phrog_3295 is made of 44 protein sequences and is annotated as "RNA polymerase beta subunit"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
718.59 961 710


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
MF360957_p283 ASU00106.1 RNA polymerase beta subunit MF360957 Bacillus virus PBS1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_031039_p88 YP_009282993.1 DNA-directed RNA polymerase beta subunit NC_031039 Bacillus phage AR9 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_016163_p262 YP_004934495.1 DNA-directed RNA polymerase beta subunit,C-terminus NC_016163 Yersinia phage phiR1-37 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
KY499642_p220 AQT28161.1 putative DNA-directed RNA polymerase beta subunit KY499642 Vibrio phage pVa-21 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
NC_031043_p36 YP_009283525.1 putative DNA-directed RNA polymerase beta subunit NC_031043 Erwinia phage vB_EamM_Phobos Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
NC_031127_p42 YP_009293019.1 putative DNA-directed RNA polymerase beta subunit NC_031127 Erwinia phage vB_EamM_Huxley Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
KU726251_p35 AMR59686.1 putative DNA-directed RNA polymerase beta subunit 2 KU726251 Enterobacteria phage SEGD1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Seoulvirus; Salmonella virus SPN3US.
KX397371_p42 ANZ49961.1 putative DNA-directed RNA polymerase beta subunit KX397371 Erwinia phage vB_EamM_Parshik Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
NC_021531_p35 YP_008125775.1 putative DNA-directed RNA polymerase beta subunit 1 NC_021531 Cronobacter phage CR5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
NC_027402_p34 YP_009153328.1 putative DNA-directed RNA polymerase beta subunit 2 NC_027402 Salmonella phage SPN3US Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Seoulvirus.
NC_031107_p39 YP_009290669.1 putative DNA-directed RNA polymerase beta subunit NC_031107 Erwinia phage vB_EamM_Asesino Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus.
NC_031010_p38 YP_009278651.1 putative DNA-directed RNA polymerase beta subunit NC_031010 Erwinia phage vB_EamM_Kwan Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_031126_p39 YP_009292739.1 putative DNA-directed RNA polymerase beta subunit NC_031126 Erwinia phage vB_EamM_ChrisDB Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
KX397373_p37 ANZ50474.1 putative DNA-directed RNA polymerase beta subunit KX397373 Erwinia phage vB_EamM_Stratton Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus; unclassified Erskinevirus.
NC_031007_p36 YP_009278348.1 putative DNA-directed RNA polymerase beta subunit NC_031007 Erwinia phage vB_EamM_EarlPhillipIV Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Derbicusvirus; unclassified Derbicusvirus.
NC_031120_p37 YP_009292117.1 putative DNA-directed RNA polymerase beta subunit NC_031120 Erwinia phage vB_EamM_Caitlin Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; unclassified Machinavirus.
KX397370_p41 ANZ49688.1 putative DNA-directed RNA polymerase beta subunit KX397370 Erwinia phage vB_EamM_Machina Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Machinavirus; Erwinia virus Machina.
NC_019929_p216 YP_007237866.1 hypothetical protein NC_019929 Erwinia phage phiEaH2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Erskinevirus.
MG655268_p249 AUG86356.1 putative DNA directed RNA polymerase beta subunit MG655268 Erwinia phage vB_EamM_Desertfox Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Desertfox.
NC_028950_p209 YP_009213058.1 hypothetical protein NC_028950 Ralstonia phage RSL2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chiangmaivirus.
NC_023557_p248 YP_009005040.1 hypothetical protein NC_023557 Erwinia phage Ea35-70 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus.
AP017924_p275 BAW19249.1 putative DNA-directed RNA polymerase subunit beta AP017924 Ralstonia phage RP12 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; Ralstonia virus RP12.
MF459646_p43 ASU03627.1 putative DNA directed RNA polymerase beta subunit MF459646 Erwinia phage vB_EamM_RisingSun Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Risingsunvirus; Erwinia virus Risingsun.
KU886224_p247 ANH52028.1 putative DNA directed RNA polymerase beta subunit KU886224 Erwinia phage vB_EamM_RAY Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus RAY.
MG720308_p81 AUR80928.1 hypothetical protein MG720308 Vibrio phage Aphrodite1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Aphroditevirus; Vibrio virus Aphrodite1.
KU886223_p252 ANH51711.1 putative DNA directed RNA polymerase beta subunit KU886223 Erwinia phage vB_EamM_Simmy50 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Simmy50.
MF042360_p112 ARV76743.1 putative DNA-directed RNA polymerase subunit beta MF042360 Pseudomonas phage Phabio Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
NC_007623_p38 YP_418071.1 hypothetical protein NC_007623 Pseudomonas phage EL Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Elvirus.
MG655270_p253 AUG87002.1 putative DNA directed RNA polymerase beta subunit MG655270 Erwinia phage vB_EamM_Mortimer Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
NC_016571_p73 YP_004957980.1 RNA polymerase beta subunit NC_016571 Pseudomonas phage OBP Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
AP017925_p272 BAW19535.1 putative DNA-directed RNA polymerase subunit beta AP017925 Ralstonia phage RP31 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ripduovirus; unclassified Ripduovirus.
NC_010821_p127 YP_001956853.1 hypothetical protein NC_010821 Pseudomonas phage 201phi2-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phikzvirus; unclassified Phikzvirus.
KU886222_p251 ANJ65063.1 putative DNA directed RNA polymerase beta subunit KU886222 Erwinia phage vB_EamM_Special G Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus SpecialG.
MF459647_p43 ASU03872.1 putative DNA directed RNA polymerase beta subunit MF459647 Erwinia phage vB_EamM_Joad Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Risingsunvirus; unclassified Risingsunvirus.
KU886225_p254 ANH52353.1 putative DNA directed RNA polymerase beta subunit KU886225 Erwinia phage vB_EamM_Deimos-Minion Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; Erwinia virus Deimos.
NC_028899_p215 YP_009208019.1 putative RNA polymerase beta subunit NC_028899 Ralstonia phage RSF1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Chiangmaivirus.
NC_023610_p8 YP_009010061.1 putative DNA directed RNA polymerase beta subunit NC_023610 Erwinia phage PhiEaH1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Iapetusvirus; Erwinia virus EaH1.
AP017972_p115 BAW98324.1 phage protein AP017972 Vibrio phage pTD1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tidunavirus; Vibrio virus pTD1.
MG655269_p251 AUG86678.1 putative DNA directed RNA polymerase beta subunit MG655269 Erwinia phage vB_EamM_MadMel Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
NC_017975_p157 YP_006383437.1 hypothetical protein NC_017975 Halocynthia phage JM-2012 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
MF285618_p327 ATA65662.1 putative DNA-directed RNA polymerase beta subunit MF285618 Serratia phage 2050HW Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
MF063068_p65 ARV77236.1 hypothetical protein MF063068 Pseudomonas phage Noxifer Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Noxifervirus; Pseudomonas virus Noxifer.
MG655267_p249 AUG86036.1 putative DNA directed RNA polymerase beta subunit MG655267 Erwinia phage vB_EamM_Bosolaphorus Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Agricanvirus; unclassified Agricanvirus.
KC131130_p93 AGB07207.1 hypothetical protein KC131130 Vibrio phage VP4B Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tidunavirus; Vibrio virus VP4B.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_3015 48 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 40 3.01E-174 164.64
phrog_13509 7 no annotation unknown function 7 0 1000
phrog_33744 2 no annotation unknown function 2 0 1000
phrog_32057 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_14872 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 98.4 1.9E-10 47-472 / 2-353
phrog_18919 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 100.0 8.4E-81 2-412 / 5-393
phrog_23982 RNA polymerase DNA, RNA and nucleotide metabolism 100.0 4.7E-62 420-702 / 1-299
phrog_24349 no annotation unknown function 99.7 3.3E-21 7-661 / 619-1112(1191)
phrog_3148 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 98.8 1.7E-12 5-474 / 1017-1410(1413)
phrog_33452 no annotation unknown function 92.8 0.015 381-445 / 157-219

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF00562.27 RNA polymerase Rpb2, domain 6 2.6E-56 61-637 / 2-515
PF04560.19 RNA polymerase Rpb2, domain 7 7.9E-17 648-730 / 1-76

Annotations of the NCBI proteins of this PHROG


13:DNA-directed RNA polymerase beta subunit 11:DNA directed RNA polymerase beta subunit 7:hypothetical protein 3:DNA-directed RNA polymerase subunit beta 3:RNA polymerase beta subunit 3:protein of an unannotated phage 2:DNA-directed RNA polymerase beta subunit 2 1:DNA-directed RNA polymerase beta subunit,C-terminus 1:DNA-directed RNA polymerase beta subunit 1

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K03043 rpoB : DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] ko00230 Purine metabolism
ko00240 Pyrimidine metabolism
ko03020 RNA polymerase
118 18

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006351 transcription, DNA-templated
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity

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