phrog_3148 is made of 46 protein sequences and is annotated as "RNA polymerase beta subunit"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
1422.61 1789 1423


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
MG655270_p169 AUG86918.1 putative RNA polymerase beta subunit MG655270 Erwinia phage vB_EamM_Mortimer Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
KY499642_p167 AQT28108.1 putative DNA-directed RNA polymerase beta subunit KY499642 Vibrio phage pVa-21 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
KX397373_p251 ANZ50688.1 putative DNA-directed RNA polymerase beta subunit KX397373 Erwinia phage vB_EamM_Stratton Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus; unclassified Erskinevirus.
NC_028950_p37 YP_009212886.1 hypothetical protein NC_028950 Ralstonia phage RSL2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chiangmaivirus.
NC_031120_p246 YP_009292326.1 putative DNA-directed RNA polymerase beta subunit NC_031120 Erwinia phage vB_EamM_Caitlin Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
KU886225_p170 ANH52268.1 putative RNA polymerase beta subunit KU886225 Erwinia phage vB_EamM_Deimos-Minion Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Deimos.
AP017924_p41 BAW19015.1 putative RNA polymerase beta subunit AP017924 Ralstonia phage RP12 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; Ralstonia virus RP12.
NC_031010_p259 YP_009278872.1 putative DNA-directed RNA polymerase beta subunit NC_031010 Erwinia phage vB_EamM_Kwan Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
KU886222_p166 ANJ64976.1 putative RNA polymerase beta subunit KU886222 Erwinia phage vB_EamM_Special G Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus SpecialG.
MG655269_p166 AUG86594.1 putative RNA polymerase beta subunit MG655269 Erwinia phage vB_EamM_MadMel Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
NC_031127_p244 YP_009293221.1 putative DNA-directed RNA polymerase beta subunit NC_031127 Erwinia phage vB_EamM_Huxley Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
KU886224_p164 ANH51945.1 putative RNA polymerase beta subunit KU886224 Erwinia phage vB_EamM_RAY Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus RAY.
NC_031007_p217 YP_009278529.1 putative DNA-directed RNA polymerase beta subunit NC_031007 Erwinia phage vB_EamM_EarlPhillipIV Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
NC_004629_p178 NP_803744.1 ORF178 NC_004629 Pseudomonas phage phiKZ Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus.
NC_023557_p164 YP_009004956.1 hypothetical protein NC_023557 Erwinia phage Ea35-70 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus.
NC_031107_p251 YP_009290881.1 putative DNA-directed RNA polymerase beta subunit NC_031107 Erwinia phage vB_EamM_Asesino Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus.
NC_031126_p253 YP_009292953.1 putative DNA-directed RNA polymerase beta subunit NC_031126 Erwinia phage vB_EamM_ChrisDB Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
MF063068_p195 ARV77364.1 hypothetical protein MF063068 Pseudomonas phage Noxifer Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Noxifervirus; Pseudomonas virus Noxifer.
MF805716_p160 ATN94737.1 hypothetical protein MF805716 Pseudomonas phage SL2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; Pseudomonas virus SL2.
AP017925_p38 BAW19301.1 putative RNA polymerase beta subunit AP017925 Ralstonia phage RP31 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; unclassified Ripduovirus.
MF042360_p263 ARV76894.1 putative RNA polymerase subunit beta MF042360 Pseudomonas phage Phabio Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
MG720308_p11 AUR80913.1 putative RNA polymerase beta subunit MG720308 Vibrio phage Aphrodite1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Aphroditevirus; Vibrio virus Aphrodite1.
NC_010821_p270 YP_001956996.1 putative RNA polymerase beta subunit NC_010821 Pseudomonas phage 201phi2-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
KU726251_p242 AMR59893.1 putative DNA-directed RNA polymerase beta subunit KU726251 Enterobacteria phage SEGD1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Seoulvirus; Salmonella virus SPN3US.
NC_023610_p145 YP_009010198.1 RNA polymerase beta subunit NC_023610 Erwinia phage PhiEaH1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Iapetusvirus; Erwinia virus EaH1.
MG655267_p166 AUG85953.1 putative RNA polymerase beta subunit MG655267 Erwinia phage vB_EamM_Bosolaphorus Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
KU521356_p219 ANM44977.1 putative beta/beta'-like virion-associated protein KU521356 Pseudomonas phage KTN4 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; Pseudomonas virus phiKZ.
AP017972_p192 BAW98401.1 phage protein AP017972 Vibrio phage pTD1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tidunavirus; Vibrio virus pTD1.
MF459647_p232 ASU03683.1 putative RNA polymerase beta subunit MF459647 Erwinia phage vB_EamM_Joad Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Risingsunvirus; unclassified Risingsunvirus.
MG655268_p165 AUG86272.1 putative RNA polymerase beta subunit MG655268 Erwinia phage vB_EamM_Desertfox Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Desertfox.
KC131130_p17 AGB07131.1 hypothetical protein KC131130 Vibrio phage VP4B Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tidunavirus; Vibrio virus VP4B.
NC_027402_p241 YP_009153535.1 putative DNA-directed RNA polymerase beta subunit 5 NC_027402 Salmonella phage SPN3US Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Seoulvirus.
NC_019929_p161 YP_007237811.1 putative phage DNA-directed RNA polymerase beta subunit 2 NC_019929 Erwinia phage phiEaH2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus.
MF459646_p230 ASU03440.1 putative RNA polymerase beta subunit MF459646 Erwinia phage vB_EamM_RisingSun Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Risingsunvirus; Erwinia virus Risingsun.
NC_021531_p209 YP_008125949.1 putative DNA-directed RNA polymerase beta subunit 3 NC_021531 Cronobacter phage CR5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
KU886223_p167 ANH51629.1 putative RNA polymerase beta subunit KU886223 Erwinia phage vB_EamM_Simmy50 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Simmy50.
NC_028899_p40 YP_009207844.1 putative RNA polymerase beta subunit NC_028899 Ralstonia phage RSF1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chiangmaivirus.
NC_016571_p278 YP_004958185.1 putative virion-associated RNA polymerase beta subunit NC_016571 Pseudomonas phage OBP Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_031043_p223 YP_009283712.1 putative DNA-directed RNA polymerase beta subunit NC_031043 Erwinia phage vB_EamM_Phobos Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
KX397370_p245 ANZ49892.1 putative DNA-directed RNA polymerase beta subunit KX397370 Erwinia phage vB_EamM_Machina Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; Erwinia virus Machina.
KX397371_p244 ANZ50163.1 putative DNA-directed RNA polymerase beta subunit KX397371 Erwinia phage vB_EamM_Parshik Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
NC_017975_p76 YP_006383356.1 hypothetical protein NC_017975 Halocynthia phage JM-2012 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_028999_p208 YP_009217290.1 putative RNA polymerase beta subunit NC_028999 Pseudomonas phage PhiPA3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
NC_007623_p186 YP_418219.1 hypothetical protein NC_007623 Pseudomonas phage EL Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Elvirus.
MF285618_p100 ATA65435.1 RNA polymerase beta subunit MF285618 Serratia phage 2050HW Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_031039_p188 YP_009283093.1 DNA-directed RNA polymerase beta subunit NC_031039 Bacillus phage AR9 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_2986 48 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 40 2.46E-161 151.73
phrog_8223 14 no annotation unknown function 14 0 1000
phrog_4928 27 no annotation unknown function 14 6.05E-54 44.34
phrog_21542 4 no annotation unknown function 4 0 1000
phrog_30678 2 no annotation unknown function 2 0 1000
phrog_31672 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_14872 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 100.0 1E-109 1058-1410 / 1-355
phrog_18919 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 94.8 0.002 1028-1278 / 18-292
phrog_24349 no annotation unknown function 98.5 8E-11 1016-1384 / 616-963
phrog_3295 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 98.7 6.9E-12 1017-1410 / 5-474
phrog_38251 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 100.0 5.8E-75 186-949 / 146-905

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF00562.27 RNA polymerase Rpb2, domain 6 1.3E-44 1055-1432 / 1-434
PF04565.15 RNA polymerase Rpb2, domain 3 2.4E-13 964-1031 / 1-69

Annotations of the NCBI proteins of this PHROG


18:RNA polymerase beta subunit 13:DNA-directed RNA polymerase beta subunit 5:hypothetical protein 4:protein of an unannotated phage 1:virion-associated RNA polymerase beta subunit 1:beta/beta'-like virion-associated protein 1:DNA-directed RNA polymerase beta subunit 3 1:DNA-directed RNA polymerase beta subunit 5 1:phage DNA-directed RNA polymerase beta subunit 2 1:RNA polymerase subunit beta

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K03043 rpoB : DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] ko00230 Purine metabolism
ko00240 Pyrimidine metabolism
ko03020 RNA polymerase
78 4

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006351 transcription, DNA-templated
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity

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