phrog_2962 is made of 49 protein sequences and is annotated as "RNA polymerase beta subunit"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
431.22 536 430


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
KT895374_p303 ALN97982.1 putative DNA-directed RNA-polymerase beta-subunit KT895374 Bacillus phage vB_BpuM-BpSp Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_031039_p263 YP_009283168.1 DNA-directed RNA polymerase beta subunit NC_031039 Bacillus phage AR9 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
MF360957_p154 AST99976.1 RNA polymerase beta subunit MF360957 Bacillus virus PBS1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_016163_p232 YP_004934465.1 DNA-directed RNA-polymerase beta-subunit NC_016163 Yersinia phage phiR1-37 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
AP017925_p255 BAW19518.1 putative RNA polymerase beta prime subunit AP017925 Ralstonia phage RP31 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; unclassified Ripduovirus.
NC_021531_p43 YP_008125783.1 putative DNA-directed RNA polymerase beta' subunit 2 NC_021531 Cronobacter phage CR5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
MF459647_p50 ASU03865.1 putative DNA directed RNA polymerase beta subunit MF459647 Erwinia phage vB_EamM_Joad Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Risingsunvirus; unclassified Risingsunvirus.
MF459646_p50 ASU03620.1 putative DNA directed RNA polymerase beta subunit MF459646 Erwinia phage vB_EamM_RisingSun Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Risingsunvirus; Erwinia virus Risingsun.
NC_007623_p44 YP_418077.1 hypothetical protein NC_007623 Pseudomonas phage EL Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Elvirus.
AP017924_p258 BAW19232.1 putative RNA polymerase beta prime subunit AP017924 Ralstonia phage RP12 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; Ralstonia virus RP12.
NC_010821_p137 YP_001956863.1 hypothetical protein NC_010821 Pseudomonas phage 201phi2-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
MF063068_p76 ARV77247.1 putative RNA polymerase beta subunit MF063068 Pseudomonas phage Noxifer Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Noxifervirus; Pseudomonas virus Noxifer.
MG655268_p272 AUG86379.1 DNA-directed RNA polymerase beta MG655268 Erwinia phage vB_EamM_Desertfox Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Desertfox.
MF805716_p272 ATN94849.1 hypothetical protein MF805716 Pseudomonas phage SL2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; Pseudomonas virus SL2.
NC_028950_p192 YP_009213041.1 hypothetical protein NC_028950 Ralstonia phage RSL2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chiangmaivirus.
KU886222_p273 ANJ65085.1 DNA-directed RNA polymerase beta KU886222 Erwinia phage vB_EamM_Special G Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus SpecialG.
NC_004629_p80 NP_803646.1 ORF080 NC_004629 Pseudomonas phage phiKZ Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus.
NC_017975_p31 YP_006383311.1 hypothetical protein NC_017975 Halocynthia phage JM-2012 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_027402_p42 YP_009153336.1 putative DNA-directed RNA polymerase beta subunit 3 NC_027402 Salmonella phage SPN3US Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Seoulvirus.
NC_016571_p90 YP_004957997.1 putative virion-associated RNA polymerase beta' subunit NC_016571 Pseudomonas phage OBP Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
MG655267_p272 AUG86059.1 DNA-directed RNA polymerase beta MG655267 Erwinia phage vB_EamM_Bosolaphorus Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
NC_031043_p44 YP_009283533.1 putative DNA-directed RNA polymerase beta subunit NC_031043 Erwinia phage vB_EamM_Phobos Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
NC_023557_p270 YP_009005062.1 hypothetical protein NC_023557 Erwinia phage Ea35-70 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus.
NC_019929_p225 YP_007237875.1 phage putative RNA polymerase beta subunit 3 NC_019929 Erwinia phage phiEaH2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus.
KU886224_p269 ANH52050.1 putative DNA-directed RNA polymerase beta prime subunit KU886224 Erwinia phage vB_EamM_RAY Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus RAY.
MG655269_p273 AUG86700.1 DNA-directed RNA polymerase beta MG655269 Erwinia phage vB_EamM_MadMel Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
KC131130_p100 AGB07214.1 hypothetical protein KC131130 Vibrio phage VP4B Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tidunavirus; Vibrio virus VP4B.
MG655270_p276 AUG87025.1 DNA-directed RNA polymerase beta MG655270 Erwinia phage vB_EamM_Mortimer Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
NC_031107_p47 YP_009290677.1 putative RNA polymerase beta subunit NC_031107 Erwinia phage vB_EamM_Asesino Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus.
NC_028899_p199 YP_009208003.1 putative RNA polymerase beta prime subunit NC_028899 Ralstonia phage RSF1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chiangmaivirus.
KU886225_p276 ANH52375.1 DNA-directed RNA polymerase beta KU886225 Erwinia phage vB_EamM_Deimos-Minion Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Deimos.
NC_031010_p46 YP_009278659.1 putative DNA-directed RNA polymerase beta subunit NC_031010 Erwinia phage vB_EamM_Kwan Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_031120_p45 YP_009292125.1 putative DNA-directed RNA polymerase beta subunit NC_031120 Erwinia phage vB_EamM_Caitlin Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
KX397373_p45 ANZ50482.1 putative RNA polymerase beta subunit KX397373 Erwinia phage vB_EamM_Stratton Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus; unclassified Erskinevirus.
NC_028999_p75 YP_009217157.1 putative RNA polymerase beta subunit NC_028999 Pseudomonas phage PhiPA3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
KU521356_p106 ANM44864.1 putative beta/beta'-like virion-associated protein KU521356 Pseudomonas phage KTN4 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; Pseudomonas virus phiKZ.
MF042360_p124 ARV76755.1 putative RNA polymerase beta subunit MF042360 Pseudomonas phage Phabio Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
NC_031126_p47 YP_009292747.1 putative DNA-directed RNA polymerase beta subunit NC_031126 Erwinia phage vB_EamM_ChrisDB Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
KU886223_p274 ANH51733.1 putative RNA polymerase beta prime subunit KU886223 Erwinia phage vB_EamM_Simmy50 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Simmy50.
NC_023610_p239 YP_009010292.1 hypothetical protein NC_023610 Erwinia phage PhiEaH1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Iapetusvirus; Erwinia virus EaH1.
KY499642_p228 AQT28169.1 putative DNA-directed RNA polymerase beta subunit KY499642 Vibrio phage pVa-21 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
KU726251_p42 AMR59693.1 putative DNA-directed RNA polymerase beta subunit 3 KU726251 Enterobacteria phage SEGD1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Seoulvirus; Salmonella virus SPN3US.
KX397370_p49 ANZ49696.1 putative DNA-directed RNA polymerase beta subunit KX397370 Erwinia phage vB_EamM_Machina Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; Erwinia virus Machina.
NC_031007_p44 YP_009278356.1 putative DNA-directed RNA polymerase beta subunit NC_031007 Erwinia phage vB_EamM_EarlPhillipIV Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
KX397371_p50 ANZ49969.1 putative DNA-directed RNA polymerase beta subunit KX397371 Erwinia phage vB_EamM_Parshik Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
MG720308_p88 AUR80959.1 hypothetical protein MG720308 Vibrio phage Aphrodite1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Aphroditevirus; Vibrio virus Aphrodite1.
NC_031127_p50 YP_009293027.1 putative DNA-directed RNA polymerase beta subunit NC_031127 Erwinia phage vB_EamM_Huxley Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
AP017972_p109 BAW98318.1 phage protein AP017972 Vibrio phage pTD1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tidunavirus; Vibrio virus pTD1.
MF285618_p363 ATA65698.1 hypothetical protein MF285618 Serratia phage 2050HW Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_5038 26 no annotation unknown function 25 3.15E-107 97.62
phrog_7807 15 no annotation unknown function 15 0 1000
phrog_7825 15 no annotation unknown function 15 0 1000
phrog_6749 18 no annotation unknown function 9 1.42E-36 26.97
phrog_18270 5 virion structural protein head and packaging 5 0 1000
phrog_38842 2 no annotation unknown function 2 0 1000
phrog_38479 2 no annotation unknown function 2 0 1000
phrog_35954 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_25354 no annotation unknown function 95.7 0.00039 241-418 / 742-945
phrog_3015 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 98.9 8.8E-13 158-410 / 110-368

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF04998.16 RNA polymerase Rpb1, domain 5 7.4E-31 277-432 / 1-183
PF04983.17 RNA polymerase Rpb1, domain 3 3.7E-05 133-187 / 122-165
PF05000.16 RNA polymerase Rpb1, domain 4 0.0024 240-269 / 58-86

Annotations of the NCBI proteins of this PHROG


10:DNA-directed RNA polymerase beta subunit 8:hypothetical protein 6:DNA-directed RNA polymerase beta 6:RNA polymerase beta subunit 4:RNA polymerase beta prime subunit 4:protein of an unannotated phage 2:DNA-directed RNA polymerase beta subunit 3 2:DNA-directed RNA-polymerase beta-subunit 2:DNA directed RNA polymerase beta subunit 1:beta/beta'-like virion-associated protein 1:phage RNA polymerase beta subunit 3 1:virion-associated RNA polymerase beta' subunit 1:DNA-directed RNA polymerase beta' subunit 2 1:DNA-directed RNA polymerase beta prime subunit

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K03046 rpoC : DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] ko00230 Purine metabolism
ko00240 Pyrimidine metabolism
ko03020 RNA polymerase
53 9

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006351 transcription, DNA-templated
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity

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