PHROGS

Average length of proteins	Number of columns in the MSA	Number of conserved columns in the MSA
281.53	427	257

List of all proteins of this PHROG

PHROG prot ID	NCBI prot ID	NCBI prot annotation	Virus ID (click to view)	Virus name	Virus taxonomy
NC_028789_p16	YP_009198021.1	lower collar protein	NC_028789	Bacillus phage VMY22	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
KY821088_p22	ARM70171.1	lower collar protein	KY821088	Bacillus phage Harambe	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
NC_031032_p26	YP_009281738.1	lower collar protein	NC_031032	Bacillus phage Stitch	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
KY921761_p19	ARQ95222.1	lower collar protein	KY921761	Bacillus phage BeachBum	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
MF156577_p24	ASU04113.1	lower collar protein	MF156577	Bacillus phage Juan	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
NC_004165_p11	NP_690645.1	lower collar protein	NC_004165	Bacillus virus B103	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Picovirinae; unclassified Picovirinae.
NC_021336_p30	YP_008060119.1	lower collar	NC_021336	Bacillus phage MG-B1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
NC_011048_p17	YP_002004540.1	lower collar protein	NC_011048	Bacillus virus phi29	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Picovirinae; Salasvirus.
KY947509_p32	ARQ95566.1	lower collar protein	KY947509	Bacillus phage SerPounce	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
NC_031121_p29	YP_009292380.1	lower collar protein	NC_031121	Bacillus phage Aurora	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
MF156580_p24	ASU04187.1	hypothetical protein	MF156580	Bacillus phage RadRaab	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
NC_002649_p18	NP_073694.1	lower collar protein	NC_002649	Bacillus virus GA1 (GA-1)	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Picovirinae; Salasvirus.
NC_031015_p34	YP_009279602.1	lower collar protein	NC_031015	Bacillus phage Claudi	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
MF407276_p15	ASR76800.1	lower collar protein	MF407276	Bacillus phage vB_BveP-Goe6	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Picovirinae; Salasvirus; unclassified Salasvirus.
KX961631_p28	AOZ62237.1	lower collar protein	KX961631	Bacillus phage QCM11	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
KU831549_p15	AMR58247.1	lower collar protein	KU831549	Bacillus phage vB_BsuP-Goe1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Picovirinae; unclassified Picovirinae.
PZACG_p16	AAA88488.1	lower collar protein	PZACG	Bacillus phage PZA	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Picovirinae; Salasvirus; Bacillus virus phi29.
MF156578_p30	ASU04153.1	lower collar protein	MF156578	Bacillus phage KonjoTrouble	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
EU622808_p15	ACH57079.1	lower collar	EU622808	Bacillus phage Nf	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Picovirinae; unclassified Picovirinae.
NC_009643_p12	YP_001333665.1	lower collar protein	NC_009643	Actinomyces virus Av1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Picovirinae.
NC_031008_p16	YP_009278569.1	lower collar protein	NC_031008	Staphylococcus phage SLPW	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; Staphylococcus virus SLPW.
NC_007046_p6	YP_239466.1	putative lower collar protein	NC_007046	Staphylococcus phage 66	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; Staphylococcus virus 66.
KY442063_p16	AQT27838.1	lower collar protein	KY442063	Staphylococcus phage Andhra	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Andhravirus; Staphylococcus virus Andhra.
NC_031046_p16	YP_009283991.1	putative lower collar protein	NC_031046	Staphylococcus phage BP39	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; Staphylococcus virus BP39.
KY000084_p17	APD20943.1	hypothetical protein	KY000084	Staphylococcus phage SCH1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; Staphylococcus virus SCH1.
AF513032_p17	AAO83870.1	lower collar protein	AF513032	Staphylococcus virus 44AHJD (44AHJD)	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus.
NC_016565_p17	YP_004957432.1	putative lower collar protein	NC_016565	Staphylococcus phage S24-1	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; Staphylococcus virus S24-1.
KT945995_p5	ALO81013.1	lower collar protein	KT945995	Enterococcus phage vB_EfaP_IME199	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
KY471386_p17	AQT25390.1	lower collar protein	KY471386	Staphylococcus phage St 134	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Andhravirus; Staphylococcus virus St134.
KY000085_p18	APD20965.1	lower collar protein	KY000085	Staphylococcus phage SCH111	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; unclassified Rosenblumvirus.
NC_009875_p16	YP_001491541.1	putative lower collar protein	NC_009875	Staphylococcus phage SAP-2	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; Staphylococcus virus SAP2.
NC_004679_p18	NP_817334.1	putative lower collar protein	NC_004679	Staphylococcus phage P68	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; unclassified Rosenblumvirus.
MG766219_p16	AUS03391.1	lower collar protein	MG766219	Staphylococcus phage vB_SauP_phiAGO1.9	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; unclassified Rosenblumvirus.
NC_025467_p5	YP_009103961.1	putative lower collar protein	NC_025467	Enterococcus phage vB_Efae230P-4	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
AY954949_p6	AAX90659.1	ORF008	AY954949	Staphylococcus phage 66	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; Staphylococcus virus 66.
EU136189_p16	ABV44481.1	lower collar protein	EU136189	Staphylococcus phage SAP-2	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; Staphylococcus virus SAP2.
NC_028693_p23	YP_009191341.1	lower collar protein	NC_028693	Enterococcus phage vB_EfaP_IME195	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
AF513033_p18	AAO83892.1	lower collar protein	AF513033	Staphylococcus phage P68	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; unclassified Rosenblumvirus.
NC_023550_p17	YP_009004307.1	putative lower collar protein	NC_023550	Staphylococcus phage GRCS	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; Staphylococcus virus GRCS.
NC_004678_p17	NP_817312.1	putative lower collar protein	NC_004678	Staphylococcus phage 44AHJD (44AHJD)	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus.
AB626963_p17	BAL42325.1	putative lower collar protein	AB626963	Staphylococcus phage S13'	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; unclassified Rosenblumvirus.
MG766218_p16	AUS03382.1	lower collar protein	MG766218	Staphylococcus phage vB_SauP_phiAGO1.3	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; Staphylococcus virus phiAGO13.
NC_024149_p21	YP_009032598.1	lower collar protein	NC_024149	Lactoccocus phage WP-2	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Picovirinae; Negarvirus; Lactococcus virus WP2.
NC_004814_p14	NP_852020.1	putative lower collar protein	NC_004814	Streptococcus phage C1	Viruses; Caudovirales; Podoviridae; Picovirinae; Rosenblumvirus.
p386293	no NCBI prot ID	no annotation	VI_01028	Bacteroidia_gi_547233352	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.

PHROGs colocalized to this PHROG

PHROG	#Prot	Annotation	Category	#Neighbors	Probability	Score
phrog_2038	74	upper collar connector	connector	45	1.40E-170	160.97
phrog_287	429	minor tail protein	tail	15	1.11E-36	27.08
phrog_7458	16	tail spike protein	tail	10	2.31E-41	31.76
phrog_4775	28	pre-neck appendage protein	connector	6	9.31E-23	13.15
phrog_7158	16	no annotation	unknown function	3	1.70E-13	3.89
phrog_36917	2	no annotation	unknown function	2	0	1000
phrog_37178	2	no annotation	unknown function	2	0	1000

PHROGs similar to this PHROG

PHROG	Annotation	Category	Probability	Evalue	posQ/posS
phrog_26520	lower collar	tail	98.5	1.5E-10	63-257 / 63-215
phrog_27979	no annotation	unknown function	93.6	0.008	36-198 / 64-198
phrog_5472	lower collar	tail	99.9	2.1E-28	1-257 / 1-255

PFAMs similar to this PHROG

ID	Definition	Evalue	posQ/posS
no PFAM domain similar to this PHROG

Annotations of the NCBI proteins of this PHROG

39:lower collar protein 2:protein of an unannotated phage 2:lower collar 1:hypothetical protein

KEGG orthologous groups similar to this PHROG

ID	Name : Definition	Pathways	BestScore	#Hits
no KEGG group similar to this PHROG

GO terms in Uniprot proteins similar to this PHROG

ID	Definition
no GO term

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>NC_028789_p16
-----------MPVATEPLYRYIESFTIRNP-------------------------NMKR
NDRIEVGRKQLFDFDYPIFDEAYRNVFETHFIKEFYMREYGFETVGLFKLRLEIWLQTNM
PYFNKLFQSELIEYDPLINTETKRIHNKKNDRNQQDKRDSEENQKANTKTDIDVNSREHT
ESNRTGKFDSES----------NGTSEGTKKEDIDKTGKRTGNETGEGTSENFNRQLQSD
TPQERLQITPNEDGSGSIEYASKIQETKDKGKTTNKTDRSEDTTDKSNLTGDTTGKTHDE
TTGTST----------EDMKSDTTGNVHTTSNQDFTGDTNKNENLNSDIKSTEDFIEHIV
GKIGVLTYPEMIEKHRASFLRIERMIFKEMN-QLFMLTYL--------------------
-------
>KY821088_p22
-----------MASDTIELRRYIEAHSQYVE-------------------------GLST
RERIEIGRTKLFDFPYPLFSEDFRKDFETNVIRKFYFREIGFETIGRFKFELENWLLINM
PFYNKMFESELLEYDPLTNIKTIRDNSFDNKKDRNDNIDRSEDIKTNKEGKGLENTKDDG
TFTQDGTSDTNVKQDTNSTSTNDVDTSTTKNENTSKNSTRNGSENNNGSSEGFQRDLKSD
TPDNRLGITT-EDGKGVIEYASEIDESFKKDSSKSDTTSKDEVEETGNLDGTGTNKTTEK
GTGEDHTTGESKGKTHNEGTTSATGKKDRIETEEVTTGKTGNDKLNSLIKENQNFNETMY
GKTGAMTYQEMVMLYRDTFLRIEDMIHQEMNKKLFMLVYN--------------------
-------
>NC_031032_p26
-----------MALYSIELRRYIDHFTQYERP------------------------QPPI
KKRIEVGQPHLFDFDYPFFDESKRKDFERKWIRRFYMREVGFETIELFKFHLENWMNERM
PYYNQRFKSELIEFDPLLNTKMDRSKDKNIDGTRKDNIDTTGNK----KGTTALKTTENG
EFETHTANDGETKSNGTGKLTSDGTNDTTTDRTIEDIGSKKGNNQNVHDGTSFARTLDED
TPDGRLDITT-EDGKGIIRYASKINEVTGKDHANDEIHIDESTKKNSLDNTIDKVKTHDE
SNSETTASGESHDVGKATGTNSSTGTKDGTSNE----DVTGNSKLDQTTNQIMLEKENYV
GKIGVETYSEMLQKYRETFLSIETEIYDECEKKLFMWVY---------------------
-------
>KY921761_p19
-----------MASDTIELRRYIEAHSQYVE-------------------------GLST
RERIEIGRTKLFDFPYPLFSEDFRKDFETNVIRKFYFREIGFETIGRFKFELENWLLINM
PFYNKMFESELLEYDPLTNIKTIRDNSFDNKKDRNDNIDRSEDIKTNKEGKGLENTKDDG
TFTQDGTSDTNVKQDTNSTSTNDVDTSTTKNENTSKNSTRNGSENNNGSSEGFQRDLKSD
TPDNRLGITT-EDGKGVIEYASEIDESFKKDSSKSDTTSKDEVDETGKLDGTGTNKTTEK
GTGEDHTTGESKGKTHNEGTTSATGKKDRIETEEVTTGKTGNDKLNSLIKENQNFKETMY
GKTGTMTYQEMVMLYRDTFLRIEDMIHQEMNKKLFMLVYN--------------------
-------
>MF156577_p24
-----------MALYSIELRRYIDHFTQYERP------------------------QPSI
KKRIEVGQPHLFDFDYPFFDESKRKDFERKWIRRFYMREVGFETIELFKFHLENWMNERM
PYYNQRFKSELIEFDPLLNTRMDRSKDKNIDGTRKDNIDTTGNK----KGTTGLKTSENG
EFETHTANDGETKSNGTGKLTSDGTNDTTTERKVEDNGTKKGNNQNVHDGTNFARTLEED
TPDGRLDITT-EDGKGIIRYASKINEVTGKDHANDEIHIDESTTKNTTDNTTDKVKTHDQ
SNSETTASGESHDVGKATGTNSSTGTKDGTSNE----DVTGNSKLDQTTNQIMLEKENYV
GKIGVETYSEMLQKYRETFLSIETEIYNECEKKLFMWVY---------------------
-------
>NC_004165_p11
-----------MASYTMKLSTYIEMWSQYET-------------------------GLSM
AEKIEKGRPKLFDFQYPIFDESYRKVFETHFIRNFYMREIGFETEGLFKFNLETWLIINM
PYFNKLFESELIKYDPLENTRLNTTGNKKNDTERNDNRDTTGSMKADGKSNTKTS-----
-----------------------------DKTNATGSSKEDGKTTGSVTDDNFNRKIDSD
QPDSRLNLTT-NDGQGTLEYASAIEENNTNNKRNTTGTNNVT------------------
----------------SSAESESTGSGTSDTVTTDNANTTTNDKLNSQINNVEDYIESKI
GKSGTQSYASLVQDYRAALLRIEKRIFDEMQ-ELFMLVY---------------------
-------
>NC_021336_p30
------------MSYSIELRRYIDSFSQFECP------------------------PKSI
KDKINIGQPHLFDFEYPFFDESQRKDFERKWIRRFYMTQIGFETFELFKFHLENWMNEKM
PYYNQRFKSELIQFDPLKNTEMTRDKTKNIDGTRNDVIDETQNK----DGTFHIDTHDEG
KFQTNTTNDGTSHNEGTGNVVSDGTVDGKTDKTVEDIGSKKGNNRNTTDGTNFSRTLEED
TPDGRLDITT-EDGKGIIRYASKINEVTGKDHSEEVQSIDESTKKNGLDNTIEKTTSHDE
ANSKTTSDGTTKDVGSATGTNENDGFQDGRNNE----NKVGNSQLDQKTNEKAIENESYV
GKIGVETYSEMLQKYRETFIRIESEIYDECRKDLFMLVY---------------------
-------
>NC_011048_p17
-----------MSSYTMQLRTYIEMWSQGET-------------------------GLST
AEKIEKGRPKLFDFNYPIFDESYRTIFETHFIRNFYMREIGFETEGLFKFHLETWLMINM
PYFNKLFESELIKYDPLENTRVGVKSNTKNDTDRNDNRDVKQDLTSNGTSSTDAK-----
-----------------------------QNDTSKTTGNEKSSGSGSITDDNFKRDLNAD
TADDRLQLTT-KDGEGVLEYASQIEEHNENKKRDTKTSNTTD------------------
----------------TTSNTTGTSTLDSDSKTSNKANTTSNDKLNSQINSVEDYIEDRV
GKIGTQSYARLVMDYREALLRIEQRIFNEMQ-ELFMLVY---------------------
-------
>KY947509_p32
-----------MALYSIELRRYIDHFTQYERP------------------------QPPI
KKRIEVGQPHLFDFDYPFFDESKRKDFERKWIRRFYMREVGFETIELFKFHLENWMNERM
PYYNQRFKSELIEFDPLLNTKMDRSKDKNIDGTRKDNIDTTGNK----KGTTGLKTSENG
EFETHTANDGETKSNGTGKLTSDGTNDTTTERKVEDAGTKKGNNQNVHDGTSFARTLEEN
TPDGRLDITT-EDGKGIIRYASKINEVTGKEHANDEIHIDESTTKNTSDNTTDKVKTHDE
SVSETTSSGESHDVGKATGTNSSTGTKDGTSNE----DVTGNSKLDQTTNQIMLEKENYV
GKIGVETYSEMLQKYRETFLSIETEIYDECEKKLFMWVY---------------------
-------
>NC_031121_p29
-----------MALYSIELRRYIDHFTQYERP------------------------QPPI
KKRIEVGQPHLFDFDYPFFDESKRKDFERKWIRRFYMREVGFETIELFKFHLENWMNERM
PYYNQRFKSELIEFDPLLNTRMDRSKDKNIDGTRKDNIDTTGNK----KGTTGLKTTENG
EFETHTANDGETKNSGTGKLTSDGTSDTNTDRVIEDIGSKKGNNQNVHDGTNFARTLEED
TPDGRLDITT-EDGKGIIRYASKINEVTGKDHANDEIHIDESTKKNSSDNTIDKVKTHDQ
TNSETTSSGESHDVGKATGTNSSTGSKDGTSTE----DTTGNSKLDQTTNQIMLEKENYV
GKIGVETYSEMLQKYRETFLSIETEIYNECEAKLFMLVY---------------------
-------
>MF156580_p24
-----------MALYSIELRRYIDHFTQYERP------------------------QPPI
KKRIEVGQPHLFDFDYPFFDESKRKDFERKWIRRFYMREVGFETIELFKFHLENWMNERM
PYYNQRFKSELIEFDPLLNTKMDRSKDKNIDGTRKDNIDTTGNK----KGTTALKTTENG
EFETHTANDGETKSNGTGKLTSDGTNDTTTDRTIEDIGSKKGNNQNVHDGTSFARTLDED
TPDGRLDITT-EDGKGIIRYASKINEVTGKDHANDEIHIDESTKKNSLDNTIDKVKTHDE
SNSETTASGESHDVGKATGTNSSTGTKDGTSNE----DVTGNSKLDQTTNQIMLEKENYV
GKIGVETYSEMLQKYRETFLSIETEIYDECEKKLFMWVY---------------------
-------
>NC_002649_p18
-----------MASFTMPLREIVEWATQFDN-------------------------KLTR
NEKIEEGRKKLFDFFYPIE-TDYKKEFETKFIKHFYFREIGFETEGRFKFALEEWLNLNM
PYWNKIIESTHLDYNPLYNVDYKKDSDLIRNLDQVDNRVTDSKIENNGKASSESN-----
-------------------------------VITSEKGEANSIQDADRNSTAKKKRMFED
TPDGRLDIVN---DNNIIQYATDLTQEDSTDSVKDKIKNDS-------------------
-----------------SSKNDSTGNTTAEGKTNNITEGNNVDDFKSEKDEKQKLNDHIY
GKQGNVSYPQLIKEHREAILNVERMIFDQME-ELFMFVYN--------------------
-------
>NC_031015_p34
-----------MALYSIELRRYIDHFTQYERP------------------------QPSI
KKRIEVGQPHLFDFDYPFFDESKRKDFERKWIRRFYMREVGFETIELFKFHLENWMNERM
PYYNQRFKSELIEFDPLLNTRMDRSKDKNIDGTRKDNIDTTGNK----KGTTGLKTSENG
EFETHTANDGETKSNGTGKLTSDGTNDTTTDRKVEDNGTKKGNNQNVHDGTNFARTLEED
TPDGRLDITT-EDGKGIIRYASKINEVTGKDHANDEIHIDESTTKNTTDNTTDKVKTHDQ
SNSETTASGESHDVGKATGTNSSTGTKDGTSNE----DVTGNSKLDQTTNQIMLEKENYV
GKIGVETYSEMLQKYRETFLSIETEIYNECEAKLFMLVY---------------------
-------
>MF407276_p15
-----------MSSYTMQLRTYIEMWSQGET-------------------------GLST
AEKIEKGRPKLFDFNYPIFDESYRTIFETHFIRNFYMREIGFETEGLFKFHLETWLMINM
PYFNKLFESELIKYDPLENTRVGVKSNTKNDTDRNDNRDVKQDLTSNGTSSTDAK-----
-----------------------------QNDTSKTTGNEKSSGSGSITDDNFKRDLNAD
TADDRLQLTT-KDGEGVLEYASQIEEHNENKKRVTKTNNTTD------------------
----------------TTSTTTGTSTLDSDSKTSNKANTTSNDKLNSQINSVEDYIEDRV
GKIGTQSYARLVMDYREALLRIEQRIFNEMQ-ELFMLVY---------------------
-------
>KX961631_p28
-----------MALYSIELRRYIDHFTQYERP------------------------QPPI
KKRIEVGQPHLFDFDYPFFDESKRKDFERKWIRRFYMREVGFETIELFKFHLENWMNERM
PYYNQRFKSELIEFDPLLNTKMDRSKDKNIDGTRKDNIDTTGNK----KGTTGLKTSENG
EFETHTANDGETKNSGTGKLTSDGTNDTTTERNVEDTGTKKGNNQNVHDGTNFARTLEED
TPDGRLDITT-EDGKGIIRYASKINEVTGKDHANDEIHIDESTTKNTTDNTTDKVKTHDQ
SNSETTASGESHDVGKATGTNSSTGTKDGTSNE----DVTGNSKLDQTTNQIMLEKENYV
GKIGVETYSEMLQKYRETFLSIETEIYDECEKKLFMWVY---------------------
-------
>KU831549_p15
MFHVEHWAVKQMASYTMKLSTYIEMWSQYET-------------------------GLSM
SEKIEKGRPKLFDFHYPIFDESYRKVFETHFIRNFYMREVGFETEGLFKFNLETWLIINM
PYFNKLFESELIKYDPLENTRLNTTGNKKNDTERNDNRDTTGSMKADGKSNTKTS-----
-----------------------------DKTNASGSSKEDGKTTGSVTDDNFNRKIDSD
QPDSRLALTT-NDGKGTLEYASAIEENSTNNKRNTTGTNNVT------------------
----------------SSAKSESTGSGTSDTVTTDTANTTANDKLNSQINNVEDYIESKI
GKSGTQSYASLVQDYRAALLRIEKRIFDEMQ-ELFMLVY---------------------
-------
>PZACG_p16
-----------MSSYTMQLRTYIEMWSQGET-------------------------GLST
AEKIEKGRPKLFDFNYPIFDESYRTIFETHFIRNFYMREIGFETEGLFKFHLETWLMINM
PYFNKLFESELIKYDPLENTRVGVKSNTKNDTDRNDNRDVKQDLTSNGTSSTDAK-----
-----------------------------QNDTSKTTGNEKSSGSGSITDDNFKRDLNAD
TADDRLQLTT-KDGEGVLEYASQIEEHNENKKRDTKTSNTTD------------------
----------------TTSNTTGTSTLDSDSKTSNKANTTSNDKLNSQINSVEDYIEDRV
GKIGTQSYARLVMDYREALLRIEQRIFNEMQ-ELFMLVY---------------------
-------
>MF156578_p30
-----------MALYSIELRRYIDHFTQYERP------------------------QPPI
KKRIEVGQPHLFDFDYPFFDESKRKDFERKWIRRFYMREVGFETIELFKFHLENWMNERM
PYYNQRFKSELIEFDPLLNTRMDRSKDKNIDGTRKDNIDTTGNK----KGTTGLKTSENG
EFETHTANDGETKNSGTGKLTSDGTNDTTTERNVEDTGTKKGNNQNVHDGTSFARTLDED
TPDGRLDITT-EDGKGIIRYASKINEVTGKDHANDEIHIDESTTKNTTDNTTDKVKTHDQ
SNSETTASGESHDVGKATGTNSSTGTKDGTSNE----DVTGNSKLDQTTNQIMLEKENYV
GKIGVETYSEMLQKYRETFLSIETEIYNECEAKLFMLVY---------------------
-------
>EU622808_p15
MFHVEHWAVKQMASYTMKLSTYIEMWSQYET-------------------------GLSM
SEKIEKGRPKLFDFHYPIFDESYRKVFETHFIRNFYMREIGFETEGLFKFNLETWLIINM
PYFNKLFESELIKYDPLENTRLNTTGNKKNDTERNDNRDTTGSMKADGKSNTKTS-----
-----------------------------DKTKASGSSKEDGKTTGSVTDDNFNRKIDSD
QPDSRLALTT-NDGKGILEYASAIEENNTNNKRNTTGTNNVT------------------
----------------SSAESESTGSGTSDTVTTDSANTTTNDKLNSQINNVEDYIESKI
GKSGTQSYASLVQDYRAALLRIEKRIFDEMQ-ELFMLVY---------------------
-------
>NC_009643_p12
----------------------------------------------------MSVTTIML
RDVVKLTNDHIGLDNYPIFDESYRKTLNDRIKREYWLQEIAHETIDIFIWRMSLRMDLIM
PRYNRMYLAELQNTDPLEGNRHYSRTGQ--------------------------------
------------------------------DGRSQNSGINHQTGSGSGTNESKGRTVGSD
TPQTRLAGDG--------DYATSISDASTGGSSTSRNESDS-------------------
-------------------------------------------TSSSTSNYSNNQNSESW
GYSG--SKARAIAEYRSTLLNVDDLVIRELS-DLFMGIWDGDSTKTPGGLIGSGLIGYGI
GGYYGYW
>NC_031008_p16
-----------MARYTMTLFDFIKSELIKKGFNEFVN-NDKLTFYDDEFQFMQ--KMLKF
DKDVLAIVNEKVFKGFKLKDDLSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGFTE--------------------------------
-HNEDTTSN----------------TDETSNQ--------NATSLDNSTGMTANRNAYAS
LPQSEVNIDV---DNTTLQFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNAKRNQNQKGNAKGTQFS---------
--------KQYLIDNIDKVYDLRKKILNEFDKKCFLQIW---------------------
-------
>NC_007046_p6
-----------MARYTMTLYDFIKSELIKKGFNEFVN-DNKLTFYDDEFQFMQ--KMLKF
DKDVLAIVNEKVFKGFSLKDELSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGFTE--------------------------------
-HNEDTTSN----------------TDETSNQ--------NATSLDNSTGMTANRNAYVS
LPQSEVNIDV---DNTTLRFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNAKRNQNQKGNAKGTQFT---------
--------KQYLIDNIDKAYDLRKKILNEFDKKCFLQIW---------------------
-------
>KY442063_p16
---------------------------------------------------MQ--KMLYF
DDDVKQIVDHMFFKGFMFNDERIDRYFKESFTLRFLYREIGRQTVESFASQVLYITMTHE
DYIYRVYGSDMYKYIEQVTDTQSQDLGK--------------------------------
-AIENAIEQ----------------GQTKDRQQDKGHEEYKDYEDTITKSFDDNRTAEST
LPQSKVNIDV---DNTVLDYADTNTISRDKNTSETVSEK---------------------
-----------------TGTKDNTFDSLRNGESDTKRNTQSQNEMNRTGLT---------
--------KQYLIDNLQKLYSMRDTIFKTYDKECFLHIW---------------------
-------
>NC_031046_p16
-----------MARYTMTLYDFIKSELIKKGFNEFVN-NDKLTFYDDEFQFMQ--KMLKF
DKDVQVIVNEKVFKGFSLKNELSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGFTE--------------------------------
-HNEDTTNN----------------TDETSNQ--------NATSLDNSTGMTANRNAFAT
LPQSEVNIDV---DNTTLQFADNNTIDNGKSVNKSSS-----------------------
-----------------------------ESNQNAKRNQNQKGNAKGTQFT---------
--------KQYLIDNIDKAYDLRKKILNEFDKRCFLQIW---------------------
-------
>KY000084_p17
-----------MARYTMTLFDFIKSELIKKGFNEFVN-NDKLTFYDDEFQFMQ--KMLKF
DKDVLAIVNEKVFKGFKLKDDLSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGFTE--------------------------------
-HNEDTTNN----------------TDETSNQ--------NATSLDNSTGMTANRNAYAS
LPQSEVNIDV---DKTTLQFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNAKRNQNQKGNAKGTQFS---------
--------KQYLIDNIDKVYDLRKKILNEFDKKCFLQIW---------------------
-------
>AF513032_p17
-----------MARYTMTLYDFIKSELIKKGFNEFVN-DNKLTFYDDEFQFMQ--KMLKF
DKDVLAIVNEKVFKGFSLKDELSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGFTE--------------------------------
-HNEDTTSN----------------TDETSNQ--------NATSLDNSTGMTANRNAYVS
LPQSEVNIDV---DNTTLRFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNAKRNQNQKGNAKGTQFT---------
--------KQYLIDNIDKAYDLRKKILNEFDKKCFLQIW---------------------
-------
>NC_016565_p17
-----------MARYTMTLFDFIKSELIKKGFNEFVN-NDKLTFYDDEFQFMQ--KMLKF
DKDVLSIVNEKVFKGFKLKDDLSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGFTE--------------------------------
-HNEDTISN----------------TDETSNQ--------NATSLDNSTGMTANRNAYVS
LPQSEVNIDV---DNTTLRFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNAKRNQNQKGNAKGTQFS---------
--------KQYLIDNIDKVYDLRKKILNEFDKKCFLQIW---------------------
-------
>KT945995_p5
-------------------MQILRANLIKKGKNEFFN-ENKYTGNSKQHRFIQ--KALRF
DEDVEQIITEEVFADYHFPTKEVDHFFKKAFTNRFLNREIGRQTIEDFSSQVVFCSIIHE
QEIEAIYHNFLSALSNENKSK---GI----------------------------------
---------------------------------------SEHVSEHQSTSEGSDRSANTT
LPQDQVNLNL---DKHDMAFADDNSISKNNNQSNSNGK----------------------
------------------------------------------DTTNTENSA---------
--------TNYNADTFKKMQGLWNSYFDEYDRKCFLQTW---------------------
-------
>KY471386_p17
-------MVEKLSKHTTTLYEIIESELQRLGLNEFVN-NDRIHFNDSKHAFMQ--KMLYF
DDDVKNIVDRVFFKGFMFNDERIDRYFKESFTLRFLYREIGRQTVEAFASQVLYITMTHE
DYIYRVYGSDMYKYIEQVTDTQSTDIGK--------------------------------
-ALENAIEQ----------------GQTKDRQQDKGHEEYKDYEDTITKSFDDNRTAEST
LPQSKVNIDV---DNTVLDYADTNTISRDKNTSETVSEK---------------------
-----------------TGTKDNTFDSLRNGESDTKRNTESQNEMNRTGLT---------
--------KQYLIDNLQKLYSMRDTIFKTYDKECFLHIW---------------------
-------
>KY000085_p18
-----------MARYTMTLFDFIKSELIKKGFNEFVN-NDKLTFYDDEFQFMQ--KMLKF
DKDVLAIVNEKVFKGFKLKDDLSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGFTE--------------------------------
-HNEDTTNN----------------TDETSNQ--------NATSLDNSTGMTANRNAYAS
LPQSEVNIDV---DKTTLQFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNAKRNQNQKGNAKGTQFS---------
--------KQYLIDNIDKVYDLRKKILNEFDKKCFLQIW---------------------
-------
>NC_009875_p16
-----------MARYTMTLYDFIKSELIKKGFNEFVN-DNKLTFYDDDFQFMQ--KMLKF
DKDVLAIVNEKVFKGFSLKEDLSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGFTE--------------------------------
-HNEDTTNN----------------TDETSNQ--------NATSLDNSTGMTANRNAYVS
LPQSEVNIDV---DKTTLKFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNVKRNQNQKGNAKGTQFS---------
--------KQYLIDNIDKVYDLRKKILNEFDKKMFFTNLVKVENYG-------------I
-------
>NC_004679_p18
-----------MARYTMTLYDFIKSELIKKGFNEFVN-DNKLTFYDDEFQFMQ--KMLKF
DKDVLAIVNEKVFKGFSLKDELSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGFTE--------------------------------
-HNEDTTSN----------------TDETSNQ--------NATSLDNSTGMTANRNAYVS
LPQSEVNIDV---DNTTLRFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNAKRNQNQKGNAKGTQFT---------
--------KQYLIDNIDKAYDLRKKILNEFDKKCFLQIW---------------------
-------
>MG766219_p16
-----------MARYTMTLYDFIKSELIKKGFNEFVN-DNKLTFYDDEFQFMQ--KMLKF
DKDVLAIVNEKVFKGFSLKDELSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGYTE--------------------------------
-HNEDTTNN----------------TDETLNQ--------NATSLDNSTGMTANRNAYAS
LPQSEVNIDV---ENTTLQFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNSKRNQNQKGNAKGTQFT---------
--------KQYLIDNIDKAYDLRKKILNEFDKKCFLQIW---------------------
-------
>NC_025467_p5
-----------MGLITISLMDIIQTELLKKNKNEFYN-NGEYTGNNKKFQFIQ--KALRY
DEDVQEIVNDMFFMGYTFPNPEADKYIKKMFVNRFLNRQIGRQTVEDFASQVVYTSLSNE
QEMMVLFENYEDFIISNNSVT---SE----------------------------------
-----------------------------------------SINEGINESISQNRDLRST
LPQNQINLDL---NSFEMDYGDENNIAKSLDKSNNNNK----------------------
------------------------------------------Q--TTKTDS---------
--------KNYNASNLKAFRGAWDYYFKEYDRRCFLQVW---------------------
-------
>AY954949_p6
-----------MARYTMTLYDFIKSELIKKGFNEFVN-DNKLTFYDDEFQFMQ--KMLKF
DKDVLAIVNEKVFKGFSLKDELSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGFTE--------------------------------
-HNEDTTSN----------------TDETSNQ--------NATSLDNSTGMTANRNAYVS
LPQSEVNIDV---DNTTLRFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNAKRNQNQKGNAKGTQFT---------
--------KQYLIDNIDKAYDLRKKILNEFDKKCFLQIW---------------------
-------
>EU136189_p16
-----------MARYTMTLYDFIKSELIKKGFNEFVN-DNKLTFYDDDFQFMQ--KMLKF
DKDVLAIVNEKVFKGFSLKEDLSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGFTE--------------------------------
-HNEDTTNN----------------TDETSNQ--------NATSLDNSTGMTANRNAYVS
LPQSEVNIDV---DKTTLKFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNVKRNQNQKGNAKGTQFS---------
--------KQYLIDNIDKVYDLRKKILNEFDKKMFFTNLVKVENYG-------------I
-------
>NC_028693_p23
---------------------------------------------------------MRY
DEDVEKITTEVFFAGYTFPTPEVDKFIKKMFINKFLNRQIGRQTVEDFASQVVYTSLSYE
QEIEILYKNYENFVIHNNETE---SI----------------------------------
-----------------------------------------TKGTGSNESLSENRDLRST
LPQDKINLDL---NSFEMDYGDENNIAKSADKSTNNNE----------------------
------------------------------------------Q--TTVTNS---------
--------KSYDASALKAFSGAWDRYLKEYDRRCFLQTW---------------------
-------
>AF513033_p18
-----------MARYTMTLYDFIKSELIKKGFNEFVN-DNKLTFYDDEFQFMQ--KMLKF
DKDVLAIVNEKVFKGFSLKDELSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGFTE--------------------------------
-HNEDTTSN----------------TDETSNQ--------NATSLDNSTGMTANRNAYVS
LPQSEVNIDV---DNTTLRFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNAKRNQNQKGNAKGTQFT---------
--------KQYLIDNIDKAYDLRKKILNEFDKKCFLQIW---------------------
-------
>NC_023550_p17
-----------MARYTMTLYDFIKSELIKKGFNEFVN-DNKLTFYDDEFQFMQ--KMLKF
DKDVLAIVNEKVFKGFSLKDELSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGYTE--------------------------------
-HNEDTTNN----------------IDETSNQ--------NATSLDNSTGMTANRNAYAS
LPQGEVNIDV---ENTTLQFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNAKRNQNQKGNAKGTQFT---------
--------KQYLIDNIDKAYDLRKKILNEFDKKCFLQIW---------------------
-------
>NC_004678_p17
-----------MARYTMTLYDFIKSELIKKGFNEFVN-DNKLTFYDDEFQFMQ--KMLKF
DKDVLAIVNEKVFKGFSLKDELSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGFTE--------------------------------
-HNEDTTSN----------------TDETSNQ--------NATSLDNSTGMTANRNAYVS
LPQSEVNIDV---DNTTLRFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNAKRNQNQKGNAKGTQFT---------
--------KQYLIDNIDKAYDLRKKILNEFDKKCFLQIW---------------------
-------
>AB626963_p17
-----------MARYTMTLFDFIKSELIKKGFNEFVN-NDKLTFYDDEFQFMQ--KMLKF
DKDVLSIVNEKVFKGFKLKDDLSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGFTE--------------------------------
-HNEDTISN----------------TDETSNQ--------NATSLDNSTGMTANRNAYVS
LPQSEVNIDV---DNTTLRFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNAKRNQNQKGNAKGTQFS---------
--------KQYLIDNIDKVYDLRKKILNEFDKKCFLQIW---------------------
-------
>MG766218_p16
-----------MARYTMTLYDFIKSELIKKGFNEFVN-DNKLTFYDDEFQFMQ--KMLKF
DKDVLAIVNEKVFKGFSLKDELSDLLFKKSFTIHFLDREINRQTVEAFGMQVITVCITHE
DYLNVVYSSSEVEKYLQS-----QGYTE--------------------------------
-HNEDTTNN----------------TDETLNQ--------NATSLDNSTGMTANRNAYAS
LPQSEVNIDV---ENTTLQFADNNTIDNGKTVNKSSN-----------------------
-----------------------------ESNQNSKRNQNQKGNAKGTQFT---------
--------KQYLIDNIDKAYDLRKKILNEFDKKCFLQIW---------------------
-------
>NC_024149_p21
----------MSDKYTINLFSLISAELYRSGKNPKVN-NGYLTLKDKNYQFIY--KIMKY
DEDVQKIVNNSIFYGFTFNNPEMDIWFKKTFINRYLNNKLKNQTIEHMNILLVGYLEMHR
QGLELLWKNYETIFSGGS------------------------------------------
----------------------------------------SSITTGNKETENNGRAVAQT
NPQDAFNFNV---RDYNFDTVDAASGNNTLGTEKA-------------------------
---------------------------------------------STSNNT---------
--------KTYNVNDVEKTIAIYEKTFRQMKKLVFSKFY---------------------
-------
>NC_004814_p14
----------------MRLFELIYKEVVKNGYSPFRSPENRIVVFEDKAQIET--KIMMY
DEDVQKVVNELIFTGSKVNE-----DFREEFVNYFFNREPHWDSLYIFRAKLKGILKTKE
AVLNMLYLKSTELLLGESMSKS--------------------------------------
------------------------------EGHSSNENRSRDNSTNESNGENRGANAHST
NPDDVTDTDL---ETANLSYADNLDKSYNESVNVSHSKG---------------------
-----------------ISSSQ--G----------------SSNNNSNSTN---------
--------TQFNTKALEEYEAFKQKIFDELDIKLFSQLFYEGY-----------------
-------
>p386293 VI_01028
-----------MSNHTTTLRNIIYHYSQDNNPL---HPE-----EEKRYAFIRFEDEIGV
MERIEKARSKMLYNTNKFFDEEFRNAFFQQFCVDNMMREIEYETPEYFILKFNQNVSRWL
PVYNKLYESSLLELDKLKSYSR--------------------------------------
--------------------------------ESSRNGDRETSASGKSTSENNNKNVFDD
TPENRLTNAD---------YATTITVDESSGNG---------------------------
---------------------------------------------TTSSNGKEVYSENYK
ESGYNVPQAELILKYRETLMDVVGQFSDTVSRSLFLKIY---------------------
-------