PHROGS

Average length of proteins	Number of columns in the MSA	Number of conserved columns in the MSA
596.85	960	579

List of all proteins of this PHROG

PHROG prot ID	NCBI prot ID	NCBI prot annotation	Virus ID (click to view)	Virus name	Virus taxonomy
NC_031039_p131	YP_009283036.1	DNA polymerase	NC_031039	Bacillus phage AR9	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
MF360957_p19	AST99841.1	DNA polymerase	MF360957	Bacillus virus PBS1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_016163_p171	YP_004934404.1	B-family DNA-polymerase	NC_016163	Yersinia phage phiR1-37	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
MF459646_p56	ASU03614.1	putative DNA polymerase	MF459646	Erwinia phage vB_EamM_RisingSun	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Risingsunvirus; Erwinia virus Risingsun.
KX397373_p47	ANZ50484.1	hypothetical protein	KX397373	Erwinia phage vB_EamM_Stratton	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus; unclassified Erskinevirus.
NC_019929_p227	YP_007237877.1	hypothetical protein	NC_019929	Erwinia phage phiEaH2	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus.
NC_021531_p45	YP_008125785.1	hypothetical protein	NC_021531	Cronobacter phage CR5	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
MG655269_p288	AUG86715.1	putative DNA polymerase	MG655269	Erwinia phage vB_EamM_MadMel	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
NC_031010_p49	YP_009278662.1	hypothetical protein	NC_031010	Erwinia phage vB_EamM_Kwan	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_016571_p99	YP_004958006.1	T4-like DNA polymerase	NC_016571	Pseudomonas phage OBP	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_004629_p82	NP_803648.1	ORF082	NC_004629	Pseudomonas phage phiKZ	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus.
NC_031120_p47	YP_009292127.1	hypothetical protein	NC_031120	Erwinia phage vB_EamM_Caitlin	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
KU886225_p291	ANH52390.1	putative DNA polymerase	KU886225	Erwinia phage vB_EamM_Deimos-Minion	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Deimos.
KU886223_p289	ANH51748.1	putative DNA polymerase	KU886223	Erwinia phage vB_EamM_Simmy50	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Simmy50.
MF042360_p128	ARV76759.1	hypothetical protein	MF042360	Pseudomonas phage Phabio	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
MG655268_p287	AUG86394.1	putative DNA polymerase	MG655268	Erwinia phage vB_EamM_Desertfox	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Desertfox.
KX397370_p51	ANZ49698.1	hypothetical protein	KX397370	Erwinia phage vB_EamM_Machina	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; Erwinia virus Machina.
NC_031126_p49	YP_009292749.1	putative B family DNA polymerase	NC_031126	Erwinia phage vB_EamM_ChrisDB	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
KU726251_p44	AMR59695.1	hypothetical protein	KU726251	Enterobacteria phage SEGD1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Seoulvirus; Salmonella virus SPN3US.
MG720308_p95	AUR80935.1	putative DNA polymerase	MG720308	Vibrio phage Aphrodite1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Aphroditevirus; Vibrio virus Aphrodite1.
AP017972_p102	BAW98311.1	phage protein	AP017972	Vibrio phage pTD1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tidunavirus; Vibrio virus pTD1.
MF805716_p270	ATN94847.1	hypothetical protein	MF805716	Pseudomonas phage SL2	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; Pseudomonas virus SL2.
KU521356_p108	ANM44866.1	hypothetical protein	KU521356	Pseudomonas phage KTN4	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; Pseudomonas virus phiKZ.
NC_028950_p179	YP_009213028.1	hypothetical protein	NC_028950	Ralstonia phage RSL2	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chiangmaivirus.
NC_031127_p52	YP_009293029.1	putative B family DNA polymerase	NC_031127	Erwinia phage vB_EamM_Huxley	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
KU886222_p288	ANJ65100.1	putative DNA polymerase	KU886222	Erwinia phage vB_EamM_Special G	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus SpecialG.
AP017925_p248	BAW19511.1	putative T4-like DNA polymerase	AP017925	Ralstonia phage RP31	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; unclassified Ripduovirus.
MF063068_p83	ARV77505.1	hypothetical protein	MF063068	Pseudomonas phage Noxifer	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Noxifervirus; Pseudomonas virus Noxifer.
NC_031043_p47	YP_009283536.1	putative B family DNA polymerase	NC_031043	Erwinia phage vB_EamM_Phobos	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
KX397371_p52	ANZ49971.1	putative DNA polymerase	KX397371	Erwinia phage vB_EamM_Parshik	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
KU886224_p284	ANH52065.1	putative DNA polymerase	KU886224	Erwinia phage vB_EamM_RAY	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus RAY.
AP017924_p251	BAW19225.1	putative T4-like DNA polymerase	AP017924	Ralstonia phage RP12	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; Ralstonia virus RP12.
MG655267_p287	AUG86074.1	putative DNA polymerase	MG655267	Erwinia phage vB_EamM_Bosolaphorus	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
NC_023610_p236	YP_009010289.1	hypothetical protein	NC_023610	Erwinia phage PhiEaH1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Iapetusvirus; Erwinia virus EaH1.
NC_007623_p51	YP_418084.1	hypothetical protein	NC_007623	Pseudomonas phage EL	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Elvirus.
NC_027402_p44	YP_009153338.1	hypothetical protein	NC_027402	Salmonella phage SPN3US	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Seoulvirus.
NC_031107_p49	YP_009290679.1	hypothetical protein	NC_031107	Erwinia phage vB_EamM_Asesino	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus.
MF459647_p56	ASU03859.1	putative DNA polymerase	MF459647	Erwinia phage vB_EamM_Joad	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Risingsunvirus; unclassified Risingsunvirus.
NC_017975_p24	YP_006383304.1	hypothetical protein	NC_017975	Halocynthia phage JM-2012	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
MG655270_p291	AUG87040.1	putative DNA polymerase	MG655270	Erwinia phage vB_EamM_Mortimer	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
NC_023557_p285	YP_009005077.1	hypothetical protein	NC_023557	Erwinia phage Ea35-70	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus.
KY499642_p231	AQT28172.1	putative B family DNA polymerase	KY499642	Vibrio phage pVa-21	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
KC131130_p107	AGB07221.1	hypothetical protein	KC131130	Vibrio phage VP4B	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tidunavirus; Vibrio virus VP4B.
MF285618_p9	ATA65344.1	hypothetical protein	MF285618	Serratia phage 2050HW	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_031007_p46	YP_009278358.1	hypothetical protein	NC_031007	Erwinia phage vB_EamM_EarlPhillipIV	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
NC_028999_p83	YP_009217165.1	hypothetical protein	NC_028999	Pseudomonas phage PhiPA3	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
NC_028899_p189	YP_009207993.1	hypothetical protein	NC_028899	Ralstonia phage RSF1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chiangmaivirus.
NC_010821_p142	YP_001956868.1	hypothetical protein	NC_010821	Pseudomonas phage 201phi2-1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.

PHROGs colocalized to this PHROG

PHROG	#Prot	Annotation	Category	#Neighbors	Probability	Score
phrog_11790	9	no annotation	unknown function	9	0	1000
phrog_9995	10	no annotation	unknown function	4	7.30E-21	11.26
phrog_18270	5	virion structural protein	head and packaging	3	5.01E-18	8.42
phrog_37561	2	no annotation	unknown function	2	0	1000
phrog_33573	2	no annotation	unknown function	2	0	1000

PHROGs similar to this PHROG

PHROG	Annotation	Category	Probability	Evalue	posQ/posS
phrog_2062	DNA polymerase	DNA, RNA and nucleotide metabolism	99.6	4.1E-19	119-521 / 81-415
phrog_262	DNA polymerase	DNA, RNA and nucleotide metabolism	99.7	1E-20	43-543 / 23-440
phrog_403	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism	93.7	0.0072	234-432 / 73-225

PFAMs similar to this PHROG

ID	Definition	Evalue	posQ/posS
PF14216.5	Domain of unknown function (DUF4326)	5.6E-18	10-103 / 2-85
PF03337.12	Poxvirus F12L protein	1.5E-11	348-642 / 238-460
PF00136.20	DNA polymerase family B	8.6E-11	532-645 / 1-95
PF03175.12	DNA polymerase type B, organellar and viral	4.1E-10	503-640 / 140-257
PF03104.18	DNA polymerase family B, exonuclease domain	2.1E-09	349-472 / 232-334
PF10108.8	Predicted 3'-5' exonuclease related to the exonuclease domain of PolB	1.3E-08	350-527 / 33-174
PF00929.23	Exonuclease	5.8E-08	272-391 / 1-103
PF13361.5	UvrD-like helicase C-terminal domain	3.4E-07	173-392 / 93-304
PF08490.11	Domain of unknown function (DUF1744)	9E-05	531-642 / 125-229
PF13482.5	RNase_H superfamily	0.00019	465-525 / 98-155
PF16473.4	3' exoribonuclease, RNase T-like	0.00074	270-390 / 1-119
PF04343.12	Protein of unknown function, DUF488	0.0077	85-105 / 88-109

Annotations of the NCBI proteins of this PHROG

22:hypothetical protein 14:DNA polymerase 4:protein of an unannotated phage 4:B family DNA polymerase 3:T4-like DNA polymerase 1:B-family DNA-polymerase

KEGG orthologous groups similar to this PHROG

ID	Name : Definition	Pathways	BestScore	#Hits
K02319	DPA, polB : DNA polymerase I [EC:2.7.7.7]	ko00230 Purine metabolism ko00240 Pyrimidine metabolism ko03030 DNA replication	51	2

GO terms in Uniprot proteins similar to this PHROG

ID	Definition
GO:0016032	viral process
GO:0005634	nucleus
GO:0005524	ATP binding
GO:0008270	zinc ion binding
GO:0003677	DNA binding
GO:0006260	DNA replication
GO:0016787	hydrolase activity
GO:0003887	DNA-directed DNA polymerase activity
GO:0000166	nucleotide binding

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>NC_031039_p131
------------------------------------------------------------
------------------------------------------------------------
-------------MVQMINTHYFYPDRKS------KDGFDKVLFIVKDENGNKRCETIEK
PVIEYYITK--PQYWDGKLRN----------YIEKDKVLPIKCYAKDLYKSIITTLNDQN
LTNYFWDTIKSGGYGIGKKLNRIHLDYRLHGSDVNIQDYYIS-QFLKKHPVDKN--NFGL
TKVVYDIEVDIEKIVGFPEPEEAEAPVNIMTLIDMD---NLNCYTLCLKYNHD-----TY
VETMSNLDSIKSELEERYKKIL----------------------------KGRKMNFIIE
EWESEIHMIKRFYDLINIEIKPDFVLAWNGHGFDNPYLMNRIMRLGYNPEDIMCPKEFKY
--KRVSYRKDTF-------------NQDPSDNGNEMNVTSYSVYLDAMNLYANLRKG-MG
KEESYSLDYIGEKEV---------------------------------------------
------------------------------------------------------------
------------------------GLTKDVMEEGF---KTFHITDYKK---------FMF
YNIQDTVMMMMMEEKNRDVDAIYS-VAMLTETRIEKAMKKTICLRNLASKFYREK--GVY
ISNNRAKIR-------EQTEGKIKGAFVANP------NNIDNIGIELLGEKSKFLFENCI
DFDLSSLYPSIIQAFNISPETCYGRVIIEEDGNDISKEYVD------------DYSSKDY
INFGNKWHNLPTTSDLIQKLKQQKQLQVS-------------------------------
>MF360957_p19
------------------------------------------------------------
------------------------------------------------------------
-------------MVQMINTHYFYPDRKS------KDGFDKVLFIVKDENGNKRCETIEK
PVIEYYITK--PQYWDGKLRN----------YIEKDKVLPIKCYAKDLYKSIITTLNDQN
LTNYFWDTIKSGGYGIGKKLNRIHLDYRLHGSDVNIQDYYIS-QFLKKHPVDKN--NFGL
TKVVYDIEVDIEKIVGFPEPEEAEAPVNIMTLIDMD---NLNCYTLCLKYNHD-----TY
VETMSNLDSIKSELEERYKKIL----------------------------KGRKMNFIIE
EWESEIHMIKRFYDLINIEIKPDFVLAWNGHGFDNPYLMNRIMRLGYNPEDIMCPKEFKY
--KRVSYRKDTF-------------NQDPSDNGNEMNVTSYSVYLDAMNLYANLRKG-MG
KEESYSLDYIGEKEV---------------------------------------------
------------------------------------------------------------
------------------------GLTKDVMEEGF---KTFHITDYKK---------FMF
YNIQDTVMMMMMEEKNRDVDAIYS-VAMLTETRIEKAMKKTICLRNLASKFYREK--GVY
ISNNRAKIR-------EQTEGKIKGAFVANP------NNIDNIGIELLGEKSKFLFENCI
DFDLSSLYPSIIQAFNISPETCYGRVIIEEDGNDISKEYVD------------DYSSKDY
INFGNKWHNLPTTSDLIQKLKQQKQLQVS-------------------------------
>NC_016163_p171
------------------------------------------------------------
------------------------------------------------------------
-------MTKPTVTKQLISTQLVYDENFN-----PNLITIEKIKDQVTGKIKKKASFDSD
PKITYFITK--PEHELTYPVK----------VIERDKLIPITTSYKDLFKSIAKARKRMN
EYNEAKNTRKRG------KFRFLHNDCNVYGSDVDLADYAMM-EWEKNTPPDVQDASLPL
EKVFSDIEVDIYNYEGFPVEELAPCEINFVSYVNPN---RGSLVKVWVLFNEENHSMAEF
IDNYADGSALLSSDDNEYAKYVLDD--------------FINNNDTEKLKFHKFKTLEIE
FFDDELELIKSYMNQVK-KDKPDFNALWNA-HFDIRTFYERILKLGGDPVEIFCPENFPV
--KKCEIRKDER-------------AKDVADRSHTFDISGYTHWVDLLYFYAANRKA-KG
QKESWKLQDILLSEL---------------------------------------------
------------------------------------------------------------
------------------------GEGKFEYEGDI---KTAAYVNFES---------FLK
YSIYDSYRMYQLETKCRDIDVMYA-NSLMTCTRLNKVLKKTTSIKNIAKVFLEKE--GYI
LSNNLNIFI-------EREKKKFQGAFVLDP------TMMQKVGTFINGRRTANIFEDTI
DEDLSSMYPSIILAYGIDNETLLGKFLVFLDEEEETTDPLFDSFGEKMMEDDPEIIATTY
FNLKPAAYYLERLDDFIEK-----------------------------------------
>MF459646_p56
------------------------------------------------------------
------------------------------------------------------------
------MTPNSSPIVARVCKHANYGVHRY--DPMKDLLGAKITNIHEDGTRSNQYTCIED
YKQDFYIVK--EKY-----RK----FEQNKDYIDERMCKKYSSSRARLAYNISKILYGR-
-------------PDVTAQLRQMKGSQYVFGCEQTIPVVFKQ-KFHEKYPEHQE--TEPY
RTAAYDVETNMH----SP-----DEEIIMASTTFEK-VAYFAADRNWFDEKND-------
-------EEILANLRKY-----------------------EELYLRETLNRRGISHVEYE
LFDNEALIVKANIEKWHQ-WSPDWIASWNA-AFDMEKNETALKRHGFDVARIYCDPGVPN
HYCNYEFHPGRTHKVKENGDRT---PLEWQEKFPTVRTLASWQWVDAACKYAIKRAP-QG
KLESYGLNATAEREK---------------------------------------------
------------------------------------------------------------
------------------------VDGKLYTDKGE--HLLPGTLPWHIWMQKNAKYEYCM
YNIKDNIVIEDINDKTDDLSLSLPMLLKYSEYFNYPSQPSIIS--DTLSFVAKKY--GYV
WGCTGARRE----KPFTDILPTLGDWIALLETEKNAAMGKV-LFEGLSDVVSM-ARGLTD
DVDVEGAYPTETVALNVGNKTTKMEATRIQGADMMKFREIGVNYGSSPQ--------ANA
ISLCYELFRFPKAGEIQEVFESHLIKLGKEDVLN-KLKAAEF------------------
>KX397373_p47
------------------------------------------------------------
------------------------------------------------------------
---MINNYFAPEDVIAKECKHVAYATDD---EKQNDFVLVKEVIHTKDGRLIPRVFGREN
LKRPIYITQ--PPH-----RN----HQEKKEYEERSKTQEFMTTDVGMSITIQAGLGVRF
-------------PDPKKRLRQVCSSPYVYWADLPVTSWIKQ-KYLKKWPN--S--VTPN
RLCIYDVETREED--G-------SRDPWLMSFVLDD-EIHFFATQDYIARCGKVNFG---
-------ERLLKRAQEML-------SKIEFRGKNKKT--GEDEIKIKNV--LEGFTITAH
ECATSGHAVVRMFEEIHP-RLPDLMVAWNH-EFDISRMLEALERDNIAPEDVFSHPSVPQ
KYRKVWFKKDQASKKTESKSL----TKAPSQQWHVLYCMASFFFVDAMCLFRSLRVH-EG
QRPSYKLNAILDSEL---------------------------------------------
------------------------------------------------------------
------------------------GLNKLDIPGLP--Y--EEKLEWHLKAQKDFALEYCV
YNIFDNLMILLLDKKTNDLASAISILAGYSMYDIFPSLPKRIC--VAFTYYLYEQNPSLV
IGCTGQAMR----NDYDEEVIGTDGWIVTLTACMNSENGLTNILKEIPQFHSA-FRGQTA
DADLTQAYPSATNMMNQSRETTLIELLSITGVSEEIRRRTGVNLTAGRV---------NA
MEIANDFFCLPDKDKVLTTFLVRQGETV--TDPIEYINGF--------------------
>NC_019929_p227
------------------------------------------------------------
------------------------------------------------------------
---MINNYFAPEDVIAKECKHVAYATDD---EKQNDFVLVKEVIHTKDGRLIPRVFGREN
LKRPIYITQ--PPH-----RN----HQEKKEYEERSKTQEFMTTDVGMSITIQAGLGVRF
-------------PDPKKRLRQVCSSPYVYWADLPVTSWIKQ-KYLKKWPN--S--VTPN
RLCIYDVETREED--G-------SRDPWLMSFVLDD-EIHFFATQDYIARCGKVNFG---
-------ERLLKRAQEML-------SKIEFRGKNKKT--GEDEIKIKNV--LEGFTITAH
ECATSGHAVVRMFEEIHP-RLPDLMVAWNH-EFDISRMLEALERDNIAPEDVFSHPSVPQ
KYRKVWFKKDQASKKTESKSL----TKAPSQQWHVLYCMASFFFVDAMCLFRSLRVH-EG
QRPSYKLNAILDSEL---------------------------------------------
------------------------------------------------------------
------------------------GLNKLDIPGLP--Y--EEKLEWHLKAQKDFALEYCV
YNIFDNLMILLLDKKTNDLASAISILAGYSMYDIFPSLPKRIC--VAFTYYLYEQNPSLV
IGCTGQAMR----NDYDEEVIGTDGWIVTLTACMNSENGLTNILKEIPQFHSA-FRGQTA
DADLTQAYPSATNMMNQSRETTLIELLSITGVSEEIRRRTGVNLTAGRV---------NA
MEIANDFFCLPDKDKVLTTFLVRQGETV--TDPIEYINGF--------------------
>NC_021531_p45
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------------MREN
VKRPIFVTREGPSF-----RN----HQEKKEFELREKCVEYHTTDVKMSQTIQMALGHNF
-------------PNPKLSLKMACRSPFVYWADLPVTSWIKQ-KYKEKYPN--A--QSLN
RSCVFDVETKEDD--G-------SKRMEMVSFVCDK-EIHFFAHAEYFDRIKG--GH---
-------EAIEKKTIELL-------SRVPFTKNKKGKKLPKGQIEYRDLIKENGYELFVH
RCATPAQCIVAMFHEVHR-LLPDLLVAWNI-DYDLTIMMKELDAEGIPYEDVFCHPDVPH
KYRNVWYKRDQASKKTESKTL----TKSPADQWHVLYCQASFYAVDAMCLFKKIRTH-EG
NRPTYRLSAILETEV---------------------------------------------
------------------------------------------------------------
------------------------GVGKLDIPGLE--Y--KDNVDWHIQAQRDFPLEYCA
YNIMDNLLIVLLDEQTNDLSSALTILSGVSMYDIFPSLPKRIC--NEFTYFLWEQ--GLV
IGSVGNAIK----NDFDEEVIGTDGWIVTLPAHMNAENGLH-VVKEVPSLLTA-FRGQTA
DADLTQAYPSCTNMANQSRETTIIELISIEGVSEEVRRRAGVNLTAGRV---------NA
MEIANELFLMPDKDVVLEAFLKRMNAAN--EEVVTTIDEEAA------------------
>MG655269_p288
------------------------------------------------------------
------------------------------------------------------------
---------MSSNNLRFECKHAIYTLSL---RGKSDIIFVKENVIDENGNSKPHTRIIKD
MKRDYYLTK--PAY-----RN----HQDKKDYEELSKLQKFSCPQWDLPNHISKMLGKG-
--------------ATDQQLRRVCRSPYVYGADIEPSSIVKA-MYEAKFPD--T--FTPY
KISVFDIETEMVD--ERY-----KGEPIMASLTFKE-RTFTFVIRRYFGGEAD-------
-------ERIHQKLKLAWDKYLG-------------------DWATK----RSITNPEFV
LVDSAADGFVKLFERAHE-WMPDFITGWNVLEFDYKVLTQTLTNAGINPADVICDPSVPQ
EYRNVYYYEGKTHKVKNDGKEVTKTSLANYEKWPYVNAPASFRWAESMSAYYYLRTM-NG
KELNYKLDNIAEKVL---------------------------------------------
------------------------------------------------------------
------------------------GVTKMKFSEAE--G--YHGADWHEFMQSNYKYEYVM
YNIFDCIVVEMMDEKTSDLSVAVPTFCGVSDYRNFISQPTRIA--EAMHYDVMKE--GYI
WGTTSDQMR----TELDDHIQGLGGWIVMLPTELVALNGKA-MFKELPNVKSY-VRTGTN
DIDVEGAYPTGTVIMNVGKQTTWIEMTQIEGLDDTEYRQVAVNLAAGGM--------NNA
GELARKLYKAPETITLLKDFMVEKHIEIDFMAAA--------------------------
>NC_031010_p49
------------------------------------------------------------
------------------------------------------------------------
--MEQNQYYSPSDIAGRECKNITYATDE---EKENDCVLVKEVIHTNDGRQIPAIRIAEN
VKRPIYITL--PQH-----RN----HQEKKEYEERGKCQEFMTTDVNMAATIQLGLGYRF
-------------VDKKKSLRQVCSSPFVYWADLTLPTYIKN-QYLKKWSQ--F--VSEN
RICVIDVETNVRE--GR------DREPNIMSFVLDD-EIHFFGDKPYMDRIGK-DAD---
-------QIIAKKAKELL-------TRVPFLEKDKAT--GEEKWVEKDV--LGDYQLFVY
TCATPGACIVSMFQKIHE-RLPDLVVAWNH-QFDHNCIVNQLAAEGIPAEDVYCHPDVPV
KYRRCWFKEDQANKKTESKSL----TKSPADQWHVMYCMASFYCVDAMCLFKKIRTH-EG
NRPNYKLSSILETEI---------------------------------------------
------------------------------------------------------------
------------------------GVGKLSIPGLD--Y--EDKLSWHDKAQRDFPAEYAV
YNIMDNLLIILLDHKTKDLASAFSVLAGVSMFDIFPSLPKRIC--NAYTFYLYDQ--GLV
IGATGKEMR----NEKDEEVIGTDGWIVTLPAHMNQENGLRNILAEISDFHSA-FRGQTA
DADLTQAYPSATNMLNQSRETTLIELIYVDGVTEEVRRRVGVNLTAGRI---------NA
MEIATDFFLLPDKDTVLETFMKRMADNA--EHTTH-------------------------
>NC_016571_p99
------------------------------------------------------------
------------------------------------------------------------
-----MTDKIEDPIVGRVCKHAYLSFNKF--SGGNDLLTAKVTDIHQSGKRTDRLVQIEN
YKRDFYIVK--KKY-----QG----FKDKRDYIEANKCDKHSTNESRLAEQISKCLFGR-
-------------PDRKAQISDMKNNPYVFGCQESVPVIYKQ-KYYERFPDHQP--AEAF
KVAAYDVETYIMK--DGS-----VGPINMASTTMKE-QAYWSGLRSYFPEEDQ-KDD---
-------AIIIRKLNEC-----------------------AA-IHLKDYMDKHGVTIQWE
LANTPGQVVYNNVQAWHR-MSMDFVVSWNA-NFDMEQNEKALENEGYNLAETYSDPSIPK
PYQDYYYFKGREFKRKVDGSQS---PLEPQERFPVVQAPARWQWFDGMSFYAIKRAP-MG
KKESYSLQNTAKAEK---------------------------------------------
------------------------------------------------------------
------------------------VEGKLYIPEAE--HLQPGSVEWHKFMVANYPYEYVM
YNIRDNWVIEDLNRATNDYSLSLPSLVTSSELKSYQSQPSMIS--DKLSFIALKE--GYV
WGTVGRKKE----DLWKEIKPDLRDWIALLHAELNEDKGKA-IYAGLPSWRSR-GRGDTD
DIDVTGAYPHITVSLNVSNKTTKMEVCEIEGLDRFEFRRVGVNYASSPI--------ANA
VTLCNTIYGMPQLTEINSFYEESVIPFIEQMKKA-A------------------------
>NC_004629_p82
------------------------------------------------------------
------------------------------------------------------------
-MSNEQQVTNKKKIKGIEAKHITYCTDQF--GKFTDAHFVKERIHFEDGTTANNLRMWEN
YQRPFWITA--KGM-----RN----HKEKKDYEYERNLVKYMSTQIDMKRKISKILGDYS
----------------ARSLRQLARSPYLYGSDVSSTCYLKH-DYQERYPG--L--ISLN
TVAGGDIETNVY--EAEN-----DGQIICMSVTHKN-KAFLAYLKRWVSDIED-PVK---
-------ETLEQA---------------------------QKEEVLSHLIKERGLDIEVM
VVETPVDIIIECFKRLHT-WKPDFFAFWNI-SFDIGRILKTLEHYGVNPADIFSDPSVPK
NYRYFHFKIDEPMTTTASGVTK---SKGPEDQWHWITAPASFQCIDSMSTYRVTRLA-KG
RDPNYRLESILRKELNIDKSTTIKNDKDLEDFIEGFNKQLVDRPGGVITKYIKN------
--------------------------------------------------------IGSN
EWIRVDDFILNDNFTYGDSIRYMMEFGKLTFEETM--H--LGGIDWHREMQTKHKIKYGL
YNIIDSIRLEQLDEQVNDLGRSISLFSKASDYKNFSSNPKRLC--DDMHFWYLNRPDPCV
IGSSSDQMV----HELDQYVIGHNDWIVTLPSYMAGPNGLQ-CVKDLPNYKTL-IFCHIA
DLDIVSTYPNVSQILNIARETCVMEFSMMEGISEHHRREVGVNLTGGRV---------NA
IEITQKIMGAPKMDTLLEKFINTHKNPK--------------------------------
>NC_031120_p47
------------------------------------------------------------
------------------------------------------------------------
--MESNRYYAPEDVIAKECKNVAYATDD---EKQNDFVLVKEVIHTKDGRFIPRILMLEN
VRRPVYITR--KEF-----RN----HKEKKEYEKKGNCQEVWTTDVNMGNAIQMALGASF
-------------PDPRKKLKQICTSPFVYWADLPVTSYIKE-KYMSKWKD--R--ATPN
RICVYDVETREED--K-------SRDPWLMSFVLDD-EIHFFCTSDYAARMGK-NWQ---
-------DRLVTKAQQML-------SKIQFREKNKVT--DEVEVKEKNV--IEGYKIFTY
ECANSGLCVQRMFEEIHP-RLPDLMVAWNH-EFDINRMMEALDRSGIRPEDVFCHPDVPE
KYRRVWFKEDKASKKTESKSL----TKAPSQQWHVLYCMASFYFVDAMVLFRSLRVH-EG
QRPSYKLNAILDSEI---------------------------------------------
------------------------------------------------------------
------------------------GLNKLDIPGLP--Y--EEKLEWHLKAQRDYALEYCV
YNIFDNLMIVLLDKKTNDLSSAISILAGYSMYDIFPSLPKRIC--VAFTYYLYAQ--DLV
IGSVGSAMR----NDFDDEVIGTDGWIVTLTACMNAENGLD-VLKELPTFYSA-FRGQAA
DADLTQAYPSATNMMNQSRETTIIELLSISGVPESVRRAAGVNLTAGKV---------NA
MDIACSLFQLPEKDTVLDAFNKRVAN-E--EPPVEYVSGF--------------------
>KU886225_p291
------------------------------------------------------------
------------------------------------------------------------
---------MSSNNLRFECKHAIYTLSL---RGKSDIIFVKENVIDENGNSKPHTRIIKD
MKRDYYLTK--PAY-----RN----HQDKKDYEELSKLQKFSCPQWDLPNHISKMLGKG-
--------------ATDQQLRRVCRSPYVYGADIEPSSIVKA-MYEAKFPD--T--FTPY
KISVFDIETEMVD--ERY-----KGEPIMASLTFKE-RTFTFVIRRYFGGEAD-------
-------ERIHQKLKLAWDKYLG-------------------EWATK----RSITNPEFV
LVDSAADGFVKLFERAHE-WMPDFITGWNVLEFDYKVLTQTLTNAGINPADVICDPSVPQ
EYRNVYYYEGKTHKVKNDGKEVTKTSLANYEKWPYVNAPASFRWAESMSAYYYLRTM-NG
KELNYKLDNIAEKVL---------------------------------------------
------------------------------------------------------------
------------------------GVTKMKFSEAE--G--YHGADWHEFMQSNYKYEYVM
YNIFDCIVVEMMDEKTSDLSVAVPTFCGVSDYRNFISQPTRIA--EAMHYDVMKE--GYI
WGTTSDQMR----TELDDHIQGLGGWIVMLPTELVALNGKA-MFKELPNVKSY-VRTGTN
DIDVEGAYPTGTVIMNVGKQTTWIEMTQIEGLDDTEYRQVAVNLAAGGM--------NNA
GELARKLYKAPETITLLKDFMVEKHIEIDFMAAA--------------------------
>KU886223_p289
------------------------------------------------------------
------------------------------------------------------------
---------MSSNNLRFECKHAIYTLSL---RGKSDIIFVKENVIDENGNSKPHTRIIKD
MKRDYYLTK--PAY-----RN----HQDKKDYEELSKLQKFSCPQWDLPNHISKMLGKG-
--------------ATDQQLRRVCRSPYVYGADIEPSSIVKA-MYEAKFPD--T--FTPY
KISVFDIETEMVD--ERY-----KGEPIMASLTFKE-RTFTFVIRRYFGGEAD-------
-------ERIHQKLKLAWDKYLG-------------------EWATK----RSITNPEFV
LVDSAADGFVKLFERAHE-WMPDFITGWNVLEFDYKVLTQTLTNAGINPADVICDPSVPQ
EYRNVYYYEGKTHKVKNDGKEVTKTSLANYEKWPYVNAPASFRWAESMSAYYYLRTM-NG
KELNYKLDNIAEKVL---------------------------------------------
------------------------------------------------------------
------------------------GVTKMKFSEAE--G--YHGADWHEFMQSNYKYEYVM
YNIFDCIVVEMMDEKTSDLSVAVPTFCGVSDYRNFISQPTRIA--EAMHYDVMKE--GYI
WGTTSDQMR----TELDDHIQGLGGWIVMLPTELVALNGKA-MFKELPNVKSY-VRTGTN
DIDVEGAYPTGTVIMNVGKQTTWIEMTQIEGLDDTEYRQVAVNLAAGGM--------NNA
GELARKLYKAPETITLLKDFMVEKHIEIDFMAAA--------------------------
>MF042360_p128
------------------------------------------------------------
------------------------------------------------------------
---MAKQKINEADIVGIEAKHITYVTDQN--QKRHDLHVVKEVVHLKDKTRVTRLRLEED
YIRHYYITH--KGQ-----AN----HSEKKDYEYMRNLKKYSTTQIELEHSIQKSLRGYE
TPDG-----QKVEWSPRPRLRQLSRMPYVYGADVNSTCCLKN-EYREQYPD--L--NSRN
TVAGGDIETNVY--QEGK-----DGEIICMSVSHKD-KVYLAYLRRWVDDIKD-PIA---
-------ETHAEL---------------------------ERIPELVTLKKARNLNIEVE
VLETPAQIVIECLKRLHE-WQPDFFSFWNM-DFDMSRMLKNLEQHGIDPKNVFSDPSIPG
NYKYFHYKQDNAMSTTASGVTK---SKGPEDQWHWVTAPASFQCIDALSTYRVTRLA-KG
KEPSYALDYILKKELSVDDEEEIITQDDLNEFLKSCNKKMEERSGSHPYWSVSNPADDII
TKTMIPGENEG--------------------------------------DPELEHIDREP
VWKEVPALVFGETVHSTFKVKMVLNFGKLKFPETD--H--LTGIEWHIEMQKNHKIRYGL
YNIIDSIRLEQLDERTNDLARSITLYSKNSDYKNFNSNPKRLC--DDMHFWYMKRPEPSV
IGTSSDQMI----HELDQYVVGHDGWIVTLPSYMAGPNGIK-CVKEFPDYRSL-IWTHVA
DLDIVSTYPNVSQILNIARETVVMEFSAIWGISEHHRREVGVNLTGCRT---------NA
LEIAQKIFKAPKLDVLLESYLKQRQGTIQELPAPK-------------------------
>MG655268_p287
------------------------------------------------------------
------------------------------------------------------------
---------MSSNNLRFECKHAIYTLSL---RGKSDIIFVKENVIDENGNSKPHTRIIKD
MKRDYYLTK--PAY-----RN----HQDKKDYEELSKLQKFSCPQWDLPNHISKMLGKG-
--------------ATDQQLRRVCRSPYVYGADIEPSSIVKA-MYEAKFPD--T--FTPY
KISVFDIETEMVD--ERY-----KGEPIMASLTFKE-RTFTFVIRRYFGGEAD-------
-------ERIHQKLKLAWDKYLG-------------------EWATK----RSITNPEFV
LVDSAADGFVKLFERAHE-WMPDFITGWNVLEFDYKVLTQTLTNAGINPADVICDPSVPQ
EYRNVYYYEGKTHKVKNDGKEVTKTSLANYEKWPYVNAPASFRWAESMSAYYYLRTM-NG
KELNYKLDNIAEKVL---------------------------------------------
------------------------------------------------------------
------------------------GVTKMKFSEAE--G--YHGADWHEFMQSNYKYEYVM
YNIFDCIVVEMMDEKTSDLSVAVPTFCGVSDYRNFISQPTRIA--EAMHYDVMKE--GYI
WGTTSDQMR----TELDDHIQGLGGWIVMLPTELVALNGKA-MFKELPNVKSY-VRTGTN
DIDVEGAYPTGTVIMNVGKQTTWIEMTQIEGLDDTEYRQVAVNLAAGGM--------NNA
GELARKLYKAPETITLLKDFMVEKHIEIDFMAAA--------------------------
>KX397370_p51
------------------------------------------------------------
------------------------------------------------------------
--METNMYFSPDDVIAKECKHVAYATDE---SGENDLVLIKEVIHTKDGRLIPRIQLREN
VKRPVYVTQ--EPY-----RN----HKEKKEFELKSRCQELLTTDALMAKTLQMGLGARF
-------------PDPKKRLRQVCTSPFVYLADLPVTSWIKQ-KYMAKYKD--C--TTPN
RICVYDVETREED--K-------SRDPWIMSFVLDD-EIHMFCTKDYVARIGK-NWD---
-------NRLVAKAQELL-------SKIEFREKNKKT--GETEVKVKNV--IADYKIFTY
ECLDSAQCIVRMFEEIHP-RLPDLLVAWNH-EFDITRMMEALERGCIEPEDVFCHPDVPR
QYRKVWFKKDLASKKTESKSL----TKAPSQQWHVLYCMASFFCVDAMVLFRSLRVH-EG
QRPSYKLNAILDSEL---------------------------------------------
------------------------------------------------------------
------------------------GLNKLDIPGLP--Y--EEKLDWHLKAQREFPLEYCV
YNIFDNLMIVLLDKKTNDLSSAITILAGYSMYDIFPSLPKRIC--IAFTYYLLAQ--GYV
AGSVGAEMR----NNYDEEVIGTDGWIVTLTACMNAENGLD-VLKELPQFYSA-FRGQTA
DADLTQAYPSATNMMNQSRETTIFELLFINGVSEEVRRRTGVNLTAGRV---------NA
MDIANTFFLLPDKDDVLEVFNRRVAN-S--EPAEEYAQGF--------------------
>NC_031126_p49
------------------------------------------------------------
------------------------------------------------------------
--MESNLYYAPEDVIAKECKHVAYATDD---DKENDFVLVKEVIHTKDGRFIPRLIGREN
VRRPVYITR--KEF-----RN----HKEKKEYEKKGNCQEIWTTDANMGNAIQMGLGASF
-------------PDPRKKLRQICTSPFVYWADLPVTTYIKQ-KYMARWKD--K--VTPN
RICVYDVETREED--K-------SRDPWLMSFVLDD-EIHFFCTKDYAMRMGK-NWE---
-------ERLIVKAKEML-------SKIQFREKNKLT--DQVEVKEKNV--IEGYKIFTY
ECLNSGLCVQRMFEEIHE-RLPDLMAAWNH-EFDISRMMEALDRAGIRPEDVFCHPSVPE
KYRRVWFKKDQASKKTESKSL----TKAPSQQWHVLYCMASFYCVDAMVLFRSLRVH-EG
QRPSYKLNAILDSEI---------------------------------------------
------------------------------------------------------------
------------------------GLNKLDIPGLP--Y--EEKLEWHLKAQRDYALEYCV
YNIFDNLMIVLLDKKTNDMSSAISILAGYSMYDIFPSLPKRIC--VAFTYYLYAQ--DLV
IGSVGSAMR----NDFDDEVIGTDGWIVTLTACMNAENGLD-VLKELPTFYSA-FRGQAA
DADLTQAYPSATNMMNQSRETTIIELLAITGVPEHVRRAAGVNLTAGKV---------NA
MDIACSLFLLPGKDEVLDAFNKRVAN-E--EPPTEYVSGF--------------------
>KU726251_p44
------------------------------------------------------------
------------------------------------------------------------
--MEINTYYAPEDVIAKECKHVAYATDE---EKENDFVLIKEVIHTKDGRLIPRLVMREN
LKRPVYVTR--EEY-----RN----HQEKKEFEEKGKCQELWTTDAQMAKTLQMGLGARF
-------------PDPKKNLRRVCTSPYVYWADLPITSWIKQ-KYLKRWPN--N--ISPN
RLCVYDVETNEMD--G-------TKEPWIVSFILDD-EIHFFGAKNYMDRIGK-NAE---
-------EVILKKAQELL-------SKIEFDEKDKKT--GEKVTKTKDI--ISGYKIFTY
TCATAGQCIVRMFEEIHP-RLPDLLVAWNH-QFDISRMLETLQKEGIDPLGVFNHPDVPE
KYRRLWFKEDQANKKTESKSL----TKAPSQQWHVLYCTASFYCVDAMVLFRSLRVH-EG
QRPSYKLSAILYTEL---------------------------------------------
------------------------------------------------------------
------------------------GLHKLDIPGLP--Y--EDNLQWHIKAQRDYPAEYAV
YNMMDNLLIVLLDKKTNDLSSAISILAGFSMYDIFPSLPKRIC--VAFTYYLYDK--GYV
IGSVGSAMR----NDYDEEVIGTDGWIVTLTACMNAENGLNNILEEIDEYYSA-FRGQTA
DADLTQAYPSATNMMNQSRETTLIELLSINGVSEEIRRRTGVNLTAGRV---------NA
MEIATDFFCLPDKDTVLSTFLRKQGEVV--TEPMEYICGF--------------------
>MG720308_p95
------------------------------------------------------------
------------------------------------------------------------
MDYSYTPPSSESPVKGKVCKHAVYVPSKR--DPLKDMTFIKQTTIHENGDRTNQFLKVAD
YVRDFYIVK--EKY-----RK----FNQKKDYIDKRLVKKYRSTQARLAMSIKRVLYGI-
-------------NDRGADLLMVKSNPYVFGCESSVPVLIKR-KYFERYPDYQE--TEPA
TLAAYDVETDMVN---GD-----GEDVIMASTTMKE-KIFFSVVRSFFEGMKD-------
-------EDILKGLKEA-----------------------EEELIGERLRKR-NAEVHYN
LVDDQAECVENNIKVWHM-WEPDFISSWNA-SYDMQRNEHALIMGGRDLEEVYTDPSIPR
EFRYYKYDKGRTHKRKENGDSQ---PLEWQEQFPTVRAAAKWQWLDGASFYAIKNAP-KG
KKESYSLEYTAQDNG---------------------------------------------
------------------------------------------------------------
------------------------IEGKLYTDKGS--HLTQGKGAWHRWMQKYAKFEYCM
YNISDNLVIEEMDEKTNDVALNLPLLLKSTEFFDYPSQPKCIS--NELSFIAEEA--GYI
WGTKGRGSKDDPDKKLDVHKPTLGDWIALLETEKNADNGKA-VFIGMPGIRSR-GRGLTD
DIDVEGAYPTATVALNISNKTTKIEACAIQGLNPLQFREVGVNYASSPK--------ANA
VSLCTTLHRFPSYEEMDELFPELYEEEFGEPLPM-AA-----------------------
>AP017972_p102
------------------------------------------------------------
------------------------------------------------------------
------------------------------------MTFIKQTTIHESGERTNQFLKVAD
YVRSFYIVR--EKF-----RK----FDQKKDYIDKRLVKEYKSTQARLAMNIKRVLHGI-
-------------NDRNADLMMLKNNPYVFGCETPVPVLIKH-KYFERYEEFQE--TEPS
TLAAYDVETDMVN---GN-----GEDVIMASTTMKE-KIFFSVVRSFFDGMSD-------
-------EDILKGLKES-----------------------EEALIGERLKRR-NATVHYN
LVDTQTECVENNIKVWHM-WEPDFISSWNA-SYDMQRNEHALILGNRDLEEVYSDPSIPQ
EFRYYKYDKGRTHKRKENGDSQ---PLEWQEQYPTVRAAAKWQWLDGASFYAIKNAP-KG
KKESYSLEYTAQDNG---------------------------------------------
------------------------------------------------------------
------------------------IEGKLYTDKGA--HLTQGKGAWHRWMQKHAKFEYCM
YNISDNLVIEEMDEKTNDVALNLPLLLKSTEFFDYPSQPKCIS--NELSFIAAEH--GYI
WGTKGRGGKD----ELDKHKPTLGDWIALLETEKNADNGKA-IFIGMPHIRSR-GRGLTD
DVDVEGAYPTATVALNVSNKTTRIEACAIQGLNPLEFREVGVNYASSPK--------ANA
VSLCKTLHRFPGFEEMDEVFPELFEQEFGTPLPM-AA-----------------------
>MF805716_p270
------------------------------------------------------------
------------------------------------------------------------
-MSNEQQVTNKKKIKGIEAKHITYCTDQF--GKFTDAHFVKERIHFEDGTTANNLRMWEN
YQRPFWITA--KGM-----RN----HKEKKDYEYERNLVKYMSTQIDMKRKISKILGDYS
----------------ARSLRQLARSPYLYGSDVSSTCYLKH-DYQERYPG--L--ISLN
TVAGGDIETNVY--EAEN-----DGQIICMSVTHKN-KAFLAYLKRWVSDIED-PVK---
-------ETLEQA---------------------------QKEEVLSHLIKERGLDIEVM
VVETPVDIIIECFKRLHT-WKPDFFAFWNI-SFDIGRILKTLEHYGVNPADIFSDPSVPK
NYRYFHFKIDEPMTTTASGVTK---SKGPEDQWHWITAPASFQCIDSMSTYRVTRLA-KG
RDPNYRLESILRKELNIDKSTTIKNDKDLEDFIEGFNKQLVDRPGGVITKYIKN------
--------------------------------------------------------VGSN
EWVPVDDFILNDNFTYGDSIRYVMEFGKLTFKETA--H--LGGIDWHREMQTKHKIKYGL
YNIIDSIRLEQLDEQVNDLGRSISLFSKASDYKNFSSNPKRLC--DDMHFWYLNRPEPCV
IGSSSDQMV----HELDQYVIGHNDWIVTLPSYMAGPNGLQ-CVKDLPNYKTL-IFCHIA
DLDIVSTYPNVSQILNIARETCVMEFSMMEGISEHHRREVGVNLTGGRV---------NA
IEITQKIMGAPKMDTLLEKFINTYKNPK--------------------------------
>KU521356_p108
------------------------------------------------------------
------------------------------------------------------------
-MSNEQQVTNKKKIKGIEAKHITYCTDQF--GKFTDAHFVKERIHFEDGTTANNLRMWEN
YQRPFWITA--KGM-----RN----HKEKKDYEYERNLVKYMSTQIDMKRKISKILGDYS
----------------ARSLRQLARSPYLYGSDVSSTCYLKH-DYQERYPG--L--ISLN
TVAGGDIETNVY--EAEN-----DGQIICMSVTHKN-KAFLAYLKRWVSDIED-PVK---
-------ETLEQA---------------------------QKEEVLSHLIKERGLDIEVM
VVETPVDIIIECFKRLHT-WKPDFFAFWNI-SFDIGRILKTLEHYGVNPADVFSDPSVPK
NYRYFHFKIDEPMTTTASGVTK---SKGPEDQWHWITAPSSFQCIDSMSTYRVTRLA-KG
RDPNYRLESILRKELNIDKSTTIKNDKDLEDFIEGFNKQLVDRPGGVITKYIKN------
--------------------------------------------------------VGSN
EWVPVDDFILNDNFTYGDSIRYVMEFGKLTFKETA--H--LGGIDWHREMQTKHKIKYGL
YNIIDSIRLEQLDEQVNDLGRSISLFSKASDYKNFSSNPKRLC--DDMHFWYLNRPEPCV
IGSSSDQMV----HELDQYVIGHNDWIVTLPSYMAGPNGLQ-CVKDLPNYKTL-IFCHIA
DLDIVSTYPNVSQILNIARETCVMEFSMMEGISEHHRREVGVNLTGGRV---------NA
IEITQKIMGAPKMDTLLEKFINTYKNPK--------------------------------
>NC_028950_p179
--------------------------------------MKDPSDEERERVVDSYRRYFEK
EYEAGGALTKRVHELTDLVRSGKRIGLRCWCHPKRCHGNIIISKIKELLEGNMTESPQQP
SKEFLNYPFAKEDIDYVECRFAIHIPKDKHNDKSIDLHAVKEIIHFKDGTTKPWVKYIPN
YQCKFWTTK--PHV-----RNGRFAHKQKKEWESLDNLIEGQATASGMGFAVARALDQM-
--------------RLADRIFDLKDSPFVYGLDIPSTVQLKH-DYTVRMQGK-A--DTPF
TIAYSDTETNMLGIEEGA-----SKHIIMQSLFHEDGRLFTVILEDFVKTLPN--PQ---
-------KDLRALYDEHMP----------------------------QQGKDLVKDWEIA
IVKEPIDIVKAILQRCHT-WQPDFLSFWNM-IFDLDKMIQCVEDAGYRPEDIFCDPRLPR
ELRYAFLKRANPSKTSASGRLM---TKKPADQWHSWLCPASFYIIDQMATYRFVRKS-KQ
LEKSYGLDDILGKELE--------------------------------------------
------------------------------------------------------------
------------------------GLGKLKHKPAE--G--LTKAEFHIFMQQKYPGEYVI
YHIWDAVCMHLLTLKTKDLSFSLPGTTEFSDFVSFESEPKRYI--HKFHFYALEN-HRCV
TGVSSKALV----QEYDDMTISTKGHIVTLEPHLTVDSGMK-IFNDYPELQTN-FYGHNA
DLDVKSSYPYGQWVFNMSRQTTVRELVEIEGVRDHTRRIQGLNISGGRS---------NA
VEFCTEIFGLPTLAELDKIYDQAHA-----------------------------------
>NC_031127_p52
------------------------------------------------------------
------------------------------------------------------------
--METNMYFSPDDVIAKECKHVAYATDE---SGENDLVLIKEVIHTKDGRLIPRIQLREN
VKRPVYVTQ--EPY-----RN----HKEKKEFELKSRCQELLTTDALMAKTLQMGLGARF
-------------PDPKKRLRQVCTSPFVYLADLPVTSWIKQ-KYMAKYKD--C--TTPN
RICVYDVETREED--K-------SRDPWIMSFVLDD-EIHMFCTKDYVARIGK-NWD---
-------NRLVAKAQELL-------SKIEFREKNKKT--GETEVKVKNV--IADYKIFTY
ECLDSAQCIVRMFEEIHP-RLPDLLVAWNH-EFDITRMMEALERGCIEPEDVFCHPDVPR
QYRKVWFKKDLASKKTESKSL----TKAPSQQWHVLYCMASFFCVDAMVLFRSLRVH-EG
QRPSYKLNAILDSEL---------------------------------------------
------------------------------------------------------------
------------------------GLNKLDIPGLP--Y--EEKLDWHLKAQREFPLEYCV
YNIFDNLMIVLLDKKTNDLSSAITILAGYSMYDIFPSLPKRIC--IAFTYYLLAQ--GYV
AGSVGAEMR----NNYDEEVIGTDGWIVTLTACMNAENGLD-VLKELPQFYSA-FRGQTA
DADLTQAYPSATNMMNQSRETTIFELLFINGVSEEVRRRTGVNLTAGRV---------NA
MDIANTFFLLPDKDDVLEVFNRRVAN-S--EPAEEYAQGF--------------------
>KU886222_p288
------------------------------------------------------------
------------------------------------------------------------
---------MSSNNLRFECKHAIYTLSL---RGKSDIIFVKENVIDENGNSKPHTRIIKD
MKRDYYLTK--PAY-----RN----HQDKKDYEELSKLQKFSCPQWDLPNHISKMLGKG-
--------------ATDQQLRRVCRSPYVYGADIEPSSIVKA-MYEAKFPD--T--FTPY
KISVFDIETEMVD--ERY-----KGEPIMASLTFKE-RTFTFVIRRYFGGEAD-------
-------ERIHQKLKLAWDKYLG-------------------EWATK----RSITNPEFV
LVDSAADGFVKLFERAHE-WMPDFITGWNVLEFDYKVLTQTLTNAGINPADVICDPSVPQ
EYRNVYYYEGKTHKVKNDGKEVTKTSLANYEKWPYVNAPASFRWAESMSAYYYLRTM-NG
KELNYKLDNIAEKVL---------------------------------------------
------------------------------------------------------------
------------------------GVTKMKFSEAE--G--YHGADWHEFMQSNYKYEYVM
YNIFDCIVVEMMDEKTSDLSVAVPTFCGASDYRNFISQPTRIA--EAMHYDVMKE--GYI
WGTTSDQMR----TELDDHIQGLGGWIVMLPTELVALNGKA-MFKELPNVKSY-VRTGTN
DIDVEGAYPTGTVIMNVGKQTTWIEMTQIEGLDDTEYRQVAVNLAAGGM--------NNA
GELARKLYKAPETITLLKDFMVEKHIEIDFMAAA--------------------------
>AP017925_p248
------------------------------------------------------------
------------------------------------------------------------
-MSTKKPNFSPEDISGVECRHVVFIPPIK--DSKDDYHLIKEVIHLKDGQRVPNVRIVRN
YKRKFWITK--EGY-----RR----HKQKKEWEDISKLKEYECTQSELVEKAAKALGMF-
--------------KPPRSLKQLSRSPYLYGSDILSTSVIKQEVYRNRWPE--L--NTPS
SSAASDTETDMVQ--G-------HGRIIMQTISMKE-KVYTAVVRDFLRGVGG--TD---
-------ADKIKLCQEALIKYLDIDEPVLKKDGTPEIDKKTGKPKVTNVYRDRKLEWEIE
LVENDGMVVYNTLKKAHE-WQPDFMTFWNM-DFDIKKMEESLKFHKIPLADAWSDPAVAP
AYRFYEYKEGQSQKVTASGKVT---PIAPHARWHTVITPASFYVMDAMCAYKQVRTG-KQ
EERAYTLEFILNKHL---------------------------------------------
------------------------------------------------------------
------------------------KRGKLKFTAAD--G--LAKADWHVFMQKKHPIEYIV
YNVFDCVGLEMLDEKTKDLSVSVPSGAAMSDYSRFNSQPRRVV--DKLHYFVQAR--GKI
IGTTSDEMA----TDFDQETISLKNWIVMLPAHLVADNGLK-IIKEYPDICSN-LRLHIG
DLDVSASYPNGESVFNISKETTKKELISIEGVSENVRRMQGINLSAGAT---------NA
VEFCTGMFHMPQMTQWLEAYRRQDDLVQVAMDLRDWVDDSAATADAVISMREDEDENEYA
>MF063068_p83
------------------------------------------------------------
------------------------------------------------------------
-------MSTIVKPTGFEAKHITYVVDQE--KGTNDMLVIKEVVHLDDGRRVPRLRLEEN
YKRPFWITH--KGR-----RN----HKEKKDYELASNLQEYSSTQLDLVHNIARTLNIN-
-------------PGFRPQQRVIQREPYVYGADVNSACCKKA-EYRTKYPD--T--ISFN
TVAGGDIETDVIGIDGGP-----KDDIICMSVSHKD-QVRLVYLKRWIADIDD-PVG---
-------ETQREA-----------------------------ERLIPSLIAERKLNIEVL
IADTPAQVVMRCIEKLHE-WKPDWFAFWNM-DFDISKIIRALQNEGIDPAIVFSDPTIPA
KYKFFDYRKGNTQKTTASGKVM---SINVEDRWNWVTHPATFQCIDAMTVYRITRLA-NG
KDPSYALDAILKKELNDSYDTVIKHPGDIQAFLDRAND-MTKNKGGFIYYYVNEEF----
------------------------------------------------------------
----VGQTITHDQIKIGDEVEVKLDFGKLKIPETD--Q--YTGLRWHEVMQKDFKIVYGV
YNIVDSVRLEQLDEKTKDLASSITMYSKNSDFKNFNSNPKRLT--DDMHFWYLNRPNKSV
IGTASDQMS----HELDRFVIGHDDWIVTLPSYMAAAEGLA-CVAEMQSYLTL-IFTHVA
DLDIVSTYPNVSQILNIARETCVMEFCQIQGITEAIRRELGVNLTGGRV---------NS
VEIAQKVLGAPAFDTMLDAYLAHKAKKQAANQPEFKQVA---------------------
>NC_031043_p47
------------------------------------------------------------
------------------------------------------------------------
--MVSNLHFHPDDVAGKECKSVAYSTDA---EKQNDLVVIKEVVHTKDGRQIPRLVMLEN
VKRPIFITQ--KPF-----QN----HQEKKEYEHRDKCIEIKTTDVKMATAIQMGLGYNF
-------------PNPKTSLKMVCRSPFVYWADLPVTSYIKQ-KYKQKWPE--A--QSLN
RICVFDVETKEDD--G-------SKRMEMVSFVCDN-EIHFFAHDDYMNRVKG--GR---
-------EAIVGKTVELL-------KKVPFTRDKKGKKLPEGQIEYRDII--SDYEIFVH
QCARPADCIVAMFHEVHR-LLPDLLVAWNI-DYDLTIMIKELEAAGIPLEDVFCHPDVPV
KYRNVWYKRDQASKKTESKTL----TKSPADQWHVLYCQASFYAVDAMCLFKKIRTH-EG
NRPTYKLSAILESEV---------------------------------------------
------------------------------------------------------------
------------------------GVGKMDIPGLE--Y--KDNVDWHITAQKEHALEYCA
YNIMDNLLIVLLDQKNNDLASALSVLAGVSMYDIFPSLPKRIC--NEFTYFLHEQ--GLV
IGSVGNAIK----NDFDEEVIGTDGWIVTLPAHMNAENGLY-AVKEVPMLLTA-FRGQTA
DADLTQAYPSCTNMANQSRETTIIELISIEGVSEDVRRRAGVNLTAGRV---------NA
MEIANELFLMPDKDHVLEKFLERMAAAN--DEPVTEVTEAA-------------------
>KX397371_p52
------------------------------------------------------------
------------------------------------------------------------
--METNMYFSPDDVIAKECKHVAYATDE---SGENDLVLIKEVIHTKDGRLIPRIQLREN
VKRPVYVTQ--EPY-----RN----HKEKKEFELKSRCQELLTTDALMAKTLQMGLGARF
-------------PDPKKRLRQVCTSPFVYLADLPVTSWIKQ-KYMAKYKD--C--TTPN
RICVYDVETREED--K-------SRDPWIMSFVLDD-EIHMFCTKDYVARIGK-NWD---
-------TRLVAKAQELL-------SKIEFREKNKKT--GETEVKVKNV--IADYKIFTY
ECLDSAQCIVRMFEEIHP-RLPDLLVAWNH-EFDITRMMEALERGCIEPEDVFCHPDVPR
QYRKVWFKKDLASKKTESKSL----TKAPSQQWHVLYCMASFFCADAMVLFRSLRVH-EG
QRPSYKLNAILDSEL---------------------------------------------
------------------------------------------------------------
------------------------GLNKLDIPGLP--Y--EEKLDWHLKAQREFPLEYCV
YNIFDNLMIVLLDKKTNDLSSAITILAGYSMYDIFPSLPKRIC--IAFTYYLLAQ--GYV
AGSVGAEMR----NNYDEEVIGTDGWIVTLTACMNAENGLD-VLKELPQFYSA-FRGQTA
DADLTQAYPSATNMMNQSRETTIFELLFINGVSEEVRRRTGVNLTAGRV---------NA
MDIANSFFLLPDKDDVLEAFNRRVAN-S--EPAEEYAQGF--------------------
>KU886224_p284
------------------------------------------------------------
------------------------------------------------------------
---------MSSNNLRFECKHAIYTLSL---RGKSDIIFVKENVIDENGNSKPHTRIIKD
MKRDYYLTK--PAY-----RN----HQDKKDYEELSKLQKFSCPQWDLPNHISKMLGKG-
--------------ATDQQLRRVCRSPYVYGADIEPSSIVKA-MYEAKFPD--T--FTPY
KISVFDIETEMVD--ERY-----KGEPIMASLTFKE-RTFTFVIRRYFGGEAD-------
-------ERIHQKLKLAWDKYLG-------------------EWATK----RSITNPEFV
LVDSAADGFVKLFERAHE-WMPDFITGWNVLEFDYKVLTQTLTNAGINPADVICDPSVPQ
EYRNVYYYEGKTHKVKNDGKEVTKTSLANYEKWPYVNAPASFRWAESMSAYYYLRTM-NG
KELNYKLDNIAEKVL---------------------------------------------
------------------------------------------------------------
------------------------GVTKMKFSEAE--G--YHGADWHEFMQSNYKYEYVM
YNIFDCIVVEMMDEKTSDLSVAVPTFCGVSDYRNFISQPTRIA--EAMHYDVMKE--GYI
WGTTSDQMR----TELDDHIQGLGGWIVMLPTELVALNGKA-MFKELPNVKSY-VRTGTN
DIDVEGAYPTGTVIMNVGKQTTWIEMTQIEGLDDTEYRQVAVNLAAGGM--------NNA
GELARKLYKAPETITLLKDFMVEKHIEIDFMAAA--------------------------
>AP017924_p251
------------------------------------------------------------
------------------------------------------------------------
-MSTKKPNFSPEDISGVECRHVVFIPPIK--DSKDDYHLIKEVIHLKDGQRVPNVRIVRN
YKRKFWITK--EGY-----RR----HKQKKEWEDISKLKEYECTQSELVEKAAKALGMF-
--------------KPPRSLKQLSRSPYLYGSDILSTSVIKQEVYRNRWPE--L--NTPS
SSAASDTETDMVQ--G-------HGRIIMQTISMKE-KVYTAVVRDFLRGVGG--TD---
-------ADKIKLCQEALIKYLDIDEPVLKKDGTPEIDKKTGKPKVTNVYRDRKLEWEIE
LVENDGMVVYNTLKKAHE-WQPDFMTFWNM-DFDIKKMEESLKFHKIPLADAWSDPAVAP
AYRFYEYKEGQSQKVTASGKVT---PIAPHARWHTVITPASFYVMDAMCAYKQVRTG-KQ
EERAYTLEFILNKHL---------------------------------------------
------------------------------------------------------------
------------------------KRGKLKFTAAD--G--LAKADWHVFMQKKHPIEYIV
YNVFDCVGLEMLDEKTKDLSVSVPSGAAMSDYSRFNSQPRRVV--DKLHYFVQAR--GKI
IGTTSDEMA----TDFDQETISLKNWIVMLPAHLVADNGLK-IIKEYPDICSN-LRLHIG
DLDVSASYPNGESVFNISKETTKKELISIEGVSENVRRMQGINLSAGAT---------NA
VEFCTGMFHMPQMTQWLEAYRRQDDLVQVAMDLRDWVDDSAATADAVISMREDEDENEYA
>MG655267_p287
------------------------------------------------------------
------------------------------------------------------------
---------MSSNNLRFECKHAIYTLSL---RGKSDIIFVKENVIDENGNSKPHTRIIKD
MKRDYYLTK--PAY-----RN----HQDKKDYEELSKLQKFSCPQWDLPNHISKMLGKG-
--------------ATDQQLRRVCRSPYVYGADIEPSSIVKA-MYEAKFPD--T--FTPY
KISVFDIETEMVD--ERY-----KGEPIMASLTFKE-RTFTFVIRRYFGGEAD-------
-------ERIHQKLKLAWDKYLG-------------------EWATK----RSITNPEFV
LVDSAADGFVKLFERAHE-WMPDFITGWNVLEFDYKVLTQTLTNAGINPADVICDPSVPQ
EYRNVYYYEGKTHKVKNDGKEVTKTSLANYEKWPYVNAPASFRWAESMSAYYYLRTM-NG
KELNYKLDNIAEKVL---------------------------------------------
------------------------------------------------------------
------------------------GVTKMKFSEAE--G--YHGADWHEFMQSNYKYEYVM
YNIFDCIVVEMMDEKTSDLSVAVPTFCGVSDYRNFISQPTRIA--EAMHYDVMKE--GYI
WGTTSDQMR----TELDDHIQGLGGWIVMLPTELVALNGKA-MFKELPNVKSY-VRTGTN
DIDVEGAYPTGTVIMNVGKQTTWIEMTQIEGLDDTEYRQVAVNLAAGGM--------NNA
GELARKLYKAPETITLLKDFMVEKHIEIDFMAAA--------------------------
>NC_023610_p236
------------------------------------------------------------
------------------------------------------------------------
-----MTEVAKPKLLGREFKHATKVNSKF--NDHDEAIFVKEIEHWDNGVRIPKIRMIKN
FERTFYVTR--DKF-----RT----HKEKRSWEDKDKLREYRCTEREMPLAIVKALGYGR
----------------PSSIKQLNRSPYLYGTDINSTTIIKR-EYDRKWGE--Y--KSDY
LTAHLDIERDVTF--G-------TEAIQMISISCGN-EVFQVITEHYMAGDTE--FL---
-------DKVRKCYDAEIPPIFEELAAA---------RDEDGKPKFFKGKVHEPFNIILK
TAKTEAEAVILAFDYLHE-KKPDILSIWNL-PYDLEKMCIALKRENIEPEDVFCDPKIPK
EYRYFRFQEGSARILDANGEGA---NKEPQDRWHRVNCPSHFFWADQMCVRRAIRKH-LP
KEGGYGLGAVLMRVF---------------------------------------------
------------------------------------------------------------
------------------------GFGKLKGDAGK--N-RSTGIDWHRQMQRNEKVFYCV
YNMFDNIGAQLLDEYTLDLRNTFPAQCGWSDMSNYGSQGKKLY--DDQYFKLLER-ENTV
ICGISDQMQ----NEMDDLLVTLEGWICTLSSHLIDRGMGNKVIKEFPDILTK-VIKWVL
DIDVKSSYPSTGVWMNLEQQTIIRQMCKILGITMEEQRRLGINLPAGAV---------NA
VNIMTTICNAPSQETMLHRFAKARGITLEY------------------------------
>NC_007623_p51
------------------------------------------------------------
------------------------------------------------------------
------MVENTSPIVAKVCKHSNYSVSRF--NRGSDLTCVKITNIHEDGGRSQSFISIKD
YKQPYYIVK--ENK-----RK----YKQHKDYIEESWCREYKAPRAQIAFNVIKQLYGR-
-------------ADYKASLAEAKESPYVFGLDQTPPVHIKH-QFFKKYGEHQE--KEPF
TVAAYDVETDMD----AP-----GNPIMMASVTMKR-KAYFAAVRSWFKEPDD-------
-------ATILKHLKDA-----------------------EGKWLSEHLKRR-QCVVQYE
LFDTPGQVVVACINKMHE-WQPDWVASWNA-EYDMTKNEEALRNEGYRLEDVYCDPSIPK
EFRYYELNLGRTHKVKEDGSKM---PLEPQEKWPTVRTMATWQWLDAMSFFCIKRQPSEG
KLPDVSLEGAAKHVN---------------------------------------------
------------------------------------------------------------
------------------------VPGKLYTEEGA--HIRPGTPQWHRYMQRKWPYLYCM
YNIGDDFVIEEINEKTNDLSLSLPMLLKYSEYFNYVSQPKLVS--DTLSFFARRY--GFV
WGSTPRKRD----QSIIDKLPPLSNWIALLDTEKNADVGAQ-LFHGLADVYST-GRTDSS
DIDVEGAYPHATLALNVGNRTTQMEVFRIQGADGNKFRQIGVNFASSAE--------ANA
IGLCHDLFRFPQLDQLKDEFERLMVETGREELLK-EMQANARNRKSRINIDTEEPVQDTA
>NC_027402_p44
------------------------------------------------------------
------------------------------------------------------------
--MEINTYYAPEDVIAKECKHVAYATDE---EKENDFVLIKEVIHTKDGRLIPRLVMREN
LKRPVYVTR--EEY-----RN----HQEKKEFEEKGKCQELWTTDAQMAKTLQMGLGARF
-------------PDPKKNLRRVCTSPYVYWADLPITSWIKQ-KYLKRWPN--N--ISPN
RLCVYDVETNEMD--G-------TKEPWIVSFILDD-EIHFFGAKNYMDRIGK-NAE---
-------EVILKKAQELL-------SKIEFDEKDKKT--GEKVTKTKDI--ISGYKIFTY
TCATAGQCIVRMFEEIHP-RLPDLLVAWNH-QFDISRMLETLQKEGIDPLGVFNHPDVPE
KYRRLWFKEDQANKKTESKSL----TKAPSQQWHVLYCTASFYCVDAMVLFRSLRVH-EG
QRPSYKLSAILYTEL---------------------------------------------
------------------------------------------------------------
------------------------GLHKLDIPGLP--Y--EDNLQWHIKAQRDYPAEYAV
YNMMDNLLIVLLDKKTNDLSSAISILAGFSMYDIFPSLPKRIC--VAFTYYLYDK--GYV
IGSVGSAMR----NDYDEEVIGTDGWIVTLTACMNAENGLNNILEEIDEYYSA-FRGQTA
DADLTQAYPSATNMMNQSRETTLIELLSINGVSEEIRRRTGVNLTAGRV---------NA
MEIATDFFCLPDKDTVLSTFLRKQGEVV--TEPMEYICGF--------------------
>NC_031107_p49
------------------------------------------------------------
------------------------------------------------------------
---MINNYFAPEDVIAKECKHVAYATDD---DKQNDFVLVKEVIHTKDGRLIPRVFGREN
LKRPIYITQ--PNH-----RN----HQEKKEYEERSKTQEFMTTDVKMAMTIQAGLGVRF
-------------PDPKKRLRQVCTSPYVYWADLPITSWIKQ-KYLKKYPN--S--VTPN
RLCIYDVETREED--G-------SRDPWLMSFVLDD-EIHFYATKDYLARCGRENFE---
-------ERLRKRAAELL-------CKIEFREKNKKT--GEEEVKARDV--LAGFTIYAH
EGVTSGHCIQMMFEEIHP-KLPDLMVAWNH-EFDISRMLEALARDNIDPADVFCHPSVPK
QYRKVWFKKDEASKKTESKSL----TKAPSQQWHILYCVASFYFVDAMCLFRSLRVH-EG
QRPSYKLNAILDSEL---------------------------------------------
------------------------------------------------------------
------------------------GLNKLDIPGLP--Y--EEKLEWHLRAQKEYPLEYSV
YNIFDNLMILLLDKKTNDLSSAISILAGYSMYDIFPSLPKRIC--VAFTYYLYEQNPSLV
IGCTGQAMR----NDFDEEVIGTDGWIVTLTACMNSENGLNNILKEIPVFHSA-FRGQTA
DADLTQAYPSATNMMNQSRETTLIELLSITGVSEEIRRRTGVNLTAGRV---------NA
MEIATDFFRLPDKDQVLTAFLVRQGETV--TDPIEYINGF--------------------
>MF459647_p56
------------------------------------------------------------
------------------------------------------------------------
------MTPNSSPIVARVCKHANYGVHRY--DPMKDLLGAKITNIHEDGTRSNQYTCIED
YKQDFYIVK--EKY-----RK----FEQNKDYIDERMCKKYTSSRARLAYNISKILYGR-
-------------PDVTAQLRQMKGSQYVFGCEQTIPVVFKQ-KFHEKYPEHQE--TEPY
RTAAYDVETNMH----SP-----DEEIIMASTTFEK-VAYFAADRNWFDEKND-------
-------EEIIANLRKY-----------------------EELYLRETLNRRGISHVEYE
LFDNEALIVKANIEKWHQ-WSPDWIASWNA-AFDMEKNETALKRHGFDVARIYCDPGVPN
HYCNYEFHPGRTHKVKENGDRT---PLEWQEKFPTVRTLASWQWVDAACKYAIKRAP-QG
KLESYGLNATAEREK---------------------------------------------
------------------------------------------------------------
------------------------VDGKLYTDKGE--HLLPGTLPWHIWMQKNAKYEYCM
YNIKDNIVIEDINDKTDDLSLSLPMLLKYSEYFNYPSQPSIIS--DTLSFVAKKY--GYV
WGCTGARRE----KPFTDILPTLGDWIALLETEKNAAMGKV-LFEGLSDVVSM-ARGLTD
DVDVEGAYPTETVALNVGNKTTRMEATRIQGADMMKFREIGVNYGSSPQ--------ANA
ISLCYELFRFPKAGEIQEVFESHLIKLGKEDILN-KLKAAEF------------------
>NC_017975_p24
------------------------------------------------------------
------------------------------------------------------------
----------MSKPKFIMGVHASYSQHRD--RPKNDMVLVKEKQLLEDGTIKENLRFFEN
YQRDFYVTK--PRY-----RD----HKSKKEWEKISRCSRIKTNQACLIPSIAKALNIR-
----------------KNGLRRMARNPSLYGADINVTTLILH-KYIETYGD--S--ELMP
TVAVMDYEWDVD-----------TGKPSIGTYMYEN-KVYLTIRKDKIANCGY--ST---
-------TAFINKLQEDFKKEVIPLVDEFYERTNADGKLI------NKNVARIYPELHVE
VVDLDLDVVRKLFKHTHT-TMPDYLTFWNG-ISDLEIIMALCEEYMVDPADFMNDPSVPK
EYRNCRLDKGLTETIDANGNKK---PKSPSEQWHVLSNMASWQFIDMMCCYHTNRAH-KP
NLPSYSFEFIMRLEL---------------------------------------------
------------------------------------------------------------
------------------------MMKKLRLVPKLNALAESDMGTWHKEMSNNHILEYAL
YATMDVIEPMILEAKSYEIRAQAYSNLTYHPIGDFKKNPRKLC--NAQHFSFLKS--GHI
VGTTSDQMR----EDVDNHIYQGDNWIITLNSSYHDQLETP--ALADSDIPTL-FSPSND
DGDLTSSYPSNSRLLNISKTTTVTELIKVKGIPEEIMREVGLNLSSNGD---------NS
IDFCYRVLGLPHLQDVLVSWDNSK------------------------------------
>MG655270_p291
------------------------------------------------------------
------------------------------------------------------------
---------MSSNNLRFECKHAIYTLSL---RGKSDIIFVKENVIDENGNSKPHTRIIKD
MKRDYYLTK--PAY-----RN----HQDKKDYEELSKLQKFSCPQWDLPNHISKMLGKG-
--------------ATDQQLRRVCRSPYVYGADIEPSSIVKA-MYEAKFPD--T--FTPY
KISVFDIETEMVD--ERY-----KGEPIMASLTFKE-RTFTFVIRRYFGGEAD-------
-------ERIHQKLKLAWDKYLG-------------------DWATK----RSITNPEFV
LVDSAADGFVKLFERAHE-WMPDFITGWNVLEFDYKVLTQTLTNAGINPADVICDPSVPQ
EYRNVYYYEGKTHKVKNDGKEVTKTSLANYEKWPYVNAPASFRWAESMSAYYYLRTM-NG
KELNYKLDNIAEKIL---------------------------------------------
------------------------------------------------------------
------------------------GVTKMKFSEAE--G--YHGADWHEFMQSNYKYEYVM
YNIFDCIVVEMMDEKTSDLSVAVPTFCGVSDYRNFISQPTRIA--EAMHYDVMKE--GYI
WGTTSDQMR----TELDDHIQGLGGWIVMLPTELVALNGKA-MFKELPNVKSY-VRTGTN
DIDVEGAYPTGTVIMNVGKQTTWIEMTQIEGLDDTEYRQVAVNLAAGGM--------NNA
GELARKLYKAPETITLLKDFMVEKHIEIDFMAAA--------------------------
>NC_023557_p285
------------------------------------------------------------
------------------------------------------------------------
---------MSSNNLRFECKHAIYTLSL---RGKSDIIFVKENVIDENGNSKPHTRIIKD
MKRDYYLTK--PAY-----RN----HQDKKDYEELSKLQKFSCPQWDLPNHISKMLGKG-
--------------ATDQQLRRVCRSPYVYGADIEPSSIVKA-MYEAKFPD--T--FTPY
KISVFDIETEMVD--ERY-----KGEPIMASLTFKE-RTFTFVIRRYFGGEAD-------
-------ERIHQKLKLAWDKYLG-------------------DWATK----RSITNPEFV
LVDSAADGFVKLFERAHE-WMPDFITGWNVLEFDYKVLTQTLTNAGINPADVICDPSVPQ
EYRNVYYYEGKTHKVKNDGKEVTKTSLANYEKWPYVNAPASFRWAESMSAYYYLRTM-NG
KELNYKLDNIAEKVL---------------------------------------------
------------------------------------------------------------
------------------------GVTKMKFSEAE--G--YHGADWHEFMQSNYKYEYVM
YNIFDCIVVEMMDEKTSDLSVAVPTFCGVSDYRNFISQPTRIA--EAMHYDVMKE--GYI
WGTTSDQMR----TELDDHIQGLGGWIVMLPTELVALNGKA-MFKELPNVKSY-VRTGTN
DIDVEGAYPTGTVIMNVGKQTTWIEMTQIEGLDDTEYRQVAVNLAAGGM--------NNA
GELARKLYKAPETITLLKDFMVEKHIEIDFMAAA--------------------------
>KY499642_p231
------------------------------------------------------------
------------------------------------------------------------
---MSNVQIPKEMIKGIECKYVAYQEARD--GSKDDMLLIKEVVHTKDNRQIPRIVLREN
FKRPVYTTK--KPY-----RN----HQDKKEYEELDKLDRWDTTQSRMSETLQKALGRSV
-------------PNPKLQLREVCRDPYIYFADLTAPTMLKA-AYRRKNPD--L--ITRN
KVAVLDIEADVVF--G-------TDEPIMISVTMGE-KKIIGIADWWAKRIPE--VE---
-------NTLHSKYAEYL-------SSITLKEKCKET--KKTIHVEHNLVAERGGDFKVI
TNGNMAEVIRDVMREVHE-WMPDFVAIWNM-NYDLPKIMACCEKYNIPHEDVWVDPKVPD
KYRKVWYKQAKAQRETNSKTI----AQHPADLWHVLYCLAGFYVIDAMCAFKKIRVA-NG
NEPDYKLDGVLNRHL---------------------------------------------
------------------------------------------------------------
------------------------GIGKLKFDQVK--AP-EGDIKWHIEMQRDWPAEYCI
YNLFDCVSVELLDEKTNDLGMTIPALAGISEYHIFPSLPKRLV--DNLHYFYLDR--KLI
AGCVGADIT----SDLDDDVINMTGWIVTLPAHMVEDNGLQ-CVKEIPKLKTM-FRVQTA
DDDITQAYPTAELTLNISKETTFVELKGIEGVSEMARRRSGINLTGGQT---------NA
IEICNELLNMPYIHTVLDAFESDIREGL--I-----------------------------
>KC131130_p107
------------------------------------------------------------
------------------------------------------------------------
-----------------MCKHAVYVPSKR--DKLKDMTFIKQTTIHENGDRTNQFLKVAD
YVRSFYIVR--EKY-----RK----FEQKKDYIDKRLVKEYKSTQARLAMSIKRVLHGI-
-------------NDRNADLMMMKNNPYVFGCETPVPVLIKH-KYFERYEEFQE--TEPS
TLAAYDVETDMVN---GD-----GEDVIMASTTMKE-KIFFSVVRSFFDGMSD-------
-------EEIMKGLKAS-----------------------EEELIGERLRRR-NATVHYN
LVDTQTECVENNIKVWHM-WEPDFISSWNA-SYDMQRNEHALIMGNRNLEEVYSDPSIPK
EFHYYKYDKGRTHKRKENGDSQ---PLEWQEQYPTVRAAAKWQWLDGASFYAIKNAP-KG
KKESYSLEFTAQDNG---------------------------------------------
------------------------------------------------------------
------------------------IEGKLYTDKGS--HLTQGKGAWHRWMQRNAKFEYCM
YNISDNLVIEEQDEKTNDIALNLPLLLKSTEFFDYPSQPKCIS--NELSFIAAEH--GYI
WGTKGRGGKD----ELDKHKPTLGDWIALLETEKNADNGKA-IFIGMPHIRSR-GRGLTD
DVDVEGAYPTATVALNVSNKTTRIEACAIQGLNPLEFREVGVNYASSPK--------ANA
VSLCQTLHRFPGFEEMEEVFPELFEEEFGEALPK-AA-----------------------
>MF285618_p9
------------------------------------------------------------
------------------------------------------------------------
-MSQVKPAFTKDDILGFEFKHASYAPKQD--SYSDDLVVIKEVVHLKDGRKLPNLRFIRN
YQRPYFITL--ESQ-----RR----HKDKRVWEKLDNVRRYECTQAEMVGDIQRKLKMR-
-----------------GGLKMLNRNPYLYGTDVTSTVLLKH-AYMNKYPD--L--KSEY
RVAHLDIEFDVTY--G-------TNKINMISVSCGN-EVYQFVTKHYAGTNPN--FV---
-------EEVKACYEREVKPILHEIDNR-----------KEGFDFFSKRGIVHDFNIHVE
IVDDEFEAVQAIFDKLHNVLKPDMLSIWNL-PYDTGKMIQAIERRGFTPEEIFCDPKVPK
DFRYFKLIEGAAKVFDANGVAE---SKDPCDRWHKVHCPSNFFWVDQMSVRRAVRKH-LN
KESSYALGKILEKTF---------------------------------------------
------------------------------------------------------------
------------------------GFGKLKGDGD---L-RATGLDWHKHMQRHNKIFYCV
YNMFDNIGAQLLDEVTLDLRSTFPAQCGYSDLHSYGSQGRKLA--DDFYFDLLDR--GYI
LSGVSDKME----KEMDKHLVPLDGWISTLSAHMVHPDMGNKLLEDMPNSVTK-IIRWVL
DIDVKSSYPSTGVWMNLSQETTKWAMCRIRGVSMEEQRRAGLNLVSGKV---------NS
VDIMVNVCNAPTAMQLLQRFKAAKGIA---------------------------------
>NC_031007_p46
------------------------------------------------------------
------------------------------------------------------------
--MVSNLHFNPEDVVGKECKSVAYSTDA---IKQNDLVVIKEVVHTKDGRQIPRLVMREN
VKRPIFVTREGPSF-----RN----HQEKKEYELRERCVEYHTTDVKMSQTIQMALGNSF
-------------PNPKLNLKMACRSPFVYWADLPVTSWIKQ-KYKEKWPE--A--QSLN
RACVFDVETKEDD--G-------SKRMEMVSFVCDK-EIHFFAHAEYFDRIKG--GH---
-------EAIEKKTVELL-------SRVPFTKNKKGKKLPKGEVEYRDLIKENGYELFVH
RCATPAQCIVAMFHEVHR-LLPDLLVAWNI-DYDLTIMMKELDAEGIPYEDVFCHPDVPQ
KYRNVWYKRDQASKKTESKTL----TKSPADQWHVLYCQASFYAVDAMCLFKKIRTH-EG
NRPTYKLSAILEGEV---------------------------------------------
------------------------------------------------------------
------------------------GVGKLDIPGLE--Y--KDNVDWHITAQRDFPLEYCA
YNIMDNLLILLLDSLTNDLSSALSILSGVSMYDIFPSLPKRIC--NEFTYFLWNQ--GLV
IGSVGNAIK----NDFDEEVIGTDGWIVTLPAHMNAENGLH-VVKEIPSLLTA-FRGQTA
DADLTQAYPSCTNMANQSRETTIIELISIEGVSEEVRRRAGVNLTAGRV---------NA
MEIANEMFLMPDKEVVLEAFRRRMAAAN--EEVVTTIDEHAA------------------
>NC_028999_p83
------------------------------------------------------------
------------------------------------------------------------
---MSDLQFTKEDVVGIEAKHITYVTDQT--GRRHDAHVVKEIIHLKDKRRIPRIRVVED
YKRPFWITQ--KGR-----QN----HKEKKDYEFERNLQKYTCTQLEMPRMIAKLLGDYS
-------------MGPNPRMRQLSRSPYLYGSDVSSVCCLKN-DYREQYPE--L--ISRN
TVAGGDIETNVY--EEEN-----EGQIICMSVTHKE-NVYLAYLKHWVKDLDD-PVA---
-------ETFAEL---------------------------ERIPELVTLKKARNLNIEIE
VVNSPADIIINCMRRLHK-WKPDFFAFWNI-DFDMSRILTTLENYGIDPKNVFSDPQVPP
NYRYFHYRQDQAMTTTASGVTK---SKGPEDQWHWITAPASFQCIDSMATYRVTRLA-KG
KESSYALDAILKKELSMDEQETVQTEEEFNSWMKKMGKAIAERSGAHPYWSVNDPSKDKV
DVTYNDVPVYTAAQEKLLQE-----------------GIDPEDPRVQVEYRREEKVEREE
HWEEVDSLVWGVNVHPGFGVGMRLNFGKLKFAETD--Y--LGGIEWHIEMQKNHKVRYGL
YNIIDSIRLEQLDEKINDLASSITLFSKSSDYKNFSSNPKRLC--DDMHFWYLKRPEPCV
IGSSSDQMV----HDLDSYVVGHDSWIVTLPSYMAGPNGLK-CVKDLPDYNTL-LFTHVA
DLD---------------------------------------------------------
------------------------------------------------------------
>NC_028899_p189
MNPILLLNKRNKTAVYPPDLLIFDIDRTCPILGNPYPMGDQDDVDERNHVIEEYRKHFEK
EYARNGALTKRIHEFADLIRSGRRIGLRCWCHPKPCHGRIIISKIKELLEGTMSEAPNKP
NKEFLNYPFNPEDIDYTECRFAIHMPRRG--ENGIDLHAVKEVIHFKDGTSKPWVRYVPN
YKCKFWTTR--PHL-----RKGQFAHKQKKEWEHLDNLVEGQATASDLPFAVARALDQL-
--------------RLAQRYFDLKDSPYVYGLDIPSTVQLKH-DYTVRMQGK-A--DTPF
ITAYSDTETNMLGIEEGA-----SKHIIMQSLFHEDGRLYTVILKDFLKTLPG-NPE---
-------QALRALYDEHMP----------------------------EQGKEIVKEWEIL
LVDQPIDIVKAILLRCHT-WQPDFLSFWNM-IFDLDKMIECVEDAGYRVEDIFCDPRLPR
ELRYAYLKRANPSKTSASGRLM---TKKPADQWHSFLCPASFYIIDQMATYRFIRKS-KQ
LEKSYGLDDILGKELK--------------------------------------------
------------------------------------------------------------
------------------------GLGKLKHKPAE--G--LTKAEFHIFMQQKYPGEYVI
YHIWDAVCMHLLTLKTKDLSFSLPGTTEFSDFMSFESEPKRYI--HKFHFYALEK-HNCV
TGVSSKALV----QEYDDMTISTKGHIVTLEPHLTVDTGLK-VFNDYPGLQTN-FYGHNA
DLDVKSSYPYGQWGFNMSRMTTVRELIEIEGVRDHTRRIQGLNISGGRS---------NA
VEFCTEIFGLPSLAELDKIYDQANA-----------------------------------
>NC_010821_p142
------------------------------------------------------------
------------------------------------------------------------
----MNEEFSKEDVLGIEAKHITYVTEQG---GRNDIHVVKEVVHLKDKRRIPRIKIIPN
YERSFYVDP--MAYKDENLRT----YKEKRDYMPVSQLRKFKTTQSKMPFAVAKALKDYS
-------------MGPNPRLRQLSRSPYLYGSDVSSVCCLKN-DYRTANPD--L--ISRN
TVAGGDIETNVY--EAEH-----DGQIICMSVTHKE-NVYLAYLKHWVKDLKD-PVK---
-------ETLEEL---------------------------ERIPELVTLKKARNLNIHIE
VVETSADVVIQCMRRLHM-WKPDFFAFWNI-NFDMKRILKTLEDAGINPADVFSDPSIPR
EYKKFYYKEDQAMQVTASGVTK---SKGPEDQWHWVTAPASFQCIDSMATYRVTRLA-KG
KESSYALDAILKKELSVDEEAEIKTEEDLNAFIKMANKAMADRSGSYPYWAVSNPANDTI
--TYKTEVDYSGVEEDEEEEDDLEEDEEGEDVIPDFDDDDDASAIYDLSEGDNITEIREC
HWDDVDQLIWGVNVQPGFKVSFKLNFGKLKFAETD--H--LFGIEWHREMQVKHKVRYGL
YNIIDSIRLEQLDEKINDLASSITLFSKSSDYKNFNSNPKRLC--DDMHFWYLNREEPCV
IGSSSDQML----HPLDQYVVGHDGWIVTLPSYMAGPNGLK-CVKDFPNYRSL-IFAHVA
DLDIVSTYPNVSQILNIARETTIMETAALQGVSDHTKRELGVNLTGCRT---------NA
IEIAQKVLKAPRLDKLLEAYLKSKGEVVEVESPKL-------------------------