Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
129.67 | 143 | 125 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
NC_020998_p47 | YP_007761636.1 | hypothetical protein | NC_020998 | Haloarcula hispanica virus PH1 | Viruses; Varidnaviria; Helvetiavirae; Dividoviricota; Laserviricetes; Halopanivirales; Sphaerolipoviridae; Alphasphaerolipovirus. |
NC_016989_p39 | YP_005352825.1 | putative protein 39 | NC_016989 | Haloarcula hispanica icosahedral virus 2 | Viruses; Varidnaviria; Helvetiavirae; Dividoviricota; Laserviricetes; Halopanivirales; Sphaerolipoviridae; Alphasphaerolipovirus. |
NC_007217_p51 | YP_271908.1 | ORF 51 | NC_007217 | Haloarcula hispanica virus SH1 | Viruses; Varidnaviria; Helvetiavirae; Dividoviricota; Laserviricetes; Halopanivirales; Sphaerolipoviridae; Alphasphaerolipovirus. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_2095 | 72 | no annotation | unknown function | 2 | 9.82E-12 | 2.13 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_1190 | RNA polymerase sigma factor | transcription regulation | 94.4 | 0.0035 | 46-110 / 118-183 |
phrog_1740 | RNA polymerase sigma factor | transcription regulation | 93.3 | 0.011 | 63-112 / 125-174 |
phrog_3512 | sigma factor | transcription regulation | 94.1 | 0.005 | 55-111 / 57-113 |
phrog_6362 | no annotation | unknown function | 90.8 | 0.046 | 63-110 / 15-62 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF07638.10 | ECF sigma factor | 6E-06 | 79-129 / 130-180 |
PF07374.10 | Protein of unknown function (DUF1492) | 9.7E-05 | 73-126 / 47-99 |
PF03333.12 | Adhesin biosynthesis transcription regulatory protein | 0.00011 | 79-130 / 36-87 |
PF05331.10 | Protein of unknown function (DUF742) | 0.00016 | 81-126 / 37-81 |
PF06530.11 | Phage antitermination protein Q | 0.00019 | 79-132 / 59-113 |
PF05263.10 | Protein of unknown function (DUF722) | 0.00034 | 71-127 / 72-133 |
PF04545.15 | Sigma-70, region 4 | 0.00035 | 82-126 / 4-52 |
PF04297.13 | Putative helix-turn-helix protein, YlxM / p13 like | 0.00079 | 79-131 / 14-66 |
PF16264.4 | SatD family (SatD) | 0.0011 | 79-131 / 147-204 |
PF02001.15 | Protein of unknown function DUF134 | 0.0016 | 79-131 / 28-80 |
PF08281.11 | Sigma-70, region 4 | 0.0017 | 79-123 / 7-51 |
PF16509.4 | TrfB plasmid transcriptional repressor | 0.0022 | 79-128 / 12-61 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
no KEGG group similar to this PHROG |
ID | Definition |
---|---|
GO:0003677 | DNA binding |
GO:0060567 | negative regulation of DNA-templated transcription, termination |
GO:0016987 | sigma factor activity |
GO:0006355 | regulation of transcription, DNA-templated |
GO:0003700 | DNA binding transcription factor activity |
GO:0006352 | DNA-templated transcription, initiation |