Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
172 | 274 | 122 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
p299992 | no NCBI prot ID | no annotation | VI_08034 | Gammaproteobacteria_gi_419248270 | Viruses. |
p122287 | no NCBI prot ID | no annotation | VI_07163 | Gammaproteobacteria_gi_417230772_0_43149 | Viruses. |
NC_011142_p4 | YP_002128438.1 | gp04 putative replication protein | NC_011142 | Iodobacteriophage phiPLPE | Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Iodovirus; Iodobacter virus PLPE. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_4617 | 29 | replication initiation protein | DNA, RNA and nucleotide metabolism | 2 | 6.01E-13 | 3.34 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_10293 | no annotation | unknown function | 95.1 | 0.0011 | 4-61 / 7-61 |
phrog_16167 | replication initiation protein | DNA, RNA and nucleotide metabolism | 95.2 | 0.00097 | 4-80 / 179-255 |
phrog_16304 | no annotation | unknown function | 97.3 | 9E-07 | 8-79 / 132-199 |
phrog_1701 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 99.9 | 7E-27 | 8-96 / 252-340 |
phrog_18526 | no annotation | unknown function | 99.9 | 1.5E-26 | 9-94 / 48-133 |
phrog_22793 | no annotation | unknown function | 94.2 | 0.0044 | 28-122 / 76-177 |
phrog_23060 | no annotation | unknown function | 99.9 | 5.6E-33 | 50-113 / 1-76 |
phrog_270 | replication initiation protein | DNA, RNA and nucleotide metabolism | 99.8 | 1.7E-24 | 5-102 / 142-239 |
phrog_3729 | replication initiation protein | DNA, RNA and nucleotide metabolism | 99.7 | 1.5E-22 | 9-94 / 247-332 |
phrog_9327 | primosomal protein | DNA, RNA and nucleotide metabolism | 98.5 | 8E-11 | 5-85 / 157-231 |
phrog_9474 | replication initiation protein | DNA, RNA and nucleotide metabolism | 96.4 | 5.6E-05 | 7-80 / 172-241 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF06926.10 | Putative replisome organiser protein C-terminus | 1E-07 | 143-222 / 4-83 |
PF06970.10 | Replication initiator protein A (RepA) N-terminus | 2.3E-07 | 20-85 / 1-75 |
PF09681.9 | N-terminal phage replisome organiser (Phage_rep_org_N) | 9E-06 | 21-94 / 1-86 |
PF04492.12 | Bacteriophage replication protein O | 0.00014 | 15-95 / 3-83 |
PF14297.5 | Domain of unknown function (DUF4373) | 0.00026 | 21-94 / 1-81 |
PF07120.10 | Protein of unknown function (DUF1376) | 0.00031 | 40-91 / 17-68 |
PF02319.19 | E2F/DP family winged-helix DNA-binding domain | 0.0067 | 61-94 / 23-56 |
PF16221.4 | winged helix-turn-helix | 0.0085 | 62-92 / 47-77 |
PF01726.15 | LexA DNA binding domain | 0.009 | 61-95 / 25-60 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
no KEGG group similar to this PHROG |
ID | Definition |
---|---|
GO:0003700 | DNA binding transcription factor activity |
GO:0006260 | DNA replication |
GO:0006355 | regulation of transcription, DNA-templated |
GO:0006508 | proteolysis |
GO:0005667 | transcription factor complex |
GO:0004252 | serine-type endopeptidase activity |