phrog_2986 is made of 48 protein sequences and is annotated as "RNA polymerase beta subunit"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
532.65 689 539


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
MG655270_p168 AUG86917.1 putative DNA-direct RNA polymerase beta subunit 2 MG655270 Erwinia phage vB_EamM_Mortimer Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
NC_031127_p243 YP_009293220.1 putative DNA-directed RNA polymerase beta subunit NC_031127 Erwinia phage vB_EamM_Huxley Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
NC_031010_p258 YP_009278871.1 putative DNA-directed RNA polymerase beta subunit NC_031010 Erwinia phage vB_EamM_Kwan Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_021531_p208 YP_008125948.1 putative DNA-directed RNA polymerase beta subunit 2 NC_021531 Cronobacter phage CR5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
NC_023557_p163 YP_009004955.1 hypothetical protein NC_023557 Erwinia phage Ea35-70 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus.
MG655268_p164 AUG86271.1 putative DNA-direct RNA polymerase beta subunit 2 MG655268 Erwinia phage vB_EamM_Desertfox Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Desertfox.
NC_023610_p146 YP_009010199.1 putative DNA-directed RNA polymerase beta subunit NC_023610 Erwinia phage PhiEaH1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Iapetusvirus; Erwinia virus EaH1.
NC_007623_p184 YP_418217.1 hypothetical protein NC_007623 Pseudomonas phage EL Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Elvirus.
KX397373_p250 ANZ50687.1 putative DNA-directed RNA polymerase beta subunit KX397373 Erwinia phage vB_EamM_Stratton Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus; unclassified Erskinevirus.
KU521356_p220 ANM44978.1 putative beta/beta'-like virion-associated protein KU521356 Pseudomonas phage KTN4 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; Pseudomonas virus phiKZ.
NC_031043_p222 YP_009283711.1 putative DNA-directed RNA polymerase beta subunit NC_031043 Erwinia phage vB_EamM_Phobos Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
NC_031039_p144 YP_009283049.1 DNA-directed RNA polymerase beta' subunit NC_031039 Bacillus phage AR9 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
MF042360_p264 ARV76895.1 putative RNA polymerase beta subunit MF042360 Pseudomonas phage Phabio Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
NC_017975_p119 YP_006383399.1 hypothetical protein NC_017975 Halocynthia phage JM-2012 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
KU726251_p241 AMR59892.1 putative DNA-directed RNA polymerase beta subunit KU726251 Enterobacteria phage SEGD1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Seoulvirus; Salmonella virus SPN3US.
MG655267_p165 AUG85952.1 putative DNA-direct RNA polymerase beta subunit 2 MG655267 Erwinia phage vB_EamM_Bosolaphorus Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
AP017925_p39 BAW19302.1 putative RNA polymerase beta prime subunit AP017925 Ralstonia phage RP31 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; unclassified Ripduovirus.
NC_031126_p252 YP_009292952.1 putative DNA-directed RNA polymerase beta subunit NC_031126 Erwinia phage vB_EamM_ChrisDB Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
NC_031120_p245 YP_009292325.1 putative DNA-directed RNA polymerase beta subunit NC_031120 Erwinia phage vB_EamM_Caitlin Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
NC_031107_p250 YP_009290880.1 putative DNA-directed RNA polymerase beta subunit NC_031107 Erwinia phage vB_EamM_Asesino Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus.
NC_028899_p41 YP_009207845.1 putative RNA polymerase beta prime subunit NC_028899 Ralstonia phage RSF1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chiangmaivirus.
MG720308_p10 AUR80938.1 hypothetical protein MG720308 Vibrio phage Aphrodite1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Aphroditevirus; Vibrio virus Aphrodite1.
AP017924_p42 BAW19016.1 putative RNA polymerase beta prime subunit AP017924 Ralstonia phage RP12 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; Ralstonia virus RP12.
NC_016163_p179 YP_004934412.1 RNA-polymerase beta'-subunit NC_016163 Yersinia phage phiR1-37 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
KT895374_p212 ALN97891.1 RNA-polymerase beta'-subunit KT895374 Bacillus phage vB_BpuM-BpSp Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
KU886225_p169 ANH52267.2 putative DNA-direct RNA polymerase beta subunit 2 KU886225 Erwinia phage vB_EamM_Deimos-Minion Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Deimos.
AP017972_p193 BAW98402.1 phage protein AP017972 Vibrio phage pTD1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tidunavirus; Vibrio virus pTD1.
NC_028950_p38 YP_009212887.1 hypothetical protein NC_028950 Ralstonia phage RSL2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chiangmaivirus.
MG655269_p165 AUG86593.1 putative DNA directed RNA polymerase beta subunit 2 MG655269 Erwinia phage vB_EamM_MadMel Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
NC_027402_p240 YP_009153534.1 putative DNA-directed RNA polymerase beta subunit 4 NC_027402 Salmonella phage SPN3US Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Seoulvirus.
KX397371_p243 ANZ50162.1 putative DNA-directed RNA polymerase beta subunit KX397371 Erwinia phage vB_EamM_Parshik Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
MF459647_p231 ASU03684.1 putative DNA-directed RNA polymerase beta subunit 2 MF459647 Erwinia phage vB_EamM_Joad Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Risingsunvirus; unclassified Risingsunvirus.
KC131130_p15 AGB07129.1 hypothetical protein KC131130 Vibrio phage VP4B Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tidunavirus; Vibrio virus VP4B.
NC_010821_p271 YP_001956997.1 hypothetical RNA polymerase beta' subunit NC_010821 Pseudomonas phage 201phi2-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
NC_031007_p216 YP_009278528.1 putative DNA-directed RNA polymerase beta subunit NC_031007 Erwinia phage vB_EamM_EarlPhillipIV Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
MF459646_p229 ASU03441.1 putative DNA-directed RNA polymerase beta subunit 2 MF459646 Erwinia phage vB_EamM_RisingSun Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Risingsunvirus; Erwinia virus Risingsun.
NC_019929_p160 YP_007237810.1 putative phage DNA-directed RNA polymerase beta subunit NC_019929 Erwinia phage phiEaH2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus.
KY499642_p166 AQT28107.1 putative DNA-directed RNA polymerase beta subunit KY499642 Vibrio phage pVa-21 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_004629_p180 NP_803746.1 ORF180 NC_004629 Pseudomonas phage phiKZ Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus.
KU886223_p166 ANH51628.1 putative RNA polymerase beta subunit KU886223 Erwinia phage vB_EamM_Simmy50 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Simmy50.
MF063068_p196 ARV77365.1 putative RNA polymerase beta subunit MF063068 Pseudomonas phage Noxifer Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Noxifervirus; Pseudomonas virus Noxifer.
MF805716_p159 ATN94736.1 hypothetical protein MF805716 Pseudomonas phage SL2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; Pseudomonas virus SL2.
NC_016571_p277 YP_004958184.1 putative virion-associated RNA polymerase beta' subunit NC_016571 Pseudomonas phage OBP Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_028999_p209 YP_009217291.1 putative RNA polymerase beta subunit NC_028999 Pseudomonas phage PhiPA3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
KX397370_p244 ANZ49891.1 putative DNA-directed RNA polymerase beta subunit KX397370 Erwinia phage vB_EamM_Machina Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; Erwinia virus Machina.
KU886222_p165 ANJ64975.1 putative DNA-direct RNA polymerase beta subunit 2 KU886222 Erwinia phage vB_EamM_Special G Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus SpecialG.
KU886224_p163 ANH51944.1 putative DNA-direct RNA polymerase beta subunit 2 KU886224 Erwinia phage vB_EamM_RAY Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus RAY.
MF360957_p35 AST99857.1 RNA polymerase beta subunit MF360957 Bacillus virus PBS1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_3148 46 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 40 8.64E-180 170.18

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_25354 no annotation unknown function 97.0 3.9E-06 9-253 / 11-346
phrog_2987 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 96.0 0.00015 23-511 / 26-452

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF04997.11 RNA polymerase Rpb1, domain 1 3.7E-34 2-241 / 2-337
PF00623.19 RNA polymerase Rpb1, domain 2 5.1E-22 243-511 / 1-176
PF02195.17 ParB-like nuclease domain 1.2E-09 591-659 / 2-80

Annotations of the NCBI proteins of this PHROG


13:DNA-directed RNA polymerase beta subunit 6:DNA-direct RNA polymerase beta subunit 2 5:hypothetical protein 5:RNA polymerase beta subunit 4:protein of an unannotated phage 3:DNA-directed RNA polymerase beta subunit 2 3:RNA polymerase beta prime subunit 2:RNA-polymerase beta'-subunit 1:virion-associated RNA polymerase beta' subunit 1:beta/beta'-like virion-associated protein 1:DNA-directed RNA polymerase beta' subunit 1:phage DNA-directed RNA polymerase beta subunit 1:hypothetical RNA polymerase beta' subunit 1:DNA directed RNA polymerase beta subunit 2 1:DNA-directed RNA polymerase beta subunit 4

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K03046 rpoC : DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] ko00230 Purine metabolism
ko00240 Pyrimidine metabolism
ko03020 RNA polymerase
54 2

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0003677 DNA binding
GO:0006351 transcription, DNA-templated

Loading in process