phrog_2655 is made of 54 protein sequences and is annotated as "excisionase"
Functional category: integration and excision


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
75.41 333 68


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p346156 no NCBI prot ID no annotation VI_04054 unknown_gi_547812173 Viruses.
p54080 no NCBI prot ID no annotation VI_01167 Clostridia_gi_313116237 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p193343 no NCBI prot ID no annotation VI_00879 Bacilli_gi_507027716 Viruses.
p260952 no NCBI prot ID no annotation VI_04426 Bacilli_gi_177654952_9433_40354 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_028951_p28 YP_009213101.1 hypothetical protein NC_028951 Clostridium phage phiCD481-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p280270 no NCBI prot ID no annotation VI_06091 Clostridia_gi_545037117 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_029001_p26 YP_009217661.1 hypothetical protein NC_029001 Clostridium phage phiCDHM11 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p378905 no NCBI prot ID no annotation VI_05840 Clostridia_gi_544956385 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
LK985321_p26 CDU85313.1 conserved hypothetical protein LK985321 Clostridium phage phiCDHM14 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
p377831 no NCBI prot ID no annotation VI_05836 Clostridia_gi_544956067 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Clostridium phage phiCD6356.
p215261 no NCBI prot ID no annotation VI_06052 Clostridia_gi_545023332 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Clostridium phage phiCD6356.
p320972 no NCBI prot ID no annotation VI_06037 Clostridia_gi_545020459 Viruses.
p275141 no NCBI prot ID no annotation VI_05813 Clostridia_gi_544690375 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p343195 no NCBI prot ID no annotation VI_05962 Clostridia_gi_544997337_10177_31046 Viruses.
p394024 no NCBI prot ID no annotation VI_05848 Clostridia_gi_544961859 Viruses.
p414592 no NCBI prot ID no annotation VI_06063 Clostridia_gi_545030500 Viruses.
p367791 no NCBI prot ID no annotation VI_06034 Clostridia_gi_545020309 Viruses.
p189807 no NCBI prot ID no annotation VI_06060 Clostridia_gi_545026636_0_37230 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p245014 no NCBI prot ID no annotation VI_05976 Clostridia_gi_545000730_12518_44765 Viruses.
p372353 no NCBI prot ID no annotation VI_05950 Clostridia_gi_544994757 Viruses.
p417391 no NCBI prot ID no annotation VI_06080 Clostridia_gi_545034157 Viruses.
p322819 no NCBI prot ID no annotation VI_05849 Clostridia_gi_544963344_8075_31204 Viruses.
p258676 no NCBI prot ID no annotation VI_06132 Clostridia_gi_545047080_76197_107291 Viruses.
p363272 no NCBI prot ID no annotation VI_05842 Clostridia_gi_544957317 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p358885 no NCBI prot ID no annotation VI_05925 Clostridia_gi_544988586 Viruses.
NC_028883_p76 YP_009206194.1 hypothetical protein NC_028883 Clostridium phage phiMMP01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Lubbockvirus; unclassified Lubbockvirus.
p407058 no NCBI prot ID no annotation VI_06179 Clostridia_gi_545061697 Viruses.
p435152 no NCBI prot ID no annotation VI_06193 Clostridia_gi_550114834 Viruses.
p168292 no NCBI prot ID no annotation VI_06182 Clostridia_gi_545062049_522710_561922 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Lubbockvirus; Clostridium virus phiC2.
p175938 no NCBI prot ID no annotation VI_05890 Clostridia_gi_544975200_8040_46525 Viruses.
p316811 no NCBI prot ID no annotation VI_06048 Clostridia_gi_545022922_47477_71257 Viruses.
p391909 no NCBI prot ID no annotation VI_06035 Clostridia_gi_545020338_7753_22812 Viruses.
LN681534_p63 CEK40274.1 conserved protein of unknown function LN681534 Clostridium phage phiCD24-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p80558 no NCBI prot ID no annotation VI_06002 Clostridia_gi_545013623_10105_57898 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p372494 no NCBI prot ID no annotation VI_06181 Clostridia_gi_545061917 Viruses.
p350826 no NCBI prot ID no annotation VI_06027 Clostridia_gi_545019489_10107_29800 Viruses.
p260046 no NCBI prot ID no annotation VI_05900 Clostridia_gi_544978902 Viruses.
p252174 no NCBI prot ID no annotation VI_06129 Clostridia_gi_545044940 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p432184 no NCBI prot ID no annotation VI_04489 Bacilli_gi_293380154 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae; Lactobacillus phage phiAQ113.
p108094 no NCBI prot ID no annotation VI_04503 Bacilli_gi_485035020 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Lactobacillus prophage Lj965.
p76878 no NCBI prot ID no annotation VI_04504 Bacilli_gi_485035154 Viruses.
p71920 no NCBI prot ID no annotation VI_05747 Clostridia_gi_153883184 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Clostridium phage c-st.
p68576 no NCBI prot ID no annotation VI_05782 Clostridia_gi_485045024 Viruses.
p385845 no NCBI prot ID no annotation VI_05788 Clostridia_gi_485045145 Viruses.
NC_008265_p46 YP_699975.1 hypothetical protein NC_008265 Clostridium phage phiSM101 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p163509 no NCBI prot ID no annotation VI_01299 Clostridia_gi_331270707 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p85613 no NCBI prot ID no annotation VI_04017 Negativicutes_gi_546350179 Viruses.
p166214 no NCBI prot ID no annotation VI_12298 Negativicutes_gi_303229258 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p222623 no NCBI prot ID no annotation VI_04162 Actinobacteria_gi_545611432 Viruses.
p148310 no NCBI prot ID no annotation VI_01200 Clostridia_gi_365137247_96890_137931 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p305900 no NCBI prot ID no annotation VI_05797 Clostridia_gi_402838105 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p305315 no NCBI prot ID no annotation VI_05828 Clostridia_gi_510836939 Viruses.
p146832 no NCBI prot ID no annotation VI_00894 Bacilli_gi_336233546_739015_780180 Viruses.
NC_009552_p67 YP_001285865.1 putative regulatory protein NC_009552 Geobacillus virus E2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_36 1547 transcriptional regulator transcription regulation 23 4.15E-46 36.5
phrog_6078 20 no annotation unknown function 20 0 1000
phrog_30829 2 no annotation unknown function 2 0 1000
phrog_31530 2 no annotation unknown function 2 0 1000
phrog_33472 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_10045 HTH DNA binding protein DNA, RNA and nucleotide metabolism 97.7 5.1E-08 3-53 / 16-63
phrog_11671 no annotation unknown function 91.5 0.034 5-47 / 5-46
phrog_151 transposase integration and excision 90.3 0.057 6-30 / 22-46
phrog_15534 HTH DNA binding protein DNA, RNA and nucleotide metabolism 92.7 0.016 5-30 / 37-62
phrog_1553 excisionase integration and excision 91.9 0.027 5-27 / 2-24
phrog_1840 excisionase integration and excision 96.3 7.7E-05 4-59 / 3-56
phrog_1969 no annotation unknown function 92.5 0.019 3-31 / 50-78
phrog_19913 no annotation unknown function 97.2 1.5E-06 4-57 / 67-116
phrog_2440 transcriptional regulator transcription regulation 90.7 0.048 6-61 / 23-79
phrog_2474 MerR-like transcriptional regulator transcription regulation 94.6 0.0026 4-35 / 12-43
phrog_27252 no annotation unknown function 98.7 1.4E-11 2-60 / 85-143
phrog_2907 excisionase integration and excision 96.0 0.00016 5-55 / 3-54
phrog_3037 transcriptional repressor transcription regulation 90.0 0.064 9-51 / 29-77
phrog_32138 DNA binding protein DNA, RNA and nucleotide metabolism 93.5 0.0087 8-40 / 19-47
phrog_3282 sigma factor transcription regulation 93.3 0.011 8-30 / 33-55
phrog_3470 no annotation unknown function 95.8 0.00026 4-30 / 3-29
phrog_38299 no annotation unknown function 96.9 5.4E-06 2-58 / 1-56
phrog_3855 HTH DNA binding protein DNA, RNA and nucleotide metabolism 91.5 0.034 8-34 / 80-109
phrog_4151 DNA binding protein DNA, RNA and nucleotide metabolism 91.6 0.032 5-30 / 19-43
phrog_4691 excisionase integration and excision 95.1 0.0013 4-48 / 15-56
phrog_575 Cox-like excisionase and repressor integration and excision 94.2 0.0044 6-47 / 12-55
phrog_57 terminase small subunit head and packaging 93.7 0.0072 7-34 / 2-29
phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism 93.5 0.0089 3-41 / 10-44
phrog_6058 no annotation unknown function 94.6 0.0028 5-59 / 3-60
phrog_629 excisionase integration and excision 93.9 0.006 7-54 / 4-53
phrog_6401 DNA binding protein DNA, RNA and nucleotide metabolism 97.8 3.2E-08 3-55 / 5-54
phrog_6620 transposase integration and excision 94.3 0.0039 5-59 / 1-53
phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism 92.6 0.018 2-30 / 31-59
phrog_66 excisionase and transcriptional regulator integration and excision 96.8 9.6E-06 3-59 / 5-58
phrog_7338 no annotation unknown function 90.7 0.048 5-57 / 28-76
phrog_7506 recombination directionality factor integration and excision 94.9 0.0016 7-60 / 14-62
phrog_7735 excisionase integration and excision 92.6 0.018 5-30 / 15-40
phrog_9759 DNA binding protein DNA, RNA and nucleotide metabolism 95.6 0.0005 8-36 / 19-47

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF11112.7 Pyocin activator protein PrtN 2.2E-05 159-214 / 11-69
PF13591.5 MerR HTH family regulatory protein 2.3E-05 162-216 / 1-51
PF12964.6 Protein of unknown function (DUF3853) 6.1E-05 158-212 / 42-94
PF08876.10 Domain of unknown function (DUF1836) 6.9E-05 160-219 / 9-71
PF06806.11 Putative excisionase (DUF1233) 9.3E-05 158-213 / 6-68
PF05930.11 Prophage CP4-57 regulatory protein (AlpA) 0.00013 160-210 / 2-51
PF09035.9 Excisionase from transposon Tn916 0.00014 158-213 / 12-65
PF07825.10 Excisionase-like protein 0.00025 161-207 / 2-48
PF13411.5 MerR HTH family regulatory protein 0.00027 162-216 / 1-53
PF10743.8 Regulatory phage protein cox 0.00045 158-214 / 8-66
PF04636.12 PA26 p53-induced protein (sestrin) 0.00066 51-115 / 108-177
PF17443.1 Uncharacterized protein pXO2-72 0.00081 158-184 / 5-31
PF12728.6 Helix-turn-helix domain 0.00092 162-211 / 2-48
PF07618.10 Protein of unknown function (DUF1580) 0.001 162-213 / 3-55
PF00376.22 MerR family regulatory protein 0.0017 163-189 / 1-26
PF16701.4 Adenylate cyclase regulatory domain 0.0021 160-218 / 57-111
PF07471.11 Phage DNA packaging protein Nu1 0.0034 161-215 / 2-57
PF07278.10 Protein of unknown function (DUF1441) 0.0053 162-213 / 2-49

Annotations of the NCBI proteins of this PHROG


6:hypothetical protein 1:regulatory protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006355 regulation of transcription, DNA-templated
GO:0005634 nucleus
GO:1901031 regulation of response to reactive oxygen species
GO:0003677 DNA binding
GO:0006310 DNA recombination

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