phrog_3419 is made of 42 protein sequences and is annotated as "rolling circle DNA replication initiation"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
295.43 448 296


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p439112 no NCBI prot ID no annotation VI_05608 Betaproteobacteria_gi_430025539_9934_18290 Viruses.
NC_008574_p12 YP_863916.1 hypothetical protein NC_008574 Ralstonia phage RSM1 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Habenivirus.
p426823 no NCBI prot ID no annotation VI_01086 Betaproteobacteria_gi_241661625_2269330_2280478 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; unclassified Inoviridae; Ralstonia phage 1 NP-2014.
p414129 no NCBI prot ID no annotation VI_05565 Betaproteobacteria_gi_485458402_20704_33160 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Inovirus; unclassified Inovirus.
MF716957_p11 ATW64834.1 putative rolling circle DNA replication initiation protein MF716957 Ralstonia virus RSIBR1 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Habenivirus; unclassified Habenivirus.
NC_023586_p1 YP_009008119.1 rolling circle DNA replication initiation protein NC_023586 Ralstonia phage 1 NP-2014 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; unclassified Inoviridae.
p437365 no NCBI prot ID no annotation VI_05501 Betaproteobacteria_gi_83746828_73871_83566 Viruses.
KX179905_p11 ANO57666.1 putative rolling circle DNA replication initiation protein KX179905 Ralstonia phage Rs551 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Habenivirus; Ralstonia virus RS551.
NC_025454_p12 YP_009103107.1 hypothetical protein NC_025454 Ralstonia phage RS603 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Habenivirus.
p439127 no NCBI prot ID no annotation VI_01102 Betaproteobacteria_gi_187927112_2648175_2656505 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae.
p399686 no NCBI prot ID no annotation VI_01090 Betaproteobacteria_gi_523408232_1103953_1118061 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Inovirus; unclassified Inovirus.
NC_011399_p12 YP_002290963.1 hypothetical protein NC_011399 Ralstonia phage RSM3 (Ralstonia solanacearum phage RSM3) Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Habenivirus.
AB981170_p12 BAP28162.1 hypothetical protein AB981170 Ralstonia phage RSMSuper Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Habenivirus; Ralstonia virus RSM3; Ralstonia phage RSM3.
p438129 no NCBI prot ID no annotation VI_01101 Betaproteobacteria_gi_187925958_648026_657093 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae.
p417815 no NCBI prot ID no annotation VI_05577 Betaproteobacteria_gi_374370688_23026_35095 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae.
p442373 no NCBI prot ID no annotation VI_05518 Betaproteobacteria_gi_149148298_4988_10027 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae.
p439409 no NCBI prot ID no annotation VI_05528 Betaproteobacteria_gi_149156612_7236_15377 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae.
p383447 no NCBI prot ID no annotation VI_05552 Betaproteobacteria_gi_485035531 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Peduovirus.
p441601 no NCBI prot ID no annotation VI_05507 Betaproteobacteria_gi_149131732_174_6650 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Inovirus; unclassified Inovirus.
p384345 no NCBI prot ID no annotation VI_01080 Betaproteobacteria_gi_152979768_2003821_2019674 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae.
p438993 no NCBI prot ID no annotation VI_01105 Betaproteobacteria_gi_526456747_1067646_1076055 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Inovirus.
p434540 no NCBI prot ID no annotation VI_05515 Betaproteobacteria_gi_149147508_19387_29661 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae.
p437994 no NCBI prot ID no annotation VI_01065 Betaproteobacteria_gi_505733775_245011_254189 Viruses.
p442367 no NCBI prot ID no annotation VI_05517 Betaproteobacteria_gi_149148269 Viruses.
p423680 no NCBI prot ID no annotation VI_05514 Betaproteobacteria_gi_149147175_2605_14057 Viruses.
p439187 no NCBI prot ID no annotation VI_01123 Betaproteobacteria_gi_53717639_3967707_3975962 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Inovirus.
p416187 no NCBI prot ID no annotation VI_05504 Betaproteobacteria_gi_134283347_137806_150093 Viruses.
p440001 no NCBI prot ID no annotation VI_05540 Betaproteobacteria_gi_171317890_6289_13945 Viruses.
p416671 no NCBI prot ID no annotation VI_05724 Betaproteobacteria_gi_558013854_21777_34017 Viruses.
p439681 no NCBI prot ID no annotation VI_01075 Betaproteobacteria_gi_83718394_3724103_3732010 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Inovirus.
p440723 no NCBI prot ID no annotation VI_05606 Betaproteobacteria_gi_430025423_31365_38532 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae.
p431901 no NCBI prot ID no annotation VI_01078 Betaproteobacteria_gi_126438353_3804855_3815466 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae.
p368338 no NCBI prot ID no annotation VI_01092 Betaproteobacteria_gi_340785197_2493510_2511229 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae.
p437244 no NCBI prot ID no annotation VI_01068 Betaproteobacteria_gi_254028270 Viruses.
p439397 no NCBI prot ID no annotation VI_05621 Betaproteobacteria_gi_490769071_294376_302519 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae.
NC_005131_p9 NP_932305.2 ORF9 NC_005131 Ralstonia phage p12J Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; unclassified Inoviridae.
p403790 no NCBI prot ID no annotation VI_01103 Betaproteobacteria_gi_187927112_1481834_1495435 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; unclassified Inoviridae; Ralstonia phage p12J.
NC_001270_p5 NP_052055.2 putative rep protein NC_001270 Spiroplasma phage SVTS2 (Spiroplasma phage C1/TS2) Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Plectroviridae; Suturavirus; Spiroplasma virus SVTS2.
AF133242_p5 AAF18311.2 putative rep protein AF133242 Spiroplasma phage SVTS2 (Spiroplasma phage C1/TS2) Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Plectroviridae; Suturavirus; Spiroplasma virus SVTS2.
AJ969242_p1 CAI94586.1 replicative protein AJ969242 Spiroplasma phage SVGII3 Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; unclassified Inoviridae.
p438324 no NCBI prot ID no annotation VI_06328 Flavobacteriia_gi_483493097_1574_10450 Viruses.
p412314 no NCBI prot ID no annotation VI_04368 Bacilli_gi_75760807 Viruses.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_197 537 Zot-like toxin moron, auxiliary metabolic gene and host takeover 11 2.80E-28 18.67
phrog_10506 10 no annotation unknown function 6 1.46E-28 18.96
phrog_25766 3 no annotation unknown function 3 0 1000
phrog_23279 3 no annotation unknown function 2 1.71E-13 3.89
phrog_29906 2 no annotation unknown function 2 0 1000
phrog_35743 2 no annotation unknown function 2 0 1000

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_10883 no annotation unknown function 92.5 0.019 103-216 / 34-160
phrog_19464 no annotation unknown function 97.3 9.5E-07 1-102 / 1-89
phrog_3584 replication initiation protein DNA, RNA and nucleotide metabolism 99.5 6.1E-18 43-242 / 8-198
phrog_36406 no annotation unknown function 98.3 6.7E-10 208-275 / 1-80
phrog_713 DNA replication initiation DNA, RNA and nucleotide metabolism 95.4 0.00077 141-217 / 219-326
phrog_91 nicking at origin of replication DNA, RNA and nucleotide metabolism 92.0 0.025 90-223 / 295-464
phrog_942 replication initiation protein DNA, RNA and nucleotide metabolism 97.4 4.6E-07 107-217 / 60-181

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF07232.10 Putative rep protein (DUF1424) 4.9E-10 117-243 / 91-262
PF05840.12 Bacteriophage replication gene A protein (GPA) 8.7E-09 117-227 / 178-314
PF01446.16 Replication protein 2.2E-08 117-226 / 22-155
PF11726.7 Inovirus Gp2 4.1E-08 108-189 / 4-117
PF14214.5 Helitron helicase-like domain at N-terminus 0.00074 150-172 / 160-182

Annotations of the NCBI proteins of this PHROG


4:hypothetical protein 3:rolling circle DNA replication initiation protein 2:rep protein 1:phave DNA replicase 1:replicative protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0005727 extrachromosomal circular DNA
GO:0003677 DNA binding
GO:0006260 DNA replication

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