phrog_3022 is made of 47 protein sequences and is annotated as "DNA primase"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
793.57 1273 779


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p14703 no NCBI prot ID no annotation VI_04348 Alphaproteobacteria_gi_365882891 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_020853_p10 YP_007674907.1 hypothetical protein NC_020853 Loktanella phage pCB2051-A Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_019447_p57 YP_007002123.1 putative bifunctional DNA primase/polymerase NC_019447 Brucella phage Pr Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Perisivirus.
NC_019446_p58 YP_007002066.1 putative bifunctional DNA primase/polymerase NC_019446 Brucella phage Tb Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Perisivirus.
MH023293_p41 AVP40227.1 putative bifunctional DNA primase/polymerase MH023293 Escherichia phage vB_EcoS-Sa179w3YLVW Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_020846_p57 YP_007674019.1 hypothetical protein NC_020846 Vibrio phage pYD21-A Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_006953_p47 YP_224275.1 hypothetical protein NC_006953 Listonella phage phiHSIC Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
KU747973_p34 ANI22051.1 putative bifunctional DNA primase/polymerase KU747973 Pseudoalteromonas phage vB_PspS-H40/1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_025471_p64 YP_009104301.1 putative bifunctional DNA primase/polymerase NC_025471 Idiomarinaceae phage Phi1M2-2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
KT160311_p39 AKU42620.1 bifunctional DNA primase/polymerase domain protein KT160311 Vibrio phage H188 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
MF158038_p2 ATE85649.1 DNA primase/polymerase MF158038 Shigella phage Sf11 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Tunavirinae; Tunavirus; Shigella virus Sfin1.
NC_028819_p57 YP_009200243.1 hypothetical protein NC_028819 Pseudoalteromonas phage H103 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p120103 no NCBI prot ID no annotation VI_06626 Gammaproteobacteria_gi_257455533_8222_51655 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
HG428758_p53 CDL18804.1 putative DNA primase/helicase HG428758 Brucella phage F1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Perisivirus; Brucella virus Tb.
KM434185_p49 AIW01700.1 hypothetical protein KM434185 Pseudomonas phage vB_Pae_PS9N Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Septimatrevirus; Pseudomonas virus Kakheti25.
NC_029019_p38 YP_009219195.1 replicative primase helicase NC_029019 Stenotrophomonas phage vB_SmaS-DLP_2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Septimatrevirus; unclassified Septimatrevirus.
NC_028879_p37 YP_009205632.1 putative primase/helicase NC_028879 Pseudomonas phage PaMx42 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Septimatrevirus; unclassified Septimatrevirus.
NC_007806_p36 YP_001293443.1 hypothetical protein ORF036 NC_007806 Pseudomonas phage 73 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Septimatrevirus.
NC_029028_p60 YP_009220030.1 DNA primase/helicase NC_029028 Enterobacteria phage JenP1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nonagvirus.
NC_028776_p63 YP_009196857.1 putative primase NC_028776 Escherichia phage CAjan Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Seuratvirus.
NC_026610_p15 YP_009126572.1 primase/helicase NC_026610 Vibrio phage VpKK5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_024381_p35 YP_009044370.1 replicative primase/helicase NC_024381 Pseudomonas phage vB_PaeS_SCH_Ab26 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Septimatrevirus.
NC_017864_p38 YP_006299902.1 replicative primase/helicase NC_017864 Pseudomonas phage vB_Pae-Kakheti25 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Septimatrevirus.
KR537872_p38 AKI28789.1 replicative primase helicase KR537872 Stenotrophomonas phage vB_SmaS-DLP_1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Septimatrevirus; unclassified Septimatrevirus.
MG897800_p11 AVJ48083.1 DNA primase/helicase MG897800 Pseudomonas phage vB_PaeS_C1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Septimatrevirus; unclassified Septimatrevirus.
NC_028831_p14 YP_009201557.1 primase [Burkholderia phage KL1] NC_028831 Escherichia phage slur01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Seuratvirus; unclassified Seuratvirus.
KR935215_p37 AKU43220.1 replicative primase/helicase KR935215 Rhodobacter phage RcSpartan Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Titanvirus; Rhodobacter virus RcSpartan.
NC_029021_p58 YP_009219338.1 DNA primase/helicase NC_029021 Enterobacteria phage JenK1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nonagvirus.
JQ067084_p58 ALH23772.1 putative primase/helicase JQ067084 Pseudomonas phage PaMx25 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nipunavirus; Pseudomonas virus PaMx25.
NC_026608_p12 YP_009126402.1 primase NC_026608 Paracoccus phage vB_PmaS_IMEP1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_024146_p25 YP_009032348.1 DNA primase NC_024146 Enterobacteria phage 9g Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nonagvirus.
NC_018278_p37 YP_006560788.1 primase NC_018278 Burkholderia phage KL1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kilunavirus.
NC_029097_p37 YP_009225702.1 replicative primase/helicase NC_029097 Rhodobacter phage RcTitan Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Titanvirus.
NC_023590_p11 YP_009008515.1 putative replicative primase/helicase NC_023590 Acinetobacter phage IME_AB3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Lokivirus; Acinetobacter virus IMEAB3.
MG948468_p61 AVJ51816.1 primase MG948468 Pantoea phage vB_PagS_Vid5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vidquintavirus; Pantoea virus Vid5.
KX898400_p52 ARB11197.1 putative primase/helicase KX898400 Pseudomonas phage JG054 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nipunavirus; unclassified Nipunavirus.
NC_029033_p8 YP_009220309.1 replicative primase/helicase NC_029033 Achromobacter phage phiAxp-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_028997_p59 YP_009216997.1 DNA primase/helicase NC_028997 Enterobacteria phage JenP2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nonagvirus.
NC_027378_p60 YP_009152004.1 primase NC_027378 Escherichia phage Seurat Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Seuratvirus.
KX898399_p54 ARB11122.1 putative primase/helicase KX898399 Pseudomonas phage JG012 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nipunavirus; unclassified Nipunavirus.
NC_031058_p56 YP_009285867.1 putative primase/helicase NC_031058 Pseudomonas phage NP1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nipunavirus.
KU197014_p39 AMW36155.1 replicative primase/helicase KU197014 Xanthomonas phage XAJ2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
KT716399_p38 ALH46243.1 putative primase/helicase KT716399 Pseudomonas phage POR1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_027296_p76 YP_009145935.1 putative DNA primase protein NC_027296 Rhizobium phage RHEph06 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Kleczkowskavirus; unclassified Kleczkowskavirus.
KX826077_p1 APU03124.1 primase KX826077 Salmonella phage UPF_BP2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Rosemountvirus; unclassified Rosemountvirus.
NC_031250_p76 YP_009302995.1 primase NC_031250 Salmonella phage BP63 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Rosemountvirus; Salmonella virus BP63.
NC_023859_p119 YP_009021564.1 hypothetical protein NC_023859 Microbacterium phage vB_MoxS-ISF9 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Farahnazvirus; Microbacterium virus ISF9.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_13059 8 HTH DNA binding protein DNA, RNA and nucleotide metabolism 8 0 1000
phrog_11967 8 no annotation unknown function 8 0 1000
phrog_19703 4 no annotation unknown function 3 3.76E-17 7.55
phrog_3633 39 no annotation unknown function 3 3.09E-12 2.63
phrog_25386 3 no annotation unknown function 3 0 1000
phrog_33005 2 no annotation unknown function 2 0 1000
phrog_28700 2 no annotation unknown function 2 0 1000
phrog_28429 2 no annotation unknown function 2 0 1000
phrog_18104 5 transcriptional regulator transcription regulation 2 4.91E-12 2.43
phrog_9154 12 no annotation unknown function 2 1.08E-10 1.09

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_10371 DNA helicase DNA, RNA and nucleotide metabolism 93.9 0.006 329-756 / 274-667
phrog_10514 DNA primase DNA, RNA and nucleotide metabolism 99.9 2.6E-33 323-759 / 313-724
phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 96.9 7.3E-06 388-608 / 516-718
phrog_13901 DNA primase/helicase DNA, RNA and nucleotide metabolism 100.0 6.4E-40 4-272 / 2-283
phrog_14296 DNA primase DNA, RNA and nucleotide metabolism 97.7 9.8E-08 360-757 / 19-382
phrog_15962 DNA primase DNA, RNA and nucleotide metabolism 98.5 1.2E-10 20-298 / 17-285
phrog_1829 DNA primase DNA, RNA and nucleotide metabolism 100.0 1.7E-36 4-274 / 2-287
phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 97.9 2E-08 361-660 / 33-380
phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism 99.5 2.3E-18 335-752 / 58-512
phrog_25777 DNA primase DNA, RNA and nucleotide metabolism 99.6 1.7E-19 328-691 / 412-842
phrog_29311 no annotation unknown function 96.2 7.9E-05 678-775 / 112-214
phrog_33132 DNA primase DNA, RNA and nucleotide metabolism 99.3 3.3E-16 333-727 / 17-418
phrog_35045 DNA primase DNA, RNA and nucleotide metabolism 97.4 4.5E-07 11-269 / 7-309
phrog_5311 helicase DNA, RNA and nucleotide metabolism 99.4 2.1E-17 349-769 / 314-720
phrog_5852 DNA polymerase/primase DNA, RNA and nucleotide metabolism 96.7 1.3E-05 56-152 / 120-219
phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism 97.4 5.5E-07 65-176 / 49-176
phrog_8643 DNA polymerase/primase DNA, RNA and nucleotide metabolism 99.8 2E-23 7-156 / 27-163
phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism 92.3 0.022 67-176 / 114-257

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF13148.5 Protein of unknown function (DUF3987) 2.4E-16 452-764 / 3-365
PF09250.10 Bifunctional DNA primase/polymerase, N-terminal 4.1E-13 74-234 / 1-151
PF00493.22 MCM2/3/5 family 8.2E-08 713-757 / 278-320
PF06431.10 Polyomavirus large T antigen C-terminus 7.9E-05 485-639 / 156-284
PF13337.5 Putative ATP-dependent Lon protease 0.00017 713-757 / 391-434
PF07726.10 ATPase family associated with various cellular activities (AAA) 0.0003 486-509 / 1-24
PF05272.10 Virulence-associated protein E 0.00035 483-509 / 58-84
PF00519.16 Papillomavirus helicase 0.00095 485-509 / 263-287
PF12774.6 Hydrolytic ATP binding site of dynein motor region D1 0.00096 485-509 / 33-57
PF01078.20 Magnesium chelatase, subunit ChlI 0.001 485-509 / 23-47
PF07728.13 AAA domain (dynein-related subfamily) 0.0018 486-509 / 1-24

Annotations of the NCBI proteins of this PHROG


7:hypothetical protein 7:primase/helicase 7:replicative primase/helicase 7:primase 5:bifunctional DNA primase/polymerase 5:DNA primase/helicase 2:replicative primase helicase 1:primase [Burkholderia phage KL1] 1:DNA primase/polymerase 1:DNA primase protein 1:bifunctional DNA primase/polymerase domain protein 1:DNA primase

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K06919 K06919 : putative DNA primase/helicase no pathways 78 4

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0005524 ATP binding
GO:0006260 DNA replication
GO:0016887 ATPase activity
GO:0006270 DNA replication initiation
GO:0004003 ATP-dependent DNA helicase activity
GO:0003677 DNA binding

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