phrog_27888 is made of 3 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
78.33 79 79


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p63106 no NCBI prot ID no annotation VI_07617 Gammaproteobacteria_gi_418801035 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p48162 no NCBI prot ID no annotation VI_06444 Gammaproteobacteria_gi_156105548 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.
p76461 no NCBI prot ID no annotation VI_10015 Gammaproteobacteria_gi_555241679_2751_51056 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Punavirus; Escherichia virus P1.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_19219 4 no annotation unknown function 3 5.49E-22 12.38
phrog_872 165 no annotation unknown function 3 1.63E-14 4.91

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
no PHROGs similar                                                                           

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF10007.8 Uncharacterized protein conserved in archaea (DUF2250) 3.9E-12 3-78 / 6-92
PF11313.7 Protein of unknown function (DUF3116) 5.3E-12 8-78 / 10-81
PF04079.15 Segregation and condensation complex subunit ScpB 1E-11 2-77 / 80-150
PF14557.5 Putative AphA-like transcriptional regulator 1.3E-11 2-77 / 5-88
PF09857.8 Putative toxin of bacterial toxin-antitoxin pair 3.7E-11 1-78 / 1-79
PF07381.10 Winged helix DNA-binding domain (DUF1495) 6E-11 3-76 / 7-88
PF09114.9 Transcription factor MotA, activation domain 7.4E-11 2-77 / 13-79
PF03965.15 Penicillinase repressor 8.8E-11 3-73 / 1-71
PF02334.15 Replication terminator protein 8.7E-11 7-77 / 20-101
PF05584.10 Sulfolobus plasmid regulatory protein 1.1E-10 2-75 / 3-71
PF14277.5 Domain of unknown function (DUF4364) 1.4E-10 7-77 / 2-71
PF03551.13 Transcriptional regulator PadR-like family 5.1E-10 20-77 / 13-73
PF10711.8 Hypothetical protein (DUF2513) 8.1E-10 7-77 / 7-83
PF09639.9 YjcQ protein 9.4E-10 9-77 / 2-81
PF13601.5 Winged helix DNA-binding domain 1.7E-09 8-77 / 3-70
PF09202.10 Rio2, N-terminal 1.7E-09 2-77 / 3-75
PF13463.5 Winged helix DNA-binding domain 1.8E-09 4-72 / 2-67
PF14394.5 Domain of unknown function (DUF4423) 2.3E-09 5-74 / 21-87
PF04492.12 Bacteriophage replication protein O 4.4E-09 2-69 / 24-93
PF05491.12 Holliday junction DNA helicase ruvB C-terminus 5.1E-09 2-77 / 5-74
PF14947.5 Winged helix-turn-helix 5.7E-09 6-77 / 3-69
PF01638.16 HxlR-like helix-turn-helix 6E-09 5-76 / 5-74
PF12793.6 Sugar transport-related sRNA regulator N-term 6.1E-09 9-76 / 6-72
PF01090.18 Ribosomal protein S19e 9.6E-09 7-78 / 53-134
PF04358.12 DsrC like protein 1.1E-08 2-57 / 36-95
PF01475.18 Ferric uptake regulator family 1.8E-08 2-70 / 4-73
PF05732.10 Firmicute plasmid replication protein (RepL) 2.1E-08 5-57 / 55-109
PF05158.11 RNA polymerase Rpc34 subunit 0.00057 3-57 / 11-68
PF03444.14 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 2.8E-08 3-77 / 2-75
PF16221.4 winged helix-turn-helix 2.9E-08 6-55 / 32-78
PF02002.16 TFIIE alpha subunit 4.2E-08 6-75 / 13-80
PF03428.12 Replication protein C N-terminal domain 4.3E-08 2-58 / 40-106
PF02295.16 Adenosine deaminase z-alpha domain 5E-08 4-57 / 3-53
PF08221.10 RNA polymerase III subunit RPC82 helix-turn-helix domain 6E-08 3-57 / 11-61
PF01978.18 Sugar-specific transcriptional regulator TrmB 8.9E-08 2-58 / 5-57
PF08784.10 Replication protein A C terminal 9.8E-08 3-57 / 38-95
PF02319.19 E2F/DP family winged-helix DNA-binding domain 2.1E-07 6-57 / 8-57
PF08222.10 CodY helix-turn-helix domain 2.6E-07 21-57 / 4-38
PF08461.9 Ribonuclease R winged-helix domain 2.6E-07 22-75 / 13-64
PF13034.5 Protein of unknown function (DUF3895) 2.7E-07 3-58 / 1-68
PF07106.12 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) 3E-07 7-58 / 3-53
PF07848.11 PaaX-like protein 3.1E-07 20-72 / 19-70
PF16864.4 Dimerisation domain 3.8E-07 7-77 / 20-80
PF14338.5 Mrr N-terminal domain 4.1E-07 32-77 / 48-86
PF04182.11 B-block binding subunit of TFIIIC 4.3E-07 5-58 / 2-53
PF09012.9 FeoC like transcriptional regulator 5E-07 19-58 / 12-49
PF06163.10 Bacterial protein of unknown function (DUF977) 5.2E-07 4-58 / 11-61
PF09904.8 Winged helix-turn helix 5.6E-07 7-73 / 9-74
PF01726.15 LexA DNA binding domain 6.2E-07 3-57 / 4-60
PF04703.11 FaeA-like protein 7.5E-07 8-69 / 3-60
PF01047.21 MarR family 8.2E-07 4-58 / 2-52
PF12802.6 MarR family 1.2E-06 2-58 / 2-56
PF01316.20 Arginine repressor, DNA binding domain 1.4E-06 3-71 / 3-67
PF12840.6 Helix-turn-helix domain 1.8E-06 4-57 / 7-54
PF09824.8 ArsR transcriptional regulator 1.9E-06 4-56 / 16-61
PF02082.19 Transcriptional regulator 2.9E-06 22-57 / 25-58
PF09339.9 IclR helix-turn-helix domain 3.8E-06 8-56 / 6-51
PF16365.4 Ethanolamine utilization protein EutK C-terminus 5.6E-06 8-56 / 5-50
PF03297.14 S25 ribosomal protein 5.9E-06 9-57 / 46-90
PF09821.8 C-terminal AAA-associated domain 6.9E-06 26-77 / 2-45
PF13730.5 Helix-turn-helix domain 9.8E-06 2-53 / 2-52
PF09182.9 Bacterial purine repressor, N-terminal 1.1E-05 6-57 / 5-59
PF13814.5 Replication-relaxation 1.1E-05 20-76 / 8-59
PF06969.15 HemN C-terminal domain 1.1E-05 21-73 / 20-65
PF07900.10 Protein of unknown function (DUF1670) 2.7E-05 20-57 / 94-129
PF08220.11 DeoR-like helix-turn-helix domain 3.5E-05 9-57 / 4-48
PF01325.18 Iron dependent repressor, N-terminal DNA binding domain 3.6E-05 20-57 / 20-55
PF01418.16 Helix-turn-helix domain, rpiR family 3.8E-05 3-57 / 14-68
PF00392.20 Bacterial regulatory proteins, gntR family 4.5E-05 20-57 / 22-58
PF15977.4 Winged helix-turn-helix DNA binding 8.3E-05 21-57 / 23-57
PF14502.5 Helix-turn-helix domain 0.00014 21-57 / 6-40
PF03501.14 Plectin/S10 domain 0.00021 32-78 / 36-78
PF09397.9 Ftsk gamma domain 0.00021 20-58 / 18-54
PF13545.5 Crp-like helix-turn-helix domain 0.00022 21-56 / 27-60
PF04458.11 Protein of unknown function (DUF505) 0.00031 5-77 / 493-557
PF09681.9 N-terminal phage replisome organiser (Phage_rep_org_N) 0.00094 24-56 / 56-86
PF13635.5 Domain of unknown function (DUF4143) 0.0045 8-57 / 17-66
PF04545.15 Sigma-70, region 4 0.0068 3-48 / 5-49
PF06971.12 Putative DNA-binding protein N-terminus 0.007 7-44 / 13-48

Annotations of the NCBI proteins of this PHROG


no RefSeq proteins in this PHROG (only proteins from VirSorter contigs)

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006276 plasmid maintenance
GO:0005524 ATP binding
GO:0005666 DNA-directed RNA polymerase III complex
GO:0006508 proteolysis
GO:0006352 DNA-templated transcription, initiation
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0051775 response to redox state
GO:0006355 regulation of transcription, DNA-templated
GO:0005737 cytoplasm
GO:0051304 chromosome separation
GO:0006412 translation
GO:0006525 arginine metabolic process
GO:0006281 DNA repair
GO:0004252 serine-type endopeptidase activity
GO:0003700 DNA binding transcription factor activity
GO:0005840 ribosome
GO:0006274 DNA replication termination
GO:0006468 protein phosphorylation
GO:0003677 DNA binding
GO:0003726 double-stranded RNA adenosine deaminase activity
GO:0006310 DNA recombination
GO:0006383 transcription by RNA polymerase III
GO:0005622 intracellular
GO:0009289 pilus
GO:0006260 DNA replication
GO:0004674 protein serine/threonine kinase activity
GO:0009378 four-way junction helicase activity
GO:0007131 reciprocal meiotic recombination
GO:0005667 transcription factor complex
GO:0045892 negative regulation of transcription, DNA-templated

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