Phietavirus.
NC_007059_p1 YP_240380.1 ORF041 NC_007059 Staphylococcus virus 71 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus.
p125158 no NCBI prot ID no annotation VI_04833 Bacilli_gi_419768752 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_007065_p1 YP_240815.1 ORF041 NC_007065 Staphylococcus virus X2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus.
p139573 no NCBI prot ID no annotation VI_04872 Bacilli_gi_420225008_3736_45574 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_007056_p1 YP_240150.1 ORF036 NC_007056 Staphylococcus virus EW Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus.
KY653129_p34 ARM68503.1 hypothetical protein KY653129 Staphylococcus phage IME1365_01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus; unclassified Phietavirus.
p288575 no NCBI prot ID no annotation VI_04680 Bacilli_gi_418447335 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p62038 no NCBI prot ID no annotation VI_01275 Clostridia_gi_548208793 Viruses.
NC_018284_p1 YP_006561163.1 terminase smal subunit NC_018284 Staphylococcus virus IPLA7 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus.
NC_007058_p1 YP_240306.1 ORF034 NC_007058 Staphylococcus phage ROSA Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus; unclassified Phietavirus.
p117923 no NCBI prot ID no annotation VI_04548 Bacilli_gi_417659246 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p287797 no NCBI prot ID no annotation VI_04559 Bacilli_gi_417752159_1026_28537 Viruses.
NC_018264_p35 YP_006546304.1 hypothetical protein NC_018264 Thermoanaerobacterium phage THSA-485A Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p260109 no NCBI prot ID no annotation VI_05344 Bacilli_gi_544867302 Viruses; unclassified bacterial viruses.
p214262 no NCBI prot ID no annotation VI_00869 Bacilli_gi_251781468_1569185_1604459 Viruses.
p184646 no NCBI prot ID no annotation VI_00847 Bacilli_gi_409913960_982600_1020388 Viruses; unclassified bacterial viruses.
p149771 no NCBI prot ID no annotation VI_00952 Bacilli_gi_508126650_849452_890319 Viruses.
p252576 no NCBI prot ID no annotation VI_04365 Bacilli_gi_56808948 Viruses; unclassified bacterial viruses.
NC_028700_p35 YP_009191704.1 putative terminase small subunit NC_028700 Streptococcus phage T12 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p184586 no NCBI prot ID no annotation VI_00985 Bacilli_gi_71909814_983899_1021692 Viruses; unclassified bacterial viruses.
p408824 no NCBI prot ID no annotation VI_04997 Bacilli_gi_452730163 Viruses.
p184526 no NCBI prot ID no annotation VI_00118 Bacilli_gi_523414886_1002676_1040469 Viruses; unclassified bacterial viruses.
NC_004588_p26 NP_795630.1 hypothetical protein NC_004588 Streptococcus phage 315.5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p182111 no NCBI prot ID no annotation VI_00755 Bacilli_gi_28894912_545611_583628 Viruses; unclassified bacterial viruses.
p182000 no NCBI prot ID no annotation VI_00751 Bacilli_gi_21909536_1313257_1351275 Viruses; unclassified bacterial viruses.
p145013 no NCBI prot ID no annotation VI_04978 Bacilli_gi_452729404_7_41317 Viruses.
p214957 no NCBI prot ID no annotation VI_05046 Bacilli_gi_407979928 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p124020 no NCBI prot ID no annotation VI_05756 Clostridia_gi_153883810 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p352257 no NCBI prot ID no annotation VI_01147 Clostridia_gi_424828341 Viruses.
p122769 no NCBI prot ID no annotation VI_05802 Clostridia_gi_483046904_0_43059 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p203799 no NCBI prot ID no annotation VI_06208 Clostridia_gi_399579249 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
KU678391_p1 AMQ65794.1 hypothetical protein KU678391 Streptococcus virus 9873 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KX160218_p32 ANT44057.1 hypothetical protein KX160218 Lactococcus phage 98204 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p380533 no NCBI prot ID no annotation VI_00929 Bacilli_gi_522836001 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KX160216_p30 ANT43950.1 hypothetical protein KX160216 Lactococcus phage 98202 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_031094_p1 YP_009289353.1 hypothetical protein NC_031094 Streptococcus virus 9872 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
KX879641_p1 APC45773.1 hypothetical protein KX879641 Streptococcus phage CHPC577 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p233308 no NCBI prot ID no annotation VI_00719 Bacilli_gi_505865337_25600_59139 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KX160217_p28 ANT44001.1 hypothetical protein KX160217 Lactococcus phage 98203 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_031069_p1 YP_009286828.1 hypothetical protein NC_031069 Streptococcus virus 9871 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
JX564242_p31 AFV51060.1 hypothetical protein JX564242 Lactococcus phage Q33 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KX160211_p28 ANT43677.1 small terminase KX160211 Lactococcus phage 62503 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_021861_p33 YP_008320175.1 hypothetical protein NC_021861 Lactococcus phage BM13 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
KX160210_p30 ANT43627.1 terminase small subunit KX160210 Lactococcus phage 62502 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KX160209_p27 ANT43575.1 small terminase KX160209 Lactococcus phage 58502 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KX160206_p27 ANT43417.1 terminase small subunit KX160206 Lactococcus phage 50902 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p55652 no NCBI prot ID no annotation VI_05242 Bacilli_gi_458798330_349456_403365 Viruses.
NC_028930_p92 YP_009210612.1 DNA binding domain protein NC_028930 Paenibacillus phage Tripp Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Trippvirus; Paenibacillus virus Tripp.
p56298 no NCBI prot ID no annotation VI_00413 Bacilli_gi_423410568 Viruses.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_2 5795 terminase large subunit head and packaging 28 1.52E-39 29.94
phrog_38 1538 terminase large subunit head and packaging 13 5.67E-23 13.37
phrog_36 1547 transcriptional regulator transcription regulation 13 6.15E-23 13.33
phrog_248 477 transcriptional activator transcription regulation 9 2.38E-20 10.75
phrog_2198 68 Alt-like transcription activator transcription regulation 5 1.65E-16 6.9
phrog_8711 13 terminase large subunit head and packaging 3 9.84E-14 4.13

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_125 DNA invertase DNA, RNA and nucleotide metabolism 93.6 0.0078 12-45 / 151-184
phrog_1337 DNA binding protein DNA, RNA and nucleotide metabolism 90.1 0.062 8-43 / 8-43
phrog_1373 transcriptional regulator transcription regulation 90.9 0.044 17-42 / 42-67
phrog_1381 plasmid antitoxin with HTH domain moron, auxiliary metabolic gene and host takeover 91.5 0.034 15-42 / 19-46
phrog_14025 no annotation unknown function 94.7 0.0023 18-48 / 29-59
phrog_1482 terminase small subunit head and packaging 95.0 0.0014 12-107 / 23-123
phrog_14982 no annotation unknown function 91.1 0.04 18-48 / 28-59
phrog_151 transposase integration and excision 95.8 0.00026 9-43 / 13-47
phrog_1529 no annotation unknown function 95.1 0.0012 8-43 / 4-39
phrog_15534 HTH DNA binding protein DNA, RNA and nucleotide metabolism 92.3 0.022 18-48 / 38-70
phrog_1553 excisionase integration and excision 93.4 0.0095 20-41 / 5-26
phrog_1558 no annotation unknown function 92.5 0.019 6-42 / 104-140
phrog_1740 RNA polymerase sigma factor transcription regulation 92.5 0.019 3-42 / 126-165
phrog_1746 transcriptional repressor transcription regulation 91.8 0.029 13-43 / 16-46
phrog_17740 no annotation unknown function 91.8 0.029 18-55 / 15-51
phrog_1889 terminase small subunit head and packaging 95.9 0.00021 9-54 / 10-57
phrog_20467 HNH endonuclease DNA, RNA and nucleotide metabolism 93.8 0.0067 2-41 / 53-92
phrog_21036 no annotation unknown function 90.4 0.055 25-42 / 1-18
phrog_23081 no annotation unknown function 94.1 0.0047 13-50 / 9-44
phrog_2328 transcriptional repressor transcription regulation 93.1 0.012 16-42 / 25-51
phrog_24579 terminase small subunit head and packaging 98.9 5.6E-13 3-61 / 13-73
phrog_2606 terminase small subunit head and packaging 94.0 0.0053 6-54 / 7-57
phrog_26539 no annotation unknown function 95.3 0.00088 6-53 / 17-67
phrog_268 no annotation unknown function 92.7 0.016 12-52 / 9-51
phrog_2727 no annotation unknown function 91.3 0.037 7-43 / 13-49
phrog_28310 no annotation unknown function 92.9 0.015 5-43 / 9-47
phrog_2907 excisionase integration and excision 92.2 0.023 18-48 / 4-34
phrog_309 terminase small subunit head and packaging 97.7 7.4E-08 9-108 / 14-132
phrog_3218 terminase small subunit head and packaging 98.6 1.9E-11 2-106 / 17-126
phrog_323 endonuclease DNA, RNA and nucleotide metabolism 93.4 0.0094 3-43 / 49-88
phrog_3512 sigma factor transcription regulation 91.9 0.027 3-39 / 66-102
phrog_351 RNA polymerase sigma factor transcription regulation 93.4 0.0095 2-42 / 174-217
phrog_35 transcriptional repressor transcription regulation 90.6 0.05 21-42 / 15-36
phrog_3638 CII-like transcriptional activator transcription regulation 91.5 0.034 23-46 / 29-54
phrog_36 transcriptional regulator transcription regulation 92.5 0.019 5-41 / 91-127
phrog_3855 HTH DNA binding protein DNA, RNA and nucleotide metabolism 90.6 0.051 5-43 / 66-103
phrog_3 transcriptional repressor transcription regulation 95.4 0.00077 13-43 / 10-40
phrog_4044 terminase small subunit head and packaging 95.9 0.0002 5-56 / 17-68
phrog_409 transcriptional regulator transcription regulation 93.8 0.0066 22-41 / 13-32
phrog_4102 terminase small subunit head and packaging 96.6 2.1E-05 6-93 / 14-102
phrog_4151 DNA binding protein DNA, RNA and nucleotide metabolism 96.9 6E-06 11-48 / 13-49
phrog_4441 HTH DNA binding protein DNA, RNA and nucleotide metabolism 91.3 0.036 9-44 / 3-43
phrog_4494 no annotation unknown function 95.2 0.00097 9-53 / 8-51
phrog_4646 transposase integration and excision 94.0 0.0055 4-42 / 7-45
phrog_4745 DNA binding protein DNA, RNA and nucleotide metabolism 92.0 0.026 21-45 / 6-30
phrog_4779 transcriptional regulator transcription regulation 94.3 0.0038 13-43 / 8-38
phrog_4869 no annotation unknown function 90.5 0.054 20-56 / 11-57
phrog_509 terminase small subunit head and packaging 94.1 0.0051 18-51 / 14-47
phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism 94.7 0.0024 2-39 / 62-99
phrog_5301 transcriptional repressor transcription regulation 95.1 0.0013 17-45 / 21-49
phrog_534 DNA binding protein DNA, RNA and nucleotide metabolism 95.4 0.00074 18-52 / 24-59
phrog_5751 terminase large subunit head and packaging 95.1 0.0013 18-46 / 17-45
phrog_57 terminase small subunit head and packaging 92.2 0.022 20-46 / 3-29
phrog_606 terminase small subunit head and packaging 94.5 0.0031 18-107 / 65-138
phrog_609 RIIB lysis inhibitor lysis 93.4 0.0099 3-45 / 6-49
phrog_6223 transcriptional repressor transcription regulation 91.6 0.032 18-42 / 16-40
phrog_638 transcriptional regulator transcription regulation 94.4 0.0033 8-96 / 3-91
phrog_6425 no annotation unknown function 90.1 0.062 10-42 / 54-86
phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 93.3 0.01 4-43 / 4-43
phrog_66 excisionase and transcriptional regulator integration and excision 96.3 7.5E-05 18-45 / 8-35
phrog_6831 transcriptional regulator transcription regulation 95.3 0.00085 9-40 / 5-36
phrog_6962 no annotation unknown function 90.6 0.05 18-43 / 13-38
phrog_7061 HTH DNA binding protein DNA, RNA and nucleotide metabolism 93.4 0.0093 18-42 / 43-67
phrog_7067 terminase small subunit head and packaging 90.7 0.049 15-41 / 27-53
phrog_7126 HTH DNA binding protein DNA, RNA and nucleotide metabolism 95.0 0.0015 13-52 / 24-62
phrog_725 CII-like regulator transcription regulation 95.7 0.00041 13-43 / 19-51
phrog_7344 terminase small subunit head and packaging 99.8 6E-23 1-107 / 8-114
phrog_7545 HNH endonuclease DNA, RNA and nucleotide metabolism 96.0 0.00016 11-43 / 10-42
phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 94.9 0.0016 13-108 / 13-107
phrog_7676 no annotation unknown function 94.1 0.0048 9-42 / 6-39
phrog_7950 transcriptional repressor transcription regulation 95.8 0.00027 4-45 / 9-48
phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 91.1 0.04 21-46 / 20-44
phrog_8446 HNH endonuclease DNA, RNA and nucleotide metabolism 94.9 0.0018 13-46 / 11-44
phrog_8794 sigma factor transcription regulation 92.5 0.018 7-42 / 9-44
phrog_8 transcriptional regulator transcription regulation 95.0 0.0015 16-42 / 11-36
phrog_9759 DNA binding protein DNA, RNA and nucleotide metabolism 96.3 7.6E-05 19-43 / 18-42

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF00292.17 'Paired box' domain 1.2E-09 25-67 / 16-58
PF08822.10 Protein of unknown function (DUF1804) 5.5E-09 26-67 / 2-44
PF04552.12 Sigma-54, DNA binding domain 5.3E-08 25-66 / 29-72
PF04936.11 Protein of unknown function (DUF658) 4.2E-06 42-66 / 14-38
PF07141.10 Putative bacteriophage terminase small subunit 4.8E-06 30-66 / 19-55
PF01710.15 Transposase 5.5E-06 26-67 / 2-43
PF12759.6 InsA C-terminal domain 5.6E-06 27-66 / 6-45
PF09607.9 Brinker DNA-binding domain 8.4E-06 26-67 / 5-50
PF07750.10 GcrA cell cycle regulator 9.2E-06 27-66 / 3-43
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 2E-05 33-66 / 4-37
PF05344.10 Domain of Unknown Function (DUF746) 3.9E-05 37-66 / 7-36
PF10668.8 Phage terminase small subunit 4.1E-05 25-67 / 3-47
PF13011.5 leucine-zipper of insertion element IS481 4.5E-05 27-67 / 8-49
PF13542.5 Helix-turn-helix domain of transposase family ISL3 5.9E-05 28-66 / 13-50
PF02796.14 Helix-turn-helix domain of resolvase 7.6E-05 33-65 / 12-44
PF10654.8 Protein of unknown function (DUF2481) 9.8E-05 32-66 / 70-104
PF13936.5 Helix-turn-helix domain 0.0001 29-65 / 7-43
PF06322.10 Phage NinH protein 0.00013 40-66 / 14-40
PF03333.12 Adhesin biosynthesis transcription regulatory protein 0.00014 27-66 / 40-79
PF16677.4 DNA-packaging protein gp3 0.00015 27-66 / 6-53
PF06627.10 Protein of unknown function (DUF1153) 0.00016 25-67 / 28-71
PF13565.5 Homeodomain-like domain 0.00016 134-145 / 74-85
PF16087.4 Domain of unknown function (DUF4817) 0.00017 31-67 / 4-49
PF07037.10 Putative transcription regulator (DUF1323) 0.00017 43-65 / 1-23
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.0002 40-66 / 17-43
PF01527.19 Transposase 0.00021 27-67 / 5-46
PF04218.12 CENP-B N-terminal DNA-binding domain 0.00022 31-66 / 11-47
PF11427.7 Tc3 transposase 0.00027 31-66 / 9-44
PF13518.5 Helix-turn-helix domain 0.00028 35-67 / 5-36
PF13309.5 HTH domain 0.00029 29-64 / 22-63
PF14493.5 Helix-turn-helix domain 0.00029 36-67 / 6-37
PF07638.10 ECF sigma factor 0.00032 26-66 / 133-173
PF05331.10 Protein of unknown function (DUF742) 0.00037 26-66 / 38-77
PF13384.5 Homeodomain-like domain 0.0005 33-66 / 8-41
PF08765.10 Mor transcription activator family 0.0005 35-66 / 66-96
PF08281.11 Sigma-70, region 4 0.00057 28-66 / 12-50
PF12824.6 Mitochondrial ribosomal protein subunit L20 0.00057 25-66 / 87-131
PF16509.4 TrfB plasmid transcriptional repressor 0.00066 31-66 / 20-55
PF02954.18 Bacterial regulatory protein, Fis family 0.00075 41-65 / 15-39
PF04545.15 Sigma-70, region 4 0.00075 27-66 / 5-48
PF13412.5 Winged helix-turn-helix DNA-binding 0.00085 41-66 / 16-41
PF17443.1 Uncharacterized protein pXO2-72 0.00087 41-66 / 7-32
PF13411.5 MerR HTH family regulatory protein 0.00093 44-67 / 2-25
PF05225.15 helix-turn-helix, Psq domain 0.001 40-66 / 14-41
PF13551.5 Winged helix-turn helix 0.0012 39-67 / 8-36
PF15978.4 Tn7-like transposition protein D 0.0013 26-66 / 186-227
PF01371.18 Trp repressor protein 0.0013 36-66 / 42-72
PF01381.21 Helix-turn-helix 0.0014 40-66 / 7-33
PF13404.5 AsnC-type helix-turn-helix domain 0.0016 41-66 / 16-41
PF12116.7 Stage III sporulation protein D 0.0016 41-66 / 18-43
PF07374.10 Protein of unknown function (DUF1492) 0.0017 24-66 / 52-95
PF06806.11 Putative excisionase (DUF1233) 0.0022 43-64 / 10-31
PF04297.13 Putative helix-turn-helix protein, YlxM / p13 like 0.0022 27-66 / 18-57
PF11112.7 Pyocin activator protein PrtN 0.0022 41-66 / 12-38
PF00376.22 MerR family regulatory protein 0.0023 45-66 / 2-23
PF13556.5 PucR C-terminal helix-turn-helix domain 0.0025 40-67 / 10-37
PF02001.15 Protein of unknown function DUF134 0.0026 25-66 / 30-71
PF13022.5 Helix-turn-helix of insertion element transposase 0.0026 42-65 / 25-48
PF08535.9 KorB domain 0.0027 41-67 / 2-28
PF00356.20 Bacterial regulatory proteins, lacI family 0.0027 44-66 / 1-23
PF11242.7 Protein of unknown function (DUF2774) 0.0032 37-66 / 9-38
PF07453.12 NUMOD1 domain 0.0033 42-63 / 19-40
PF10975.7 Protein of unknown function (DUF2802) 0.0036 30-63 / 31-64
PF06530.11 Phage antitermination protein Q 0.0036 28-66 / 65-103
PF13591.5 MerR HTH family regulatory protein 0.0036 43-66 / 1-24
PF07278.10 Protein of unknown function (DUF1441) 0.0038 42-66 / 1-25
PF05930.11 Prophage CP4-57 regulatory protein (AlpA) 0.004 42-64 / 3-25
PF07825.10 Excisionase-like protein 0.0047 43-66 / 3-28
PF09862.8 Protein of unknown function (DUF2089) 0.0049 26-66 / 33-73
PF06413.10 Neugrin 0.0049 25-65 / 9-52
PF16264.4 SatD family (SatD) 0.0051 25-66 / 149-195
PF02042.14 RWP-RK domain 0.0051 40-66 / 10-36
PF04967.11 HTH DNA binding domain 0.0053 43-66 / 24-47
PF13413.5 Helix-turn-helix domain 0.0053 40-65 / 7-32
PF10743.8 Regulatory phage protein cox 0.0058 41-66 / 10-35
PF09035.9 Excisionase from transposon Tn916 0.0063 41-65 / 14-38
PF00126.26 Bacterial regulatory helix-turn-helix protein, lysR family 0.0066 41-66 / 10-35
PF12802.6 MarR family 0.0082 43-67 / 22-46

Annotations of the NCBI proteins of this PHROG


13:hypothetical protein 5:terminase small subunit 4:protein of an unannotated phage 2:small terminase 1:terminase smal subunit 1:DNA binding domain protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0043565 sequence-specific DNA binding
GO:0004803 transposase activity
GO:0006310 DNA recombination
GO:0003677 DNA binding
GO:0003700 DNA binding transcription factor activity
GO:0005524 ATP binding
GO:0006313 transposition, DNA-mediated
GO:0000150 recombinase activity
GO:0016987 sigma factor activity
GO:0019069 viral capsid assembly
GO:0060567 negative regulation of DNA-templated transcription, termination
GO:0006352 DNA-templated transcription, initiation
GO:0005622 intracellular
GO:0006355 regulation of transcription, DNA-templated

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