phrog_25897 is made of 3 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
102 102 102


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p377276 no NCBI prot ID no annotation VI_05350 Bacilli_gi_550697070 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Lactobacillus phage Sha1.
p162878 no NCBI prot ID no annotation VI_00964 Bacilli_gi_254555169_1024403_1064133 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_019489_p2 YP_007003542.1 hypothetical protein NC_019489 Lactobacillus phage Sha1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_50 1303 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 3 6.54E-11 1.31
phrog_32922 2 no annotation unknown function 1 3.70E-11 1.55

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_11108 no annotation unknown function 96.6 2.4E-05 8-86 / 6-80
phrog_20941 no annotation unknown function 93.1 0.012 1-98 / 1-101

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF05331.10 Protein of unknown function (DUF742) 4.6E-06 48-96 / 37-84
PF07638.10 ECF sigma factor 1.6E-05 47-91 / 131-175
PF03333.12 Adhesin biosynthesis transcription regulatory protein 8.2E-05 47-92 / 37-82
PF04545.15 Sigma-70, region 4 0.00012 48-90 / 3-49
PF06530.11 Phage antitermination protein Q 0.00022 47-91 / 60-105
PF07374.10 Protein of unknown function (DUF1492) 0.00027 47-90 / 52-96
PF08281.11 Sigma-70, region 4 0.00028 47-90 / 8-51
PF07750.10 GcrA cell cycle regulator 0.00035 50-92 / 3-46
PF12759.6 InsA C-terminal domain 0.00044 62-89 / 18-45
PF13412.5 Winged helix-turn-helix DNA-binding 0.00045 64-94 / 16-46
PF04492.12 Bacteriophage replication protein O 0.00049 49-97 / 24-81
PF16509.4 TrfB plasmid transcriptional repressor 0.00051 47-91 / 13-57
PF16264.4 SatD family (SatD) 0.00053 47-92 / 148-198
PF02319.19 E2F/DP family winged-helix DNA-binding domain 0.00056 64-98 / 22-56
PF11427.7 Tc3 transposase 0.00057 62-93 / 17-48
PF04297.13 Putative helix-turn-helix protein, YlxM / p13 like 0.00065 47-90 / 15-58
PF08822.10 Protein of unknown function (DUF1804) 0.00076 52-94 / 5-48
PF05584.10 Sulfolobus plasmid regulatory protein 0.00077 50-97 / 4-50
PF12802.6 MarR family 0.0008 66-96 / 22-52
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.00088 51-92 / 4-46
PF02001.15 Protein of unknown function DUF134 0.00093 47-90 / 29-72
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 0.001 64-95 / 12-43
PF00292.17 'Paired box' domain 0.0011 49-93 / 17-61
PF10007.8 Uncharacterized protein conserved in archaea (DUF2250) 0.0011 50-98 / 6-55
PF08221.10 RNA polymerase III subunit RPC82 helix-turn-helix domain 0.0011 50-97 / 11-59
PF07381.10 Winged helix DNA-binding domain (DUF1495) 0.0014 51-97 / 8-66
PF01418.16 Helix-turn-helix domain, rpiR family 0.0014 48-96 / 12-65
PF05344.10 Domain of Unknown Function (DUF746) 0.0014 59-93 / 6-40
PF13936.5 Helix-turn-helix domain 0.0015 62-88 / 17-43
PF06322.10 Phage NinH protein 0.0018 63-93 / 14-44
PF11242.7 Protein of unknown function (DUF2774) 0.0021 55-94 / 5-43
PF03965.15 Penicillinase repressor 0.0021 52-98 / 3-56
PF09824.8 ArsR transcriptional regulator 0.0023 52-98 / 17-61
PF05225.15 helix-turn-helix, Psq domain 0.0023 58-90 / 9-42
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0024 66-90 / 24-48
PF04967.11 HTH DNA binding domain 0.0024 66-91 / 24-49
PF02796.14 Helix-turn-helix domain of resolvase 0.0025 63-88 / 19-44
PF09202.10 Rio2, N-terminal 0.0026 50-97 / 4-56
PF16221.4 winged helix-turn-helix 0.0027 65-96 / 46-77
PF13011.5 leucine-zipper of insertion element IS481 0.0026 57-94 / 16-53
PF01022.19 Bacterial regulatory protein, arsR family 0.0026 65-94 / 16-45
PF08535.9 KorB domain 0.0027 65-95 / 3-33
PF01710.15 Transposase 0.0031 62-91 / 15-44
PF09114.9 Transcription factor MotA, activation domain 0.0033 49-97 / 13-63
PF08222.10 CodY helix-turn-helix domain 0.0032 66-96 / 5-35
PF04182.11 B-block binding subunit of TFIIIC 0.0035 65-97 / 18-50
PF00196.18 Bacterial regulatory proteins, luxR family 0.0036 51-92 / 4-44
PF04936.11 Protein of unknown function (DUF658) 0.0037 65-91 / 14-40
PF13404.5 AsnC-type helix-turn-helix domain 0.0036 64-89 / 16-41
PF01371.18 Trp repressor protein 0.0037 57-92 / 41-75
PF08784.10 Replication protein A C terminal 0.0038 64-99 / 57-95
PF07141.10 Putative bacteriophage terminase small subunit 0.0041 61-91 / 27-57
PF09012.9 FeoC like transcriptional regulator 0.0041 65-98 / 14-47
PF12793.6 Sugar transport-related sRNA regulator N-term 0.0042 63-97 / 16-50
PF13463.5 Winged helix DNA-binding domain 0.0042 65-96 / 17-48
PF09607.9 Brinker DNA-binding domain 0.0047 66-93 / 26-53
PF01978.18 Sugar-specific transcriptional regulator TrmB 0.005 51-97 / 7-54
PF13518.5 Helix-turn-helix domain 0.005 64-95 / 10-41
PF04552.12 Sigma-54, DNA binding domain 0.0054 48-90 / 29-73
PF10654.8 Protein of unknown function (DUF2481) 0.0059 63-89 / 78-104
PF14493.5 Helix-turn-helix domain 0.0057 63-94 / 10-41
PF00126.26 Bacterial regulatory helix-turn-helix protein, lysR family 0.0057 66-92 / 12-38
PF11313.7 Protein of unknown function (DUF3116) 0.0059 66-98 / 21-60
PF05158.11 RNA polymerase Rpc34 subunit 0.0065 49-98 / 89-141
PF10668.8 Phage terminase small subunit 0.0064 65-94 / 22-51
PF13542.5 Helix-turn-helix domain of transposase family ISL3 0.0063 63-89 / 25-50
PF13556.5 PucR C-terminal helix-turn-helix domain 0.0067 63-93 / 10-40
PF01475.18 Ferric uptake regulator family 0.0073 50-98 / 5-60
PF14277.5 Domain of unknown function (DUF4364) 0.0073 64-98 / 14-52
PF08280.10 M protein trans-acting positive regulator (MGA) HTH domain 0.0075 64-91 / 19-46
PF14394.5 Domain of unknown function (DUF4423) 0.0076 54-98 / 23-71
PF02954.18 Bacterial regulatory protein, Fis family 0.0076 64-88 / 15-39
PF00325.19 Bacterial regulatory proteins, crp family 0.0076 66-94 / 3-31

Annotations of the NCBI proteins of this PHROG


1:hypothetical protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0043565 sequence-specific DNA binding
GO:0005666 DNA-directed RNA polymerase III complex
GO:0005524 ATP binding
GO:0019069 viral capsid assembly
GO:0060567 negative regulation of DNA-templated transcription, termination
GO:0006355 regulation of transcription, DNA-templated
GO:0006352 DNA-templated transcription, initiation
GO:0006468 protein phosphorylation
GO:0003677 DNA binding
GO:0006310 DNA recombination
GO:0000150 recombinase activity
GO:0003700 DNA binding transcription factor activity
GO:0005667 transcription factor complex
GO:0045892 negative regulation of transcription, DNA-templated
GO:0016987 sigma factor activity
GO:0006383 transcription by RNA polymerase III
GO:0006260 DNA replication
GO:0005622 intracellular
GO:0004674 protein serine/threonine kinase activity

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