phrog_3282 is made of 44 protein sequences and is annotated as "sigma factor"
Functional category: transcription regulation


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
131.7 304 128


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p366514 no NCBI prot ID no annotation VI_11348 Gammaproteobacteria_gi_544782651 Viruses.
NC_029066_p24 YP_009222794.1 transcriptional regulator NC_029066 Pseudomonas phage PS-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p60500 no NCBI prot ID no annotation VI_09040 Gammaproteobacteria_gi_485061947_17879_69738 Viruses.
p69246 no NCBI prot ID no annotation VI_03262 Gammaproteobacteria_gi_218888746_2690476_2740340 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p69319 no NCBI prot ID no annotation VI_03935 Gammaproteobacteria_gi_568151185_2648273_2698137 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p121748 no NCBI prot ID no annotation VI_03121 Gammaproteobacteria_gi_553786826 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_031091_p45 YP_009289275.1 LuxR family transcriptional regulator NC_031091 Pseudomonas phage MD8 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p270215 no NCBI prot ID no annotation VI_02596 Gammaproteobacteria_gi_422597474_64764_94809 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p148764 no NCBI prot ID no annotation VI_02539 Gammaproteobacteria_gi_313112493_870458_911458 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p434592 no NCBI prot ID no annotation VI_11894 Gammaproteobacteria_gi_557842493 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p364523 no NCBI prot ID no annotation VI_07450 Gammaproteobacteria_gi_490684834 Viruses.
p139391 no NCBI prot ID no annotation VI_03893 Gammaproteobacteria_gi_386062973_1698545_1740400 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p360071 no NCBI prot ID no annotation VI_09810 Gammaproteobacteria_gi_520926852 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p342878 no NCBI prot ID no annotation VI_07086 Gammaproteobacteria_gi_325271855 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p326219 no NCBI prot ID no annotation VI_07449 Gammaproteobacteria_gi_490683720 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p173524 no NCBI prot ID no annotation VI_09030 Gammaproteobacteria_gi_485055641_9395_48050 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p291885 no NCBI prot ID no annotation VI_11832 Gammaproteobacteria_gi_560461213_2552_29413 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p183917 no NCBI prot ID no annotation VI_07443 Gammaproteobacteria_gi_485473597_108249_146077 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p128073 no NCBI prot ID no annotation VI_03160 Gammaproteobacteria_gi_553796927_1389568_1432125 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p146879 no NCBI prot ID no annotation VI_03130 Gammaproteobacteria_gi_553790679_102935_144121 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Pseudomonas phage F10.
p55004 no NCBI prot ID no annotation VI_02635 Gammaproteobacteria_gi_409167680 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p414528 no NCBI prot ID no annotation VI_12000 Gammaproteobacteria_gi_566137579 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p223421 no NCBI prot ID no annotation VI_03133 Gammaproteobacteria_gi_553790695_610845_645347 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p184680 no NCBI prot ID no annotation VI_09784 Gammaproteobacteria_gi_458890088_0_37784 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Pseudomonas phage F10.
p229445 no NCBI prot ID no annotation VI_11884 Gammaproteobacteria_gi_558880442_0_33858 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p110751 no NCBI prot ID no annotation VI_08534 Gammaproteobacteria_gi_420137445 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_007805_p38 YP_001293382.1 Conserved hypothetical protein; putative transcriptional regulator, LuxR family NC_007805 Pseudomonas phage F10 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p128669 no NCBI prot ID no annotation VI_03089 Gammaproteobacteria_gi_553772211_915319_957830 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_030931_p10 YP_009275644.1 LuxR family transcriptional regulator NC_030931 Pseudomonas phage phi2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p316510 no NCBI prot ID no annotation VI_09795 Gammaproteobacteria_gi_520882301 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p133874 no NCBI prot ID no annotation VI_03157 Gammaproteobacteria_gi_553794552_4209918_4252193 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p421225 no NCBI prot ID no annotation VI_07562 Gammaproteobacteria_gi_482734287 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
KY707339_p42 ARM70503.1 hypothetical protein KY707339 Pseudomonas phage JBD68 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p149398 no NCBI prot ID no annotation VI_09053 Gammaproteobacteria_gi_485067185 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Pseudomonas phage F10.
p316459 no NCBI prot ID no annotation VI_09802 Gammaproteobacteria_gi_520906408 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p97990 no NCBI prot ID no annotation VI_11347 Gammaproteobacteria_gi_544782243 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Pseudomonas phage F10.
p29604 no NCBI prot ID no annotation VI_08598 Gammaproteobacteria_gi_398848570 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p232314 no NCBI prot ID no annotation VI_11791 Gammaproteobacteria_gi_550041947 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p25230 no NCBI prot ID no annotation VI_02623 Gammaproteobacteria_gi_389686655_1354908_1426703 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p193675 no NCBI prot ID no annotation VI_07595 Gammaproteobacteria_gi_394743162_165631_202524 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p210186 no NCBI prot ID no annotation VI_06665 Gammaproteobacteria_gi_302121827_40969_76805 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
KT898133_p37 ALN97557.1 LuxR family transcriptional regulator KT898133 Aeromonas phage phiARM81ld Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
p57005 no NCBI prot ID no annotation VI_03629 Gammaproteobacteria_gi_484083662 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p25167 no NCBI prot ID no annotation VI_09041 Gammaproteobacteria_gi_485061967 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_6742 18 no annotation unknown function 13 1.76E-54 44.88
phrog_4 3265 transcriptional repressor transcription regulation 12 4.63E-18 8.46
phrog_8933 12 no annotation unknown function 12 0 1000
phrog_1033 143 ParB-like partition protein DNA, RNA and nucleotide metabolism 7 9.56E-21 11.14
phrog_17810 5 no annotation unknown function 4 4.89E-21 11.43
phrog_20111 4 no annotation unknown function 3 5.79E-17 7.36
phrog_27325 3 no annotation unknown function 3 0 1000
phrog_27409 3 no annotation unknown function 2 6.76E-13 3.29

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_10300 transcriptional regulator transcription regulation 96.9 5.9E-06 15-78 / 118-181
phrog_11138 no annotation unknown function 91.7 0.03 17-61 / 91-136
phrog_1157 transposase integration and excision 93.9 0.0059 29-57 / 14-42
phrog_1190 RNA polymerase sigma factor transcription regulation 95.0 0.0016 18-62 / 138-183
phrog_1368 transcriptional regulator transcription regulation 92.4 0.02 29-57 / 25-53
phrog_1373 transcriptional regulator transcription regulation 93.1 0.012 29-54 / 41-66
phrog_13787 no annotation unknown function 91.8 0.029 13-61 / 118-165
phrog_1740 RNA polymerase sigma factor transcription regulation 97.0 3.5E-06 17-63 / 126-173
phrog_20467 HNH endonuclease DNA, RNA and nucleotide metabolism 94.9 0.0017 18-55 / 55-93
phrog_2328 transcriptional repressor transcription regulation 91.1 0.04 29-77 / 25-69
phrog_2655 excisionase integration and excision 92.5 0.019 33-55 / 8-30
phrog_268 no annotation unknown function 90.5 0.053 31-61 / 16-45
phrog_27555 transcriptional regulator transcription regulation 97.8 4.6E-08 13-82 / 127-198
phrog_309 terminase small subunit head and packaging 92.8 0.015 24-53 / 16-45
phrog_323 transcriptional regulator, D5-like transcription regulation 90.3 0.058 17-60 / 4-43
phrog_3470 no annotation unknown function 91.7 0.031 34-56 / 8-30
phrog_3502 no annotation unknown function 90.4 0.056 16-59 / 2-53
phrog_3512 sigma factor transcription regulation 95.3 0.00082 14-62 / 63-112
phrog_351 RNA polymerase sigma factor transcription regulation 96.6 2.6E-05 18-63 / 176-225
phrog_3642 HTH DNA binding protein DNA, RNA and nucleotide metabolism 93.1 0.012 18-51 / 6-39
phrog_3855 HTH DNA binding protein DNA, RNA and nucleotide metabolism 96.3 6.9E-05 18-57 / 65-104
phrog_3 transcriptional repressor transcription regulation 90.6 0.051 30-55 / 14-38
phrog_4779 transcriptional regulator transcription regulation 94.1 0.0051 31-74 / 13-56
phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism 94.4 0.0035 18-58 / 64-105
phrog_5536 no annotation unknown function 93.4 0.01 28-54 / 17-43
phrog_57 terminase small subunit head and packaging 92.6 0.017 32-60 / 2-30
phrog_6223 transcriptional repressor transcription regulation 94.3 0.004 19-51 / 4-36
phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 94.8 0.0019 16-55 / 51-91
phrog_66 excisionase and transcriptional regulator integration and excision 91.8 0.028 33-57 / 10-34
phrog_6831 transcriptional regulator transcription regulation 91.5 0.033 29-51 / 12-34
phrog_7061 HTH DNA binding protein DNA, RNA and nucleotide metabolism 91.6 0.032 23-53 / 35-65
phrog_7067 terminase small subunit head and packaging 93.8 0.0064 29-56 / 28-55
phrog_725 CII-like regulator transcription regulation 92.2 0.023 25-55 / 20-50
phrog_7676 no annotation unknown function 94.5 0.0032 29-56 / 13-40
phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 92.8 0.016 33-67 / 19-53
phrog_9759 DNA binding protein DNA, RNA and nucleotide metabolism 91.7 0.03 33-54 / 19-40

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF03472.14 Autoinducer binding domain 7.9E-11 19-128 / 1-111
PF07638.10 ECF sigma factor 6E-06 172-225 / 127-180
PF07374.10 Protein of unknown function (DUF1492) 8.6E-05 172-222 / 47-99
PF03333.12 Adhesin biosynthesis transcription regulatory protein 0.00018 175-225 / 35-86
PF06530.11 Phage antitermination protein Q 0.00026 181-226 / 65-111
PF05331.10 Protein of unknown function (DUF742) 0.00039 178-222 / 37-81
PF04297.13 Putative helix-turn-helix protein, YlxM / p13 like 0.00051 170-226 / 8-65
PF08281.11 Sigma-70, region 4 0.00097 175-221 / 6-53
PF04545.15 Sigma-70, region 4 0.0013 178-223 / 3-53
PF16264.4 SatD family (SatD) 0.0017 172-225 / 143-202
PF05263.10 Protein of unknown function (DUF722) 0.0023 172-223 / 74-133
PF02001.15 Protein of unknown function DUF134 0.0024 175-226 / 27-79
PF16509.4 TrfB plasmid transcriptional repressor 0.0027 176-225 / 12-62
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.0043 180-224 / 3-49

Annotations of the NCBI proteins of this PHROG


3:LuxR family transcriptional regulator 1:protein of an unannotated phage 1:transcriptional regulator 1:hypothetical protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K15852 luxR, vanR : LuxR family transcriptional regulator, transcriptional activator of the bioluminescence operon no pathways 213 1

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0003700 DNA binding transcription factor activity
GO:0006352 DNA-templated transcription, initiation
GO:0006355 regulation of transcription, DNA-templated
GO:0016987 sigma factor activity
GO:0003677 DNA binding
GO:0060567 negative regulation of DNA-templated transcription, termination

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