phrog_32430 is made of 2 protein sequences and is annotated as "tRNA splicing ligase RtcB"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
137.5 139 139


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_024787_p60 YP_009055648.1 tRNA-splicing ligase NC_024787 Listeria phage LMTA-148 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus LMTA148.
NC_023006_p53 YP_008873229.1 hypothetical protein NC_023006 Pseudomonas phage PPpW-3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
no colocalized PHROGS                                                                                          

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 100.0 1E-56 6-136 / 257-395

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF01139.16 tRNA-splicing ligase RtcB 3.5E-37 9-138 / 276-435

Annotations of the NCBI proteins of this PHROG


1:tRNA-splicing ligase 1:hypothetical protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K14415 RTCB, rtcB : tRNA-splicing ligase RtcB [EC:6.5.1.3] no pathways 185 1

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0008452 RNA ligase activity
GO:0006396 RNA processing

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