phrog_28897 is made of 2 protein sequences and is annotated as "unknown function"
Functional category: unknown function


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
64.5 68 68


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p409587 no NCBI prot ID no annotation VI_09776 Gammaproteobacteria_gi_472295859 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p351336 no NCBI prot ID no annotation VI_12037 Gammaproteobacteria_gi_483600969 Viruses.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
no colocalized PHROGS                                                                                          

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 91.7 0.03 3-47 / 138-174
phrog_16351 DNA binding protein DNA, RNA and nucleotide metabolism 91.1 0.041 1-13 / 1-13
phrog_17723 no annotation unknown function 93.3 0.011 3-33 / 6-38
phrog_22898 no annotation unknown function 95.4 0.00068 1-33 / 1-24
phrog_27136 no annotation unknown function 94.5 0.0029 1-34 / 1-24
phrog_28080 no annotation unknown function 92.4 0.021 6-32 / 7-31
phrog_2945 no annotation unknown function 96.9 6E-06 3-39 / 2-38
phrog_30477 no annotation unknown function 91.1 0.04 3-43 / 47-90
phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 92.4 0.02 3-32 / 214-247
phrog_47 DNA primase DNA, RNA and nucleotide metabolism 91.2 0.039 3-44 / 19-58
phrog_4852 no annotation unknown function 91.8 0.029 2-36 / 14-44
phrog_506 transposase integration and excision 90.0 0.065 2-36 / 315-344
phrog_599 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover 95.4 0.00075 1-39 / 11-51
phrog_9700 no annotation unknown function 94.7 0.0024 2-32 / 6-30

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF09538.9 Protein of unknown function (FYDLN_acid) 3.5E-09 4-46 / 5-41
PF08274.11 PhnA Zinc-Ribbon 5.2E-09 8-41 / 2-29
PF08271.11 TFIIB zinc-binding 5.4E-09 9-46 / 1-34
PF08792.9 A2L zinc ribbon domain 5.5E-09 8-42 / 3-32
PF03811.12 InsA N-terminal domain 6E-09 5-38 / 2-35
PF14205.5 Cysteine-rich KTR 1.7E-08 8-46 / 3-42
PF03966.15 Trm112p-like protein 3.2E-08 5-43 / 4-37
PF14803.5 Nudix N-terminal 3.9E-08 10-41 / 2-32
PF09723.9 Zinc ribbon domain 1.2E-07 5-41 / 2-34
PF07754.10 Domain of unknown function (DUF1610) 1.3E-07 11-39 / 1-24
PF05129.12 Transcription elongation factor Elf1 like 1.4E-07 5-46 / 18-60
PF09151.9 Domain of unknown function (DUF1936) 1.7E-07 10-40 / 1-33
PF02150.15 RNA polymerases M/15 Kd subunit 2.3E-07 9-44 / 2-30
PF13453.5 Transcription factor zinc-finger 2.3E-07 10-45 / 1-33
PF09297.10 NADH pyrophosphatase zinc ribbon domain 2.7E-07 8-41 / 3-31
PF06044.11 Dam-replacing family 4.4E-07 7-45 / 30-67
PF01780.18 Ribosomal L37ae protein family 5.2E-07 5-46 / 30-66
PF11781.7 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 5.9E-07 7-41 / 3-31
PF03604.12 DNA directed RNA polymerase, 7 kDa subunit 1.1E-06 9-42 / 1-28
PF04606.11 Ogr/Delta-like zinc finger 1.4E-06 10-44 / 1-40
PF14446.5 Prokaryotic RING finger family 1 1.4E-06 8-46 / 4-35
PF01096.17 Transcription factor S-II (TFIIS) 2.2E-06 10-41 / 2-36
PF12760.6 Transposase zinc-ribbon domain 2.8E-06 6-39 / 16-46
PF09855.8 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) 2.9E-06 30-42 / 34-46
PF13719.5 zinc-ribbon domain 4.4E-06 9-41 / 3-35
PF11023.7 Zinc-ribbon containing domain 4.4E-06 8-47 / 67-99
PF10122.8 Mu-like prophage protein Com 5.9E-06 7-42 / 3-34
PF04216.11 Protein involved in formate dehydrogenase formation 1.5E-05 7-17 / 171-181
PF09526.9 Probable metal-binding protein (DUF2387) 1.5E-05 5-46 / 5-46
PF09845.8 Zn-ribbon containing protein 2E-05 9-43 / 2-31
PF13717.5 zinc-ribbon domain 3.1E-05 9-41 / 3-36
PF16919.4 Protein kinase G rubredoxin domain 4.1E-05 7-44 / 84-120
PF17032.4 zinc-ribbon family 0.00084 31-42 / 82-93
PF01155.18 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 9.8E-05 6-41 / 68-96
PF01667.16 Ribosomal protein S27 0.00013 7-45 / 6-40
PF10083.8 Uncharacterized protein conserved in bacteria (DUF2321) 0.00013 31-45 / 65-79
PF14354.5 Restriction alleviation protein Lar 0.00017 8-39 / 3-34
PF07503.11 HypF finger 0.00019 11-42 / 2-32
PF14255.5 Cysteine-rich CPXCG 0.00026 10-45 / 2-38
PF07282.10 Putative transposase DNA-binding domain 0.0003 7-42 / 28-59
PF04810.14 Sec23/Sec24 zinc finger 0.00039 9-41 / 2-33
PF06827.13 Zinc finger found in FPG and IleRS 0.00053 9-38 / 2-28
PF05191.13 Adenylate kinase, active site lid 0.00076 9-41 / 2-31
PF11494.7 Ta0938 0.00081 6-45 / 12-51
PF08772.10 Nin one binding (NOB1) Zn-ribbon like 0.0009 6-41 / 6-33
PF13397.5 RNA polymerase-binding protein 0.0011 5-40 / 25-59
PF00301.19 Rubredoxin 0.0022 30-40 / 33-43
PF15135.5 Uncharacterised protein UPF0515 0.0033 29-42 / 175-188
PF04423.13 Rad50 zinc hook motif 0.0036 8-20 / 19-31
PF02701.14 Dof domain, zinc finger 0.0036 8-44 / 3-41
PF10071.8 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 0.0038 7-40 / 218-249
PF16866.4 PHD-finger 0.0049 7-44 / 3-43
PF14369.5 zinc-ribbon 0.0051 9-42 / 3-35
PF08394.9 Archaeal TRASH domain 0.0063 11-42 / 1-34
PF06906.10 Protein of unknown function (DUF1272) 0.0085 8-19 / 42-53

Annotations of the NCBI proteins of this PHROG


no RefSeq proteins in this PHROG (only proteins from VirSorter contigs)

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006886 intracellular protein transport
GO:0004017 adenylate kinase activity
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0051604 protein maturation
GO:0006351 transcription, DNA-templated
GO:0045893 positive regulation of transcription, DNA-templated
GO:0005622 intracellular
GO:0016151 nickel cation binding
GO:0016787 hydrolase activity
GO:0008270 zinc ion binding
GO:0001000 bacterial-type RNA polymerase core enzyme binding
GO:0003677 DNA binding
GO:0006313 transposition, DNA-mediated
GO:0030127 COPII vesicle coat
GO:0005840 ribosome
GO:0005887 integral component of plasma membrane
GO:0003676 nucleic acid binding
GO:0003735 structural constituent of ribosome
GO:0046872 metal ion binding
GO:0006412 translation
GO:0005737 cytoplasm
GO:0006355 regulation of transcription, DNA-templated
GO:0005506 iron ion binding
GO:0006888 ER to Golgi vesicle-mediated transport

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