phrog_27946 is made of 3 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
125 125 125


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p161613 no NCBI prot ID no annotation VI_04918 Bacilli_gi_402297927_7125_46941 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_030945_p8 YP_009276814.1 hypothetical protein NC_030945 Bacillus phage BalMu-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
KP063903_p8 AJA42386.1 hypothetical protein KP063903 Bacillus phage BalMu-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_296 415 DNA transposition protein integration and excision 3 6.68E-13 3.3
phrog_24404 3 no annotation unknown function 3 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_1373 transcriptional regulator transcription regulation 93.0 0.014 55-93 / 36-74

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF04936.11 Protein of unknown function (DUF658) 0.0058 16-44 / 87-115
PF01710.15 Transposase 1.9E-06 8-86 / 9-93
PF01381.21 Helix-turn-helix 0.00053 15-40 / 7-32
PF00292.17 'Paired box' domain 4.7E-06 9-42 / 25-58
PF07022.12 Bacteriophage CI repressor helix-turn-helix domain 6.5E-06 63-111 / 11-61
PF08822.10 Protein of unknown function (DUF1804) 8.8E-06 8-86 / 9-103
PF10654.8 Protein of unknown function (DUF2481) 0.0046 61-87 / 78-104
PF13744.5 Helix-turn-helix domain 1E-05 59-108 / 27-79
PF13443.5 Cro/C1-type HTH DNA-binding domain 0.0067 16-40 / 9-34
PF07141.10 Putative bacteriophage terminase small subunit 2.2E-05 9-42 / 23-56
PF12844.6 Helix-turn-helix domain 2.8E-05 62-110 / 11-61
PF05339.10 Protein of unknown function (DUF739) 0.0094 15-40 / 14-39
PF07750.10 GcrA cell cycle regulator 2.7E-05 8-43 / 9-45
PF13413.5 Helix-turn-helix domain 0.00073 15-40 / 7-32
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 3.3E-05 9-42 / 5-38
PF10078.8 Uncharacterized protein conserved in bacteria (DUF2316) 0.0005 55-109 / 15-77
PF12759.6 InsA C-terminal domain 6.6E-05 9-40 / 13-44
PF15943.4 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 0.006 16-38 / 7-29
PF05344.10 Domain of Unknown Function (DUF746) 0.00015 12-42 / 7-37
PF14590.5 Domain of unknown function (DUF4447) 0.00017 61-111 / 18-73
PF08765.10 Mor transcription activator family 0.0002 9-42 / 65-97
PF10975.7 Protein of unknown function (DUF2802) 0.00022 7-38 / 33-64
PF08667.9 BetR domain 0.00026 62-111 / 17-72
PF15731.4 Antitoxin component of bacterial toxin-antitoxin system, MqsA 0.00029 61-109 / 80-129
PF13693.5 Winged helix-turn-helix DNA-binding 0.00032 61-115 / 13-66
PF09607.9 Brinker DNA-binding domain 0.00037 10-42 / 14-50
PF14493.5 Helix-turn-helix domain 0.00041 10-42 / 5-37
PF08535.9 KorB domain 0.00045 16-42 / 2-28
PF04552.12 Sigma-54, DNA binding domain 0.00046 14-42 / 45-73
PF02796.14 Helix-turn-helix domain of resolvase 0.00049 10-39 / 14-43
PF14549.5 DNA-binding transcriptional regulator Cro 0.00053 61-108 / 8-53
PF17443.1 Uncharacterized protein pXO2-72 0.0006 16-42 / 7-33
PF13560.5 Helix-turn-helix domain 0.00072 61-107 / 12-63
PF03333.12 Adhesin biosynthesis transcription regulatory protein 0.00075 13-41 / 51-79
PF06322.10 Phage NinH protein 0.00077 10-42 / 8-41
PF05269.10 Bacteriophage CII protein 0.00079 62-111 / 22-71
PF00356.20 Bacterial regulatory proteins, lacI family 0.0053 66-89 / 2-25
PF13011.5 leucine-zipper of insertion element IS481 0.00096 14-42 / 21-49
PF13411.5 MerR HTH family regulatory protein 0.00096 19-42 / 2-25
PF13542.5 Helix-turn-helix domain of transposase family ISL3 0.001 10-40 / 20-49
PF12824.6 Mitochondrial ribosomal protein subunit L20 0.00096 9-40 / 96-130
PF00376.22 MerR family regulatory protein 0.0011 19-41 / 1-23
PF13936.5 Helix-turn-helix domain 0.0011 10-39 / 13-42
PF04645.11 Protein of unknown function, DUF603 0.0011 57-109 / 14-68
PF02954.18 Bacterial regulatory protein, Fis family 0.0012 16-39 / 15-38
PF10668.8 Phage terminase small subunit 0.0012 9-42 / 11-47
PF13518.5 Helix-turn-helix domain 0.0014 10-42 / 5-36
PF06806.11 Putative excisionase (DUF1233) 0.0013 17-39 / 9-31
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.0014 15-41 / 17-43
PF07453.12 NUMOD1 domain 0.0014 16-37 / 18-39
PF13309.5 HTH domain 0.0014 18-38 / 42-62
PF11112.7 Pyocin activator protein PrtN 0.0015 16-43 / 12-40
PF07278.10 Protein of unknown function (DUF1441) 0.0015 17-42 / 1-26
PF13591.5 MerR HTH family regulatory protein 0.0016 18-41 / 1-24
PF16677.4 DNA-packaging protein gp3 0.0017 16-41 / 28-53
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0018 17-41 / 23-47
PF05930.11 Prophage CP4-57 regulatory protein (AlpA) 0.0018 17-39 / 3-25
PF07506.10 RepB plasmid partitioning protein 0.0018 10-41 / 14-45
PF12116.7 Stage III sporulation protein D 0.0047 62-102 / 18-61
PF11242.7 Protein of unknown function (DUF2774) 0.0019 10-40 / 7-37
PF02376.14 CUT domain 0.0021 62-113 / 19-71
PF02042.14 RWP-RK domain 0.0024 15-42 / 10-37
PF15978.4 Tn7-like transposition protein D 0.0023 9-42 / 194-228
PF07638.10 ECF sigma factor 0.0024 14-40 / 146-172
PF01371.18 Trp repressor protein 0.0024 12-42 / 43-73
PF05331.10 Protein of unknown function (DUF742) 0.0027 16-40 / 52-76
PF05225.15 helix-turn-helix, Psq domain 0.0029 15-40 / 14-40
PF07900.10 Protein of unknown function (DUF1670) 0.0029 15-86 / 93-175
PF07825.10 Excisionase-like protein 0.0032 18-43 / 3-30
PF09035.9 Excisionase from transposon Tn916 0.0033 16-39 / 14-37
PF10743.8 Regulatory phage protein cox 0.0033 16-42 / 10-36
PF11427.7 Tc3 transposase 0.0037 12-40 / 15-43
PF06627.10 Protein of unknown function (DUF1153) 0.0037 15-42 / 44-71
PF13551.5 Winged helix-turn helix 0.0039 11-42 / 5-36
PF07037.10 Putative transcription regulator (DUF1323) 0.0041 18-40 / 1-23
PF06970.10 Replication initiator protein A (RepA) N-terminus 0.0042 19-39 / 53-73
PF13556.5 PucR C-terminal helix-turn-helix domain 0.0043 15-42 / 10-37
PF08004.10 Protein of unknown function (DUF1699) 0.0046 8-37 / 95-128
PF13404.5 AsnC-type helix-turn-helix domain 0.0052 16-39 / 16-39
PF01527.19 Transposase 0.0057 10-42 / 13-46
PF12964.6 Protein of unknown function (DUF3853) 0.0057 16-42 / 44-70
PF12728.6 Helix-turn-helix domain 0.0062 18-41 / 2-26
PF13412.5 Winged helix-turn-helix DNA-binding 0.0063 16-41 / 16-41
PF13384.5 Homeodomain-like domain 0.0064 10-41 / 10-41
PF08281.11 Sigma-70, region 4 0.0064 14-39 / 23-48
PF02319.19 E2F/DP family winged-helix DNA-binding domain 0.0066 16-41 / 22-47
PF07471.11 Phage DNA packaging protein Nu1 0.0069 17-41 / 2-26
PF00126.26 Bacterial regulatory helix-turn-helix protein, lysR family 0.0076 15-41 / 9-35
PF16509.4 TrfB plasmid transcriptional repressor 0.0077 14-40 / 28-54
PF04545.15 Sigma-70, region 4 0.0089 16-39 / 23-46

Annotations of the NCBI proteins of this PHROG


2:hypothetical protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0004803 transposase activity
GO:0043565 sequence-specific DNA binding
GO:0006310 DNA recombination
GO:0003677 DNA binding
GO:0003700 DNA binding transcription factor activity
GO:0006313 transposition, DNA-mediated
GO:0000150 recombinase activity
GO:0005524 ATP binding
GO:0016987 sigma factor activity
GO:0045892 negative regulation of transcription, DNA-templated
GO:0019069 viral capsid assembly
GO:0005667 transcription factor complex
GO:0005622 intracellular
GO:0006352 DNA-templated transcription, initiation
GO:0006355 regulation of transcription, DNA-templated

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