phrog_3339 is made of 43 protein sequences and is annotated as "homing endonuclease"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
545.14 978 535


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
MF001354_p124 ASZ76141.1 putative Hef-like homing endonuclease MF001354 Salmonella phage SG1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Tequatrovirus; unclassified Tequatrovirus.
NC_028820_p176 YP_009200437.1 hypothetical protein NC_028820 Yersinia phage vB_YenM_TG1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tegunavirus.
KY593455_p197 ARB05971.1 hypothetical protein KY593455 Yersinia phage fHe-Yen9-01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tegunavirus; unclassified Tegunavirus.
NC_019909_p232 YP_007236065.1 hypothetical protein NC_019909 Yersinia phage phiR1-RT Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tegunavirus.
NC_014663_p227 YP_004010364.1 putative Hef-like homing endonuclease NC_014663 Acinetobacter phage Acj9 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; unclassified Tevenvirinae.
NC_028820_p230 YP_009200491.1 hypothetical protein NC_028820 Yersinia phage vB_YenM_TG1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tegunavirus.
NC_019909_p177 YP_007236010.1 hypothetical protein NC_019909 Yersinia phage phiR1-RT Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tegunavirus.
MF001355_p8 ASZ76294.1 putative Hef-like homing endonuclease MF001355 Proteus phage PM2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; unclassified Tevenvirinae.
MG696114_p241 AUM58599.1 Hef-like homing endonuclease MG696114 Proteus phage phiP4-3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; unclassified Tevenvirinae.
NC_015250_p179 YP_004300760.1 putative Hef-like homing endonuclease NC_015250 Acinetobacter virus 133 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae.
NC_028762_p30 YP_009195448.1 Hef-like homing endonuclease NC_028762 Proteus phage vB_PmiM_Pm5461 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; unclassified Tevenvirinae.
HM246720_p11 AEF56746.1 Hef HM246720 Campylobacter virus IBB35 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Eucampyvirinae; Firehammervirus.
NC_019526_p39 YP_007007194.1 hypothetical protein NC_019526 Enterobacteria phage vB_KleM-RaK2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Alcyoneusvirus; Klebsiella virus RaK2.
HM246720_p10 AEF56745.1 Hef HM246720 Campylobacter virus IBB35 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Eucampyvirinae; Firehammervirus.
NC_027399_p3 YP_009153143.1 hypothetical protein NC_027399 Klebsiella phage K64-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Alcyoneusvirus; Klebsiella virus K64-1.
NC_027996_p53 YP_009168990.1 Possible homing endonuclease NC_027996 Campylobacter virus CPt10 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Firehammervirus.
NC_027997_p54 YP_009169188.1 Possible homing endonuclease NC_027997 Campylobacter virus CP220 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Firehammervirus.
NC_019925_p171 YP_007237493.1 putative homing endonuclease F-LimX NC_019925 Dickeya virus Limestone Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus.
KY942056_p22 ASD51209.1 putative homing endonuclease F-LimIII KY942056 Dickeya phage JA15 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus; unclassified Limestonevirus.
KY942057_p21 ASD51407.1 putative homing endonuclease F-LimIII KY942057 Dickeya phage XF4 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus; unclassified Limestonevirus.
NC_025452_p190 YP_009103030.1 hypothetical protein NC_025452 Dickeya phage RC-2014 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus.
KY942057_p165 ASD51551.1 putative homing endonuclease F-LimX KY942057 Dickeya phage XF4 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus; unclassified Limestonevirus.
KY942056_p169 ASD51356.1 putative homing endonuclease F-LimX KY942056 Dickeya phage JA15 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus; unclassified Limestonevirus.
KM209228_p26 AIM51406.1 hypothetical protein KM209228 Dickeya phage phiD3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus; Dickeya virus Limestone.
NC_019925_p24 YP_007237346.1 putative homing endonuclease F-LimIII NC_019925 Dickeya virus Limestone Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus.
MG266157_p22 ATW62028.1 putative homing endonuclease MG266157 Dickeya phage PP35 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus; unclassified Limestonevirus.
MG266157_p135 ATW62139.1 putative homing endonuclease MG266157 Dickeya phage PP35 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus; unclassified Limestonevirus.
KM209228_p134 AIM51295.1 hypothetical protein KM209228 Dickeya phage phiD3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus; Dickeya virus Limestone.
KY942056_p134 ASD51321.1 putative homing endonuclease F-LimVII KY942056 Dickeya phage JA15 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus; unclassified Limestonevirus.
NC_019925_p137 YP_007237459.1 putative homing endonuclease F-LimVII NC_019925 Dickeya virus Limestone Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus.
KY942057_p132 ASD51518.1 putative homing endonuclease F-LimVII KY942057 Dickeya phage XF4 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus; unclassified Limestonevirus.
NC_025452_p110 YP_009102950.1 hypothetical protein NC_025452 Dickeya phage RC-2014 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus.
KM209228_p142 AIM51293.1 hypothetical protein KM209228 Dickeya phage phiD3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus; Dickeya virus Limestone.
MG266157_p143 ATW62147.1 putative homing endonuclease MG266157 Dickeya phage PP35 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus; unclassified Limestonevirus.
MG428992_p60 AUG88195.1 hypothetical protein MG428992 Salmonella phage Mutine Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Cvivirinae; Kuttervirus; unclassified Kuttervirus.
KY942056_p143 ASD51330.1 putative homing endonuclease F-LimVIII KY942056 Dickeya phage JA15 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus; unclassified Limestonevirus.
NC_019925_p145 YP_007237467.1 putative homing endonuclease F-LimVIII NC_019925 Dickeya virus Limestone Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Aglimvirinae; Limestonevirus.
KY914485_p149 ARK07968.1 hypothetical protein KY914485 Aeromonas phage phiA8-29 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; unclassified Ackermannviridae.
NC_025422_p179 YP_009098937.1 homing endonuclease NC_025422 Caulobacter phage Cr30 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_027399_p40 YP_009153180.1 putative Hef-like homing endonuclease NC_027399 Klebsiella phage K64-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Alcyoneusvirus; Klebsiella virus K64-1.
NC_019526_p158 YP_007007313.1 putative Hef-like homing endonuclease NC_019526 Enterobacteria phage vB_KleM-RaK2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Alcyoneusvirus; Klebsiella virus RaK2.
NC_019526_p134 YP_007007289.1 putative homing endonuclease NC_019526 Enterobacteria phage vB_KleM-RaK2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Alcyoneusvirus; Klebsiella virus RaK2.
NC_027399_p35 YP_009153175.1 putative homing endonuclease NC_027399 Klebsiella phage K64-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Alcyoneusvirus; Klebsiella virus K64-1.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_232 491 baseplate wedge subunit tail 6 3.12E-15 5.63
phrog_230 496 baseplate tail tube cap tail 6 3.35E-15 5.6
phrog_519 261 no annotation unknown function 5 1.80E-14 4.87
phrog_138 688 major head protein head and packaging 5 6.14E-12 2.33
phrog_4050 34 no annotation unknown function 3 6.22E-13 3.33
phrog_3650 39 no annotation unknown function 3 1.10E-12 3.08
phrog_18112 5 recombinase other 2 2.28E-12 2.76

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_12131 homing endonuclease DNA, RNA and nucleotide metabolism 97.0 4E-06 131-216 / 87-172
phrog_13076 endonuclease DNA, RNA and nucleotide metabolism 93.5 0.0093 247-337 / 15-119
phrog_1384 Mom-like DNA modification protein other 98.3 4.8E-10 362-491 / 4-148
phrog_15137 endonuclease DNA, RNA and nucleotide metabolism 94.3 0.0039 77-153 / 39-108
phrog_27771 no annotation unknown function 96.1 0.00011 266-337 / 451-530
phrog_29804 no annotation unknown function 100.0 1.6E-47 278-533 / 273-531
phrog_4538 no annotation unknown function 95.2 0.00097 242-331 / 197-291
phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 99.8 4.8E-25 241-376 / 174-312
phrog_9084 homing endonuclease DNA, RNA and nucleotide metabolism 94.9 0.0017 246-330 / 5-100
phrog_9902 no annotation unknown function 94.1 0.0051 242-334 / 71-154

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF04480.11 Protein of unknown function (DUF559) 8.8E-07 346-449 / 12-105
PF13527.6 Acetyltransferase (GNAT) domain 4.3E-05 495-568 / 51-132
PF12568.7 Acetyltransferase (GNAT) domain 6.1E-05 493-571 / 42-126
PF02474.14 Nodulation protein A (NodA) 7.1E-05 495-570 / 59-141
PF00765.16 Autoinducer synthase 7.8E-05 515-573 / 89-156
PF08444.9 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region 0.00011 493-574 / 3-83
PF06852.11 Protein of unknown function (DUF1248) 0.00013 497-575 / 55-141
PF17013.4 Putative acetyl-transferase 0.00015 516-573 / 70-136
PF09390.9 Protein of unknown function (DUF1999) 0.00016 494-572 / 58-151
PF03852.14 DNA mismatch endonuclease Vsr 0.00021 347-401 / 19-70
PF13523.5 Acetyltransferase (GNAT) domain 0.00022 493-572 / 48-144
PF13508.6 Acetyltransferase (GNAT) domain 0.00058 494-568 / 8-85
PF12746.6 GNAT acetyltransferase 0.00065 496-572 / 172-248
PF11124.7 Inorganic phosphate transporter Pho86 0.0007 490-573 / 155-256
PF00583.24 Acetyltransferase (GNAT) family 0.00068 494-566 / 38-115
PF10881.7 Protein of unknown function (DUF2726) 0.00079 378-445 / 57-122
PF14542.5 GCN5-related N-acetyl-transferase 0.00078 496-568 / 6-76
PF13673.6 Acetyltransferase (GNAT) domain 0.00079 492-572 / 34-112
PF13420.6 Acetyltransferase (GNAT) domain 0.0011 497-577 / 60-143
PF05301.10 GNAT acetyltransferase, Mec-17 0.0017 498-573 / 78-167
PF13718.5 GNAT acetyltransferase 2 0.0018 497-547 / 74-130
PF13302.6 Acetyltransferase (GNAT) domain 0.0017 497-567 / 67-140
PF11039.7 Protein of unknown function (DUF2824) 0.0018 491-574 / 39-124
PF04958.11 Arginine N-succinyltransferase beta subunit 0.0027 515-573 / 117-186
PF03884.13 DNA gyrase inhibitor YacG 0.0031 199-244 / 2-43
PF01233.18 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 0.0029 491-550 / 73-150
PF08445.9 FR47-like protein 0.0035 515-571 / 21-82

Annotations of the NCBI proteins of this PHROG


13:hypothetical protein 8:Hef-like homing endonuclease 6:homing endonuclease 3:homing endonuclease F-LimX 3:homing endonuclease F-LimIII 3:homing endonuclease F-LimVII 2:homing endonuclease F-LimVIII 2:Hef 2:Possible homing endonuclease 1:protein of an unannotated phage

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0009877 nodulation
GO:0016740 transferase activity
GO:0071929 alpha-tubulin acetylation
GO:0016746 transferase activity, transferring acyl groups
GO:0006298 mismatch repair
GO:0005829 cytosol
GO:0006527 arginine catabolic process
GO:0005874 microtubule
GO:0004519 endonuclease activity
GO:0008270 zinc ion binding
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
GO:0004379 glycylpeptide N-tetradecanoyltransferase activity
GO:0019799 tubulin N-acetyltransferase activity
GO:0008791 arginine N-succinyltransferase activity

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