phrog_3015 is made of 48 protein sequences and is annotated as "RNA polymerase beta subunit"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
672.58 1207 653


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
KT895374_p219 ALN97898.1 DNA-directed RNA polymerase beta' subunit KT895374 Bacillus phage vB_BpuM-BpSp Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_016163_p103 YP_004934336.1 DNA-directed RNA polymerase, beta' subunit NC_016163 Yersinia phage phiR1-37 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
MF360957_p42 AST99864.1 RNA polymerase beta subunit MF360957 Bacillus virus PBS1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_031039_p153 YP_009283058.1 DNA-directed RNA polymerase beta' subunit NC_031039 Bacillus phage AR9 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
MG655268_p250 AUG86357.1 putative DNA directed RNA polymerase beta subunit MG655268 Erwinia phage vB_EamM_Desertfox Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Desertfox.
AP017972_p114 BAW98323.1 phage terminase, large subunit @ intein-containing AP017972 Vibrio phage pTD1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tidunavirus; Vibrio virus pTD1.
NC_010821_p128 YP_001956854.1 hypothetical protein NC_010821 Pseudomonas phage 201phi2-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
KU886223_p253 ANH51712.1 putative DNA directed RNA polymerase beta subunit KU886223 Erwinia phage vB_EamM_Simmy50 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Simmy50.
NC_004629_p74 NP_803640.1 ORF074 NC_004629 Pseudomonas phage phiKZ Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus.
KU886222_p252 ANJ65064.1 putative DNA directed RNA polymerase beta subunit KU886222 Erwinia phage vB_EamM_Special G Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus SpecialG.
MG655270_p254 AUG87003.1 putative DNA directed RNA polymerase beta subunit MG655270 Erwinia phage vB_EamM_Mortimer Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
MF459646_p44 ASU03626.1 putative bifunctional DNA directed RNA polymerase subunit beta prime beta double prime MF459646 Erwinia phage vB_EamM_RisingSun Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Risingsunvirus; Erwinia virus Risingsun.
MG720308_p82 AUR80932.1 DNA-directer RNA polymerase beta subunit MG720308 Vibrio phage Aphrodite1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Aphroditevirus; Vibrio virus Aphrodite1.
MF459647_p44 ASU03871.1 putative bifunctional DNA directed RNA polymerase subunit beta prime beta double prime MF459647 Erwinia phage vB_EamM_Joad Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Risingsunvirus; unclassified Risingsunvirus.
MF042360_p113 ARV76744.1 putative DNA-directed RNA polymerase beta prime subunit MF042360 Pseudomonas phage Phabio Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
MG655267_p250 AUG86037.1 putative DNA directed RNA polymerase beta subunit MG655267 Erwinia phage vB_EamM_Bosolaphorus Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
NC_023557_p249 YP_009005041.1 putative DNA-directed RNA polymerase beta subunit NC_023557 Erwinia phage Ea35-70 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus.
KU886225_p255 ANH52354.1 putative DNA-directed RNA polymerase beta subunit KU886225 Erwinia phage vB_EamM_Deimos-Minion Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Deimos.
MG655269_p252 AUG86679.1 putative DNA directed RNA polymerase beta subunit MG655269 Erwinia phage vB_EamM_MadMel Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
MF063068_p66 ARV77237.1 hypothetical protein MF063068 Pseudomonas phage Noxifer Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Noxifervirus; Pseudomonas virus Noxifer.
NC_023610_p7 YP_009010060.1 putative ATP-dependent DNA helicase NC_023610 Erwinia phage PhiEaH1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Iapetusvirus; Erwinia virus EaH1.
KC131130_p94 AGB07208.1 bifunctional DNA-directed RNA polymerase subunit beta'-beta'' KC131130 Vibrio phage VP4B Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tidunavirus; Vibrio virus VP4B.
AP017924_p274 BAW19248.1 putative Putative RNA polymerase beta prime subunit AP017924 Ralstonia phage RP12 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; Ralstonia virus RP12.
NC_028899_p214 YP_009208018.1 putative RNA polymerase beta prime subunit NC_028899 Ralstonia phage RSF1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chiangmaivirus.
NC_017975_p158 YP_006383438.1 hypothetical protein NC_017975 Halocynthia phage JM-2012 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_028950_p208 YP_009213057.1 hypothetical protein NC_028950 Ralstonia phage RSL2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chiangmaivirus.
KU886224_p248 ANH52029.1 putative DNA directed RNA polymerase beta subunit KU886224 Erwinia phage vB_EamM_RAY Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus RAY.
KU521356_p97 ANM44855.1 putative non-virion DNA-dependent RNA polymerase subunit KU521356 Pseudomonas phage KTN4 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; Pseudomonas virus phiKZ.
AP017925_p271 BAW19534.1 putative RNA polymerase beta prime subunit AP017925 Ralstonia phage RP31 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; unclassified Ripduovirus.
MF805716_p281 ATN94858.1 hypothetical protein MF805716 Pseudomonas phage SL2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; Pseudomonas virus SL2.
NC_016571_p74 YP_004957981.1 RNA polymerase beta' subunit NC_016571 Pseudomonas phage OBP Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_007623_p39 YP_418072.1 putative ATP-dependent DNA helicase NC_007623 Pseudomonas phage EL Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Elvirus.
NC_031120_p38 YP_009292118.1 putative DNA-directed RNA polymerase beta subunit NC_031120 Erwinia phage vB_EamM_Caitlin Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
KY499642_p221 AQT28162.1 putative DNA-directed RNA polymerase beta subunit KY499642 Vibrio phage pVa-21 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_031010_p39 YP_009278652.1 putative DNA-directed RNA polymerase beta' subunit NC_031010 Erwinia phage vB_EamM_Kwan Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_031107_p40 YP_009290670.1 putative DNA-directed RNA polymerase beta subunit NC_031107 Erwinia phage vB_EamM_Asesino Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus.
KU726251_p36 AMR59687.1 putative DNA-directed RNA polymerase beta'subunit KU726251 Enterobacteria phage SEGD1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Seoulvirus; Salmonella virus SPN3US.
NC_031126_p40 YP_009292740.1 putative DNA-directed RNA polymerase beta subunit NC_031126 Erwinia phage vB_EamM_ChrisDB Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
NC_027402_p35 YP_009153329.1 putative DNA-directed RNA polymerase beta' subunit NC_027402 Salmonella phage SPN3US Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Seoulvirus.
KX397370_p42 ANZ49689.1 putative DNA-directed RNA polymerase beta subunit KX397370 Erwinia phage vB_EamM_Machina Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; Erwinia virus Machina.
NC_031127_p43 YP_009293020.1 putative DNA-directed RNA polymerase beta subunit NC_031127 Erwinia phage vB_EamM_Huxley Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
KX397373_p38 ANZ50475.1 putative DNA-directed RNA polymerase beta subunit KX397373 Erwinia phage vB_EamM_Stratton Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus; unclassified Erskinevirus.
KX397371_p43 ANZ49962.1 putative DNA-directed RNA polymerase beta subunit KX397371 Erwinia phage vB_EamM_Parshik Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
NC_031043_p37 YP_009283526.1 putative DNA-directed RNA polymerase beta subunit NC_031043 Erwinia phage vB_EamM_Phobos Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
NC_021531_p36 YP_008125776.1 putative DNA-directed RNA polymerase beta' subunit 1 NC_021531 Cronobacter phage CR5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
NC_031007_p37 YP_009278349.1 putative DNA-directed RNA polymerase beta subunit NC_031007 Erwinia phage vB_EamM_EarlPhillipIV Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
NC_019929_p218 YP_007237868.1 hypothetical protein NC_019929 Erwinia phage phiEaH2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus.
MF285618_p328 ATA65663.1 putative ATP-dependent DNA helicase MF285618 Serratia phage 2050HW Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_3295 44 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 40 4.46E-164 154.47
phrog_16 2054 DNA helicase DNA, RNA and nucleotide metabolism 37 1.27E-74 65.02
phrog_23982 3 RNA polymerase DNA, RNA and nucleotide metabolism 3 0 1000
phrog_26909 3 virion structural protein head and packaging 3 0 1000
phrog_18969 4 membrane protein moron, auxiliary metabolic gene and host takeover 2 4.56E-12 2.46
phrog_28011 2 no annotation unknown function 2 0 1000
phrog_33091 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_25354 no annotation unknown function 99.1 5.4E-14 138-379 / 678-947
phrog_2962 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 98.9 1E-12 109-368 / 157-410

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF04998.16 RNA polymerase Rpb1, domain 5 6.8E-26 228-461 / 1-275
PF04983.17 RNA polymerase Rpb1, domain 3 2.7E-08 32-140 / 55-165
PF05000.16 RNA polymerase Rpb1, domain 4 0.00012 179-220 / 45-86

Annotations of the NCBI proteins of this PHROG


12:DNA-directed RNA polymerase beta subunit 7:DNA directed RNA polymerase beta subunit 4:protein of an unannotated phage 4:DNA-directed RNA polymerase beta' subunit 4:hypothetical protein 3:ATP-dependent DNA helicase 2:bifunctional DNA directed RNA polymerase subunit beta prime beta double prime 2:RNA polymerase beta prime subunit 1:DNA-directed RNA polymerase beta' subunit 1 1:DNA-directed RNA polymerase beta prime subunit 1:RNA polymerase beta subunit 1:DNA-directed RNA polymerase, beta' subunit 1:non-virion DNA-dependent RNA polymerase subunit 1:phage terminase, large subunit @ intein-containing 1:RNA polymerase beta' subunit 1:DNA-directer RNA polymerase beta subunit 1:Putative RNA polymerase beta prime subunit 1:DNA-directed RNA polymerase beta'subunit

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K02314 dnaB : replicative DNA helicase [EC:3.6.4.12] ko03030 DNA replication
ko04112 Cell cycle - Caulobacter
209 1

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006351 transcription, DNA-templated
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity

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