phrog_3498 is made of 41 protein sequences and is annotated as "NAD-dependent DNA ligase"
Functional category: DNA, RNA and nucleotide metabolism


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
255.66 307 259


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_031933_p126 YP_009323855.1 DNA ligase NC_031933 Salmonella phage 118970_sal2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Epseptimavirus.
KX845404_p101 AOZ65433.1 NDP-dependent DNA ligase subunit B KX845404 Klebsiella phage vB_Kpn_IME260 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Sugarlandvirus; Klebsiella virus IME260.
KT345706_p35 AKY02236.1 NAD-dependent DNA subunit B KT345706 Vibrio phage vB_VorS-PVo5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Ermolyevavirinae; Cetovirus; unclassified Cetovirus.
MF431736_p119 ASU02482.1 DNA ligase MF431736 Bacteriophage T5-like chee130_1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Epseptimavirus; unclassified Epseptimavirus.
KR422353_p110 AKO61511.1 NAD-dependent DNA ligase subunit B KR422353 Escherichia phage APCEc03 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus; Escherichia virus phiAPCEc03.
NC_019919_p114 YP_007237088.1 DNA ligase, phage-associated NC_019919 Yersinia phage phiR201 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Haartmanvirus; Yersinia virus phiR201.
KY883654_p71 ASV43440.1 DNA ligase KY883654 Vibrio phage JSF10 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Ermolyevavirinae; Jesfedecavirus; Vibrio virus JSF10.
MG676225_p68 AVR76104.1 NAD-dependent DNA ligase subunit B MG676225 Aeromonas phage AhSzw-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Shenzhenvirus; Aeromonas virus AhSzw1.
KY114934_p53 ATI99410.1 DNA ligase KY114934 Salmonella phage SP01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus; Salmonella virus SP01.
MH102285_p32 AVQ09869.1 DNA ligase MH102285 Salmonella phage vB_SenS_PHB06 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus; unclassified Tequintavirus.
NC_031902_p131 YP_009320855.1 DNA ligase NC_031902 Salmonella phage 100268_sal2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Epseptimavirus.
NC_027356_p93 YP_009149874.1 NAD-dependent DNA ligase subunit B NC_027356 Escherichia virus DT57C Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus.
MF001363_p59 ASZ77811.1 DNA ligase MF001363 Salmonella phage SH9 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Epseptimavirus; Salmonella virus SH9.
NC_019529_p18 YP_007007841.1 NAD-dependent DNA ligase subunit B NC_019529 Vibrio phage pVp-1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Ermolyevavirinae; Vipunavirus; Vibrio virus pVp1.
NC_027297_p124 YP_009146065.1 NAD-dependent DNA ligase subunit B NC_027297 Salmonella virus Stitch Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Epseptimavirus.
KM979355_p93 AJA41746.1 NAD-dependent DNA ligase small subunit KM979355 Enterobacteria phage DT571/2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus; unclassified Tequintavirus.
NC_028754_p106 YP_009194750.1 NAD-dependent DNA ligase, subunit B NC_028754 Salmonella phage Shivani Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus.
NC_017969_p120 YP_006382419.1 NAD-dependent DNA ligase subunit B NC_017969 Escherichia virus AKFV33 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus.
AY587007_p108 AAX12045.1 DNA ligase AY587007 Escherichia virus T5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus.
MF431735_p114 ASU02326.1 DNA ligase MF431735 Bacteriophage T5-like poul124 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus; unclassified Tequintavirus.
MG649966_p59 AUG85066.1 NAD-dependent DNA ligase subunit B MG649966 Vibrio virus Ceto Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Ermolyevavirinae; Cetovirus.
NC_005859_p117 YP_006945.1 NAD-dependent DNA ligase, subunit B NC_005859 Escherichia virus T5 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus.
NC_028840_p86 YP_009202132.1 DNA ligase NC_028840 Escherichia phage slur09 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus.
NC_031022_p121 YP_009280308.1 DNA ligase NC_031022 Shigella phage SHSML-45 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus; Shigella virus SHSML45.
KY787212_p133 ARM69796.1 NAD-dependent DNA ligase subunit B KY787212 Salmonella phage BSP22A Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Epseptimavirus; unclassified Epseptimavirus.
KY963424_p110 ASD50283.1 NAD-dependent DNA ligase subunit B KY963424 Shigella phage SSP1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus; Shigella virus SSP1.
KY677846_p17 ARB06846.1 NAD-dependent DNA ligase subunit B KY677846 Escherichia phage phiLLS Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus; Escherichia virus phiLLS.
NC_024139_p116 YP_009031737.1 NAD-dependent DNA ligase, subunit B NC_024139 Escherichia phage vB_EcoS_FFH1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus.
NC_015269_p108 YP_004306591.1 NAD-dependent DNA ligase subunit B NC_015269 Salmonella virus SPC35 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus.
MF402939_p64 ASM62924.1 NAD-dependent DNA ligase subunit B MF402939 Escherichia phage OSYSP Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus; Escherichia virus OSYSP.
KY363465_p119 AQT25239.1 DNA ligase subunit B KY363465 Providencia phage vB_PreS_PR1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Priunavirus; Providencia virus PR1.
p285730 no NCBI prot ID no annotation VI_00003 SUP05_AB_751_G10AB_905_6 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
NC_028895_p108 YP_009207573.1 NAD-dependent DNA ligase subunit B NC_028895 Vibrio phage phi 3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Ermolyevavirinae; Jesfedecavirus; Vibrio virus phi3.
MG030347_p37 ATW69920.1 DNA ligase subunit B MG030347 Proteus phage PM135 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Novosibvirus; Proteus virus PM135.
NC_018837_p112 YP_006906364.1 putative NAD-dependent DNA ligase subunit B NC_018837 Pectobacterium phage My1 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Mccorquodalevirinae; Myunavirus; Pectobacterium virus My1.
NC_031042_p49 YP_009283390.1 NDP-dependent DNA ligase subunit B NC_031042 Salmonella phage NR01 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus; Salmonella virus NR01.
MG649967_p56 AUG85258.1 NAD-dependent DNA ligase subunit B MG649967 Vibrio virus Thalassa Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Ermolyevavirinae; Cetovirus.
MF979564_p92 ATS94076.1 putative NAD-dependent DNA ligase subunit B MF979564 Pectobacterium phage DU_PP_V Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Mccorquodalevirinae; Hongcheonvirus; Pectobacterium virus DUPPV.
MG459987_p131 ATW61968.1 NAD-dependent DNA ligase subunit B MG459987 Klebsiella phage Sugarland Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Sugarlandvirus; Klebsiella virus Sugarland.
p39487 no NCBI prot ID no annotation VI_01268 Clostridia_gi_548093166 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p38227 no NCBI prot ID no annotation VI_12291 Mollicutes_gi_359402641_303137_364512 Viruses.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_323 379 endonuclease DNA, RNA and nucleotide metabolism 39 4.58E-113 103.46
phrog_3359 43 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 32 4.85E-128 118.44
phrog_768 186 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism 5 2.48E-14 4.73

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_2561 DNA ligase DNA, RNA and nucleotide metabolism 98.3 9.5E-10 178-256 / 78-152
phrog_3869 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 100.0 1.6E-39 3-258 / 390-656
phrog_3989 no annotation unknown function 95.3 0.00087 175-255 / 204-294

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF16770.4 Regulator of Ty1 transposition protein 107 BRCT domain 3.1E-06 184-263 / 14-106
PF16771.4 Regulator of Ty1 transposition protein 107 BRCT domain 8.2E-07 184-263 / 2-106
PF00533.25 BRCA1 C Terminus (BRCT) domain 2.8E-06 184-260 / 5-102
PF03119.15 NAD-dependent DNA ligase C4 zinc finger domain 3.4E-06 16-40 / 1-26
PF16759.4 DNA ligase 3 BRCT domain 3.3E-06 184-264 / 5-77
PF12738.6 twin BRCT domain 3.3E-05 202-255 / 13-63
PF16589.4 BRCT domain, a BRCA1 C-terminus domain 0.0041 155-181 / 52-78
PF02150.15 RNA polymerases M/15 Kd subunit 0.0029 14-34 / 2-22
PF04606.11 Ogr/Delta-like zinc finger 0.0056 15-42 / 1-37
PF14952.5 Putative treble-clef, zinc-finger, Zn-binding 0.0071 14-40 / 11-34
PF14520.5 Helix-hairpin-helix domain 0.0071 53-98 / 5-57
PF08274.11 PhnA Zinc-Ribbon 0.0075 14-34 / 3-24

Annotations of the NCBI proteins of this PHROG


17:NAD-dependent DNA ligase subunit B 11:DNA ligase 3:NAD-dependent DNA ligase, subunit B 2:DNA ligase subunit B 2:NDP-dependent DNA ligase subunit B 1:NAD-dependent DNA ligase small subunit 1:NAD-dependent DNA subunit B 1:DNA ligase, phage-associated

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
K01972 E6.5.1.2, ligA, ligB : DNA ligase (NAD+) [EC:6.5.1.2] ko03030 DNA replication
ko03410 Base excision repair
ko03420 Nucleotide excision repair
ko03430 Mismatch repair
282 41

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0006351 transcription, DNA-templated
GO:0006260 DNA replication
GO:0006281 DNA repair
GO:0003911 DNA ligase (NAD+) activity

Loading in process