phrog_3490 is made of 41 protein sequences and is annotated as "ERCC4-type nuclease"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
176.41 282 180


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_021320_p81 YP_008058529.1 endonuclease NC_021320 Halovirus HRTV-5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p54270 no NCBI prot ID no annotation VI_12213 Halobacteria_gi_448307387_192053_246867 Viruses; unclassified viruses; unclassified DNA viruses; unclassified archaeal dsDNA viruses; Haloviruses.
NC_021335_p71 YP_008060055.1 ERCC4-type nuclease NC_021335 Halovirus HRTV-7 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_020159_p73 YP_007379152.1 hypothetical protein NC_020159 Halovirus HSTV-2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_021321_p83 YP_008058649.1 endonuclease NC_021321 Halovirus HRTV-8 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p39615 no NCBI prot ID no annotation VI_12210 Halobacteria_gi_448303253_72276_133184 Viruses; unclassified viruses; unclassified DNA viruses; unclassified archaeal dsDNA viruses; Haloviruses.
NC_004927_p27 NP_861615.1 hypothetical protein NC_004927 Halovirus HF1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_003345_p32 NP_542526.1 hypothetical protein NC_003345 Halorubrum phage HF2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p7122 no NCBI prot ID no annotation VI_06240 Deltaproteobacteria_gi_544815434 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p69151 no NCBI prot ID no annotation VI_06176 Clostridia_gi_545061504 Viruses.
p376688 no NCBI prot ID no annotation VI_00709 Bacilli_gi_507054341 Viruses.
NC_029069_p103 YP_009223253.1 ERCC4 domain protein NC_029069 Bacillus phage BM5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
JF767210_p41 AEI74574.1 hypothetical protein JF767210 Clostridium phage phiCP9O Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
NC_011318_p49 YP_002265457.1 hypothetical protein NC_011318 Clostridium phage phiCP39-O Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_019506_p47 YP_007005062.1 hypothetical protein NC_019506 Clostridium phage phiCP13O Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p394968 no NCBI prot ID no annotation VI_05071 Bacilli_gi_565802658 Viruses.
p391208 no NCBI prot ID no annotation VI_05482 Bacilli_gi_493984344 Viruses.
NC_019508_p43 YP_007005370.1 hypothetical protein NC_019508 Clostridium phage phiCP34O Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p150392 no NCBI prot ID no annotation VI_00419 Bacilli_gi_423445290 Viruses.
p376256 no NCBI prot ID no annotation VI_05477 Bacilli_gi_493972587 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
MF893271_p29 ATN94293.1 ERCC4 domain protein MF893271 Lysinibacillus phage vB_LspM-01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
p46126 no NCBI prot ID no annotation VI_01209 Clostridia_gi_219684028 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_019496_p41 YP_007004027.1 hypothetical protein NC_019496 Clostridium phage phiCP26F Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_004167_p44 NP_690797.1 hypothetical protein NC_004167 Bacillus phage phi105 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p412069 no NCBI prot ID no annotation VI_05485 Bacilli_gi_493987063 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae; Bacillus phage phBC6A52.
p165519 no NCBI prot ID no annotation VI_04513 Bacilli_gi_485038658 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
p45992 no NCBI prot ID no annotation VI_01297 Clostridia_gi_148245107 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
HM072038_p42 ADF59175.1 hypothetical protein HM072038 Bacillus phage phi105 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p373885 no NCBI prot ID no annotation VI_05481 Bacilli_gi_493978813 Viruses.
p305774 no NCBI prot ID no annotation VI_12302 Negativicutes_gi_421057552 Viruses.
p124031 no NCBI prot ID no annotation VI_05756 Clostridia_gi_153883810 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p99112 no NCBI prot ID no annotation VI_00850 Bacilli_gi_558684320 Viruses.
p271231 no NCBI prot ID no annotation VI_12303 Negativicutes_gi_421063393 Viruses.
p52322 no NCBI prot ID no annotation VI_01311 Clostridia_gi_514231917 Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses.
p215405 no NCBI prot ID no annotation VI_04063 unknown_gi_547862516 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p386883 no NCBI prot ID no annotation VI_01228 Clostridia_gi_547303947 Viruses.
p110552 no NCBI prot ID no annotation VI_01281 Clostridia_gi_160878162_3615270_3659755 Viruses.
p25560 no NCBI prot ID no annotation VI_01160 Clostridia_gi_211596895_66269_137690 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
p75105 no NCBI prot ID no annotation VI_01302 Clostridia_gi_483984722 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p297860 no NCBI prot ID no annotation VI_01264 Clostridia_gi_547902707_39831_65925 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p398327 no NCBI prot ID no annotation VI_01241 Clostridia_gi_547790224 Viruses.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_12649 8 no annotation unknown function 8 0 1000
phrog_9698 11 no annotation unknown function 6 1.01E-26 17.12
phrog_16715 5 no annotation unknown function 5 0 1000
phrog_5494 23 no annotation unknown function 4 1.54E-16 6.93
phrog_18107 5 no annotation unknown function 2 6.51E-12 2.31
phrog_11992 8 no annotation unknown function 2 3.64E-11 1.56
phrog_26824 3 no annotation unknown function 2 6.51E-13 3.31
phrog_26293 3 no annotation unknown function 2 6.51E-13 3.31
phrog_30822 2 no annotation unknown function 2 0 1000
phrog_20437 4 DNA replication initiation DNA, RNA and nucleotide metabolism 2 2.60E-12 2.71

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
no PHROGs similar                                                                           

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF03834.13 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) 9.8E-13 21-174 / 1-114
PF02732.14 ERCC4 domain 4.8E-09 34-172 / 17-186

Annotations of the NCBI proteins of this PHROG


9:hypothetical protein 2:ERCC4 domain protein 2:endonuclease 1:ERCC4-type nuclease 1:protein of an unannotated phage

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K09889 yjgA : ribosome-associated protein no pathways 151 2

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0005634 nucleus
GO:0003684 damaged DNA binding
GO:0004519 endonuclease activity
GO:0004518 nuclease activity
GO:0003677 DNA binding
GO:0006281 DNA repair

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