phrog_3512 is made of 41 protein sequences and is annotated as "sigma factor"
Functional category: transcription regulation


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
128.66 176 131


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
NC_018836_p42 YP_006906222.1 hypothetical protein NC_018836 Streptomyces phage phiHau3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae.
MF766044_p45 ATI18667.1 helix-turn-helix DNA binding domain protein MF766044 Streptomyces phage Amethyst Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Arequatrovirus; unclassified Arequatrovirus.
MF541406_p47 ATE85150.1 hypothetical protein MF541406 Streptomyces phage Dattran Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; unclassified Likavirus.
NC_021339_p47 YP_008060280.1 hypothetical protein NC_021339 Streptomyces phage Zemlya Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus.
MG593802_p47 AUG87232.1 helix-turn-helix DNA binding domain protein MG593802 Streptomyces phage Omar Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Arequatrovirus; unclassified Arequatrovirus.
MH001460_p46 AVO22529.1 helix-turn-helix DNA binding domain protein MH001460 Streptomyces phage Paedore Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Arequatrovirus; unclassified Arequatrovirus.
MF766046_p45 ATI18829.1 helix-turn-helix DNA binding domain protein MF766046 Streptomyces phage Diane Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Arequatrovirus; unclassified Arequatrovirus.
MG298964_p46 ATW61320.1 helix-turn-helix DNA binding domain protein MG298964 Streptomyces phage Alsaber Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Camvirus; unclassified Camvirus.
MF766047_p45 ATI18908.1 helix-turn-helix DNA binding domain protein MF766047 Streptomyces phage SqueakyClean Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Arequatrovirus; unclassified Arequatrovirus.
NC_028976_p46 YP_009215424.1 hypothetical protein NC_028976 Streptomyces phage Izzy Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus.
NC_021304_p46 YP_008051448.1 hypothetical protein NC_021304 Streptomyces phage Sujidade Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus.
KX507344_p46 AOQ27021.1 helix-turn-helix DNA binding domain protein KX507344 Streptomyces phage Godpower Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; unclassified Likavirus.
KX507345_p48 AOQ27094.1 helix-turn-helix DNA binding domain protein KX507345 Streptomyces phage Brataylor Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; unclassified Likavirus.
KX507343_p46 AOQ26942.1 helix-turn-helix DNA binding domain protein KX507343 Streptomyces phage Lorelei Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; unclassified Likavirus.
MF541405_p46 ATE85072.1 helix-turn-helix DNA binding domain protein MF541405 Streptomyces phage Celeste Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; unclassified Likavirus.
NC_028904_p45 YP_009208323.1 hypothetical protein NC_028904 Streptomyces phage Amela Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Camvirus.
NC_019414_p46 YP_006990161.1 hypothetical protein NC_019414 Streptomyces phage R4 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Arequatrovirus.
MF766045_p46 ATI18747.1 helix-turn-helix DNA binding domain protein MF766045 Streptomyces phage Daudau Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Arequatrovirus; unclassified Arequatrovirus.
NC_021298_p45 YP_008050902.1 hypothetical protein NC_021298 Streptomyces phage Lika Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus.
KT124227_p45 AKY03427.1 transcriptional regulator KT124227 Streptomyces phage Aaronocolus Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; Streptomyces virus Aaronocolus.
NC_031078_p47 YP_009287831.1 transcriptional regulator NC_031078 Streptomyces phage Nanodon Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; unclassified Likavirus.
MG757163_p46 AVE00427.1 helix-turn-helix DNA binding domain protein MG757163 Streptomyces phage OzzyJ Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; unclassified Likavirus.
MF541407_p45 ATE85225.1 helix-turn-helix DNA binding domain protein MF541407 Streptomyces phage Esperer Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; unclassified Likavirus.
KT186229_p45 AKY03875.1 hypothetical protein KT186229 Streptomyces phage Verse Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Camvirus; Streptomyces virus Amela; Streptomyces phage Amela.
MF766048_p47 ATI18987.1 helix-turn-helix DNA binding domain protein MF766048 Streptomyces phage Tefunt Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Arequatrovirus; unclassified Arequatrovirus.
MF541409_p46 ATE85376.1 helix-turn-helix DNA binding domain protein MF541409 Streptomyces phage Oliynyk Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; unclassified Likavirus.
KX815338_p46 APC43286.1 hypothetical protein KX815338 Streptomyces phage Joe Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Camvirus; unclassified Camvirus.
JX262376_p45 AFO10911.1 hypothetical protein JX262376 Streptomyces phage phiELB20 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Arequatrovirus; Streptomyces virus ELB20.
NC_028827_p47 YP_009200987.1 transcriptional regulator NC_028827 Streptomyces phage Lannister Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus.
KT124228_p47 AKY03502.1 transcriptional regulator KT124228 Streptomyces phage Danzina Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; Streptomyces virus Danzina.
p250583 no NCBI prot ID no annotation VI_05056 Bacilli_gi_483992683 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
NC_028930_p83 YP_009210603.1 SigK-like protein NC_028930 Paenibacillus phage Tripp Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Trippvirus; Paenibacillus virus Tripp.
p55641 no NCBI prot ID no annotation VI_05242 Bacilli_gi_458798330_349456_403365 Viruses.
p29427 no NCBI prot ID no annotation VI_04841 Bacilli_gi_484078956 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p202063 no NCBI prot ID no annotation VI_00407 Bacilli_gi_423364641 Viruses.
p32354 no NCBI prot ID no annotation VI_00731 Bacilli_gi_163937865 Viruses.
p36875 no NCBI prot ID no annotation VI_00612 Bacilli_gi_505484066 Viruses.
NC_023007_p252 YP_008873494.1 hypothetical protein NC_023007 Bacillus phage vB_BanS-Tsamsa Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
KT070867_p237 AKQ08552.1 hypothetical protein KT070867 Bacillus phage PBC2 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
JX889246_p43 AFV51363.1 hypothetical protein JX889246 Streptomyces phage phiCAM Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Camvirus; Streptomyces virus phiCAM.
KY472224_p31 AQT27666.1 hypothetical protein KY472224 Enterococcus phage EF-P10 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Saphexavirus; unclassified Saphexavirus.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_1340 111 no annotation unknown function 31 2.64E-106 96.7
phrog_4123 34 no annotation unknown function 30 4.14E-126 116.5
phrog_13088 8 no annotation unknown function 7 1.97E-33 23.83

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_11138 no annotation unknown function 97.6 1.1E-07 55-114 / 85-139
phrog_11302 no annotation unknown function 90.1 0.062 66-106 / 5-44
phrog_11420 DNA binding protein DNA, RNA and nucleotide metabolism 94.3 0.0039 67-107 / 10-50
phrog_1190 RNA polymerase sigma factor transcription regulation 97.4 3.5E-07 66-116 / 137-187
phrog_12540 no annotation unknown function 91.9 0.028 67-104 / 14-51
phrog_1373 transcriptional regulator transcription regulation 92.9 0.014 56-104 / 20-66
phrog_13787 no annotation unknown function 93.7 0.0074 65-116 / 120-170
phrog_14385 no annotation unknown function 98.2 1.6E-09 38-113 / 134-209
phrog_1558 no annotation unknown function 94.9 0.0016 69-118 / 104-153
phrog_1729 no annotation unknown function 94.5 0.0032 33-121 / 29-123
phrog_1740 RNA polymerase sigma factor transcription regulation 97.9 1.6E-08 48-117 / 113-177
phrog_191 CII-like transcriptional activator transcription regulation 90.2 0.06 82-105 / 27-50
phrog_20467 HNH endonuclease DNA, RNA and nucleotide metabolism 95.6 0.00044 66-105 / 54-93
phrog_2328 transcriptional repressor transcription regulation 92.5 0.019 66-124 / 13-70
phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism 92.5 0.019 75-109 / 30-64
phrog_24579 terminase small subunit head and packaging 90.3 0.058 64-103 / 11-52
phrog_248 transcriptional activator transcription regulation 95.2 0.0011 9-121 / 18-139
phrog_2538 terminase small subunit head and packaging 93.8 0.0071 66-103 / 3-40
phrog_26230 no annotation unknown function 92.9 0.014 57-113 / 55-111
phrog_27555 transcriptional regulator transcription regulation 93.3 0.011 66-111 / 129-175
phrog_3282 sigma factor transcription regulation 95.5 0.00055 64-113 / 15-63
phrog_3502 no annotation unknown function 92.8 0.016 66-107 / 3-51
phrog_351 RNA polymerase sigma factor transcription regulation 97.9 1.6E-08 56-119 / 166-231
phrog_36 transcriptional regulator transcription regulation 96.8 1.1E-05 50-116 / 74-139
phrog_3 transcriptional repressor transcription regulation 91.8 0.029 80-106 / 14-39
phrog_4646 transposase integration and excision 94.8 0.002 66-107 / 6-47
phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism 95.3 0.0009 62-107 / 59-104
phrog_5229 no annotation unknown function 92.1 0.025 66-126 / 68-116
phrog_5536 no annotation unknown function 93.6 0.0085 64-104 / 3-43
phrog_5767 sigma factor transcription regulation 96.6 2.2E-05 41-117 / 269-341
phrog_57 terminase small subunit head and packaging 90.2 0.06 83-110 / 3-30
phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 94.6 0.0027 66-106 / 52-92
phrog_66 excisionase and transcriptional regulator integration and excision 93.6 0.0081 83-107 / 10-34
phrog_6831 transcriptional regulator transcription regulation 90.9 0.045 81-104 / 14-37
phrog_6836 no annotation unknown function 92.2 0.023 48-117 / 62-128
phrog_725 CII-like regulator transcription regulation 91.1 0.04 71-114 / 16-60
phrog_7344 terminase small subunit head and packaging 95.8 0.00027 66-102 / 10-46
phrog_79 anti-termination protein Q-like transcription regulation 91.3 0.037 69-116 / 65-112
phrog_9217 transcriptional regulator transcription regulation 91.6 0.031 77-117 / 47-88
phrog_9759 DNA binding protein DNA, RNA and nucleotide metabolism 93.2 0.011 71-105 / 8-41

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF07638.10 ECF sigma factor 9E-07 81-129 / 133-181
PF05331.10 Protein of unknown function (DUF742) 6E-06 82-126 / 39-82
PF03333.12 Adhesin biosynthesis transcription regulatory protein 2.1E-05 81-129 / 39-87
PF07374.10 Protein of unknown function (DUF1492) 3.6E-05 81-125 / 54-99
PF06530.11 Phage antitermination protein Q 4.1E-05 83-132 / 65-114
PF04545.15 Sigma-70, region 4 4.3E-05 82-126 / 5-53
PF04297.13 Putative helix-turn-helix protein, YlxM / p13 like 0.0001 82-132 / 18-68
PF02001.15 Protein of unknown function DUF134 0.00014 81-132 / 31-82
PF05263.10 Protein of unknown function (DUF722) 0.00033 81-126 / 81-133
PF16264.4 SatD family (SatD) 0.00059 81-129 / 150-203
PF08281.11 Sigma-70, region 4 0.00069 82-123 / 11-52
PF16509.4 TrfB plasmid transcriptional repressor 0.00079 82-129 / 16-63
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.0014 96-128 / 18-50
PF00196.18 Bacterial regulatory proteins, luxR family 0.0016 83-127 / 4-47
PF04967.11 HTH DNA binding domain 0.0023 98-125 / 24-51
PF11242.7 Protein of unknown function (DUF2774) 0.0025 87-127 / 5-44
PF07750.10 GcrA cell cycle regulator 0.0028 94-124 / 15-46
PF10975.7 Protein of unknown function (DUF2802) 0.0033 85-118 / 32-64
PF10654.8 Protein of unknown function (DUF2481) 0.0056 94-130 / 77-113
PF08280.10 M protein trans-acting positive regulator (MGA) HTH domain 0.0062 97-128 / 20-51
PF12759.6 InsA C-terminal domain 0.0069 94-119 / 18-43
PF04218.12 CENP-B N-terminal DNA-binding domain 0.0095 98-125 / 24-51
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 0.01 94-122 / 10-38

Annotations of the NCBI proteins of this PHROG


15:helix-turn-helix DNA binding domain protein 12:hypothetical protein 4:transcriptional regulator 3:protein of an unannotated phage 1:SigK-like protein

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0005524 ATP binding
GO:0003700 DNA binding transcription factor activity
GO:0003677 DNA binding
GO:0006355 regulation of transcription, DNA-templated
GO:0006352 DNA-templated transcription, initiation
GO:0060567 negative regulation of DNA-templated transcription, termination
GO:0019069 viral capsid assembly
GO:0016987 sigma factor activity

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