ID |
Definition |
Evalue |
posQ/posS |
PF10007.8 |
Uncharacterized protein conserved in archaea (DUF2250) |
6.1E-07 |
34-69 / 21-56 |
PF11313.7 |
Protein of unknown function (DUF3116) |
6.2E-07 |
35-84 / 20-81 |
PF09114.9 |
Transcription factor MotA, activation domain |
8.5E-07 |
34-86 / 29-82 |
PF02319.19 |
E2F/DP family winged-helix DNA-binding domain |
2.5E-06 |
34-68 / 22-56 |
PF14277.5 |
Domain of unknown function (DUF4364) |
3.6E-06 |
34-84 / 14-72 |
PF12793.6 |
Sugar transport-related sRNA regulator N-term |
7.9E-06 |
34-82 / 17-72 |
PF07381.10 |
Winged helix DNA-binding domain (DUF1495) |
8.1E-06 |
34-68 / 23-67 |
PF14947.5 |
Winged helix-turn-helix |
8.7E-06 |
34-82 / 15-68 |
PF04492.12 |
Bacteriophage replication protein O |
9.4E-06 |
35-68 / 49-82 |
PF14557.5 |
Putative AphA-like transcriptional regulator |
1.1E-05 |
34-84 / 24-89 |
PF16221.4 |
winged helix-turn-helix |
1.1E-05 |
34-67 / 45-78 |
PF10711.8 |
Hypothetical protein (DUF2513) |
1.2E-05 |
35-85 / 18-85 |
PF05491.12 |
Holliday junction DNA helicase ruvB C-terminus |
1.6E-05 |
35-81 / 25-72 |
PF01090.18 |
Ribosomal protein S19e |
1.7E-05 |
34-84 / 64-134 |
PF09639.9 |
YjcQ protein |
2.2E-05 |
35-84 / 16-82 |
PF09824.8 |
ArsR transcriptional regulator |
2.3E-05 |
8-68 / 6-61 |
PF06969.15 |
HemN C-terminal domain |
2.6E-05 |
34-78 / 19-64 |
PF09012.9 |
FeoC like transcriptional regulator |
3.1E-05 |
34-68 / 13-47 |
PF05732.10 |
Firmicute plasmid replication protein (RepL) |
3.3E-05 |
35-76 / 75-117 |
PF14394.5 |
Domain of unknown function (DUF4423) |
3.5E-05 |
36-69 / 37-72 |
PF00126.26 |
Bacterial regulatory helix-turn-helix protein, lysR family |
3.7E-05 |
36-75 / 12-54 |
PF07106.12 |
Tat binding protein 1(TBP-1)-interacting protein (TBPIP) |
4.1E-05 |
33-68 / 14-51 |
PF02334.15 |
Replication terminator protein |
4.2E-05 |
34-85 / 30-103 |
PF09857.8 |
Putative toxin of bacterial toxin-antitoxin pair |
4.2E-05 |
38-84 / 29-79 |
PF09202.10 |
Rio2, N-terminal |
4.8E-05 |
35-81 / 24-73 |
PF08221.10 |
RNA polymerase III subunit RPC82 helix-turn-helix domain |
4.8E-05 |
34-68 / 26-60 |
PF08222.10 |
CodY helix-turn-helix domain |
5.5E-05 |
35-68 / 4-37 |
PF13601.5 |
Winged helix DNA-binding domain |
5.6E-05 |
34-68 / 13-47 |
PF16864.4 |
Dimerisation domain |
5.6E-05 |
34-81 / 31-78 |
PF05584.10 |
Sulfolobus plasmid regulatory protein |
5.6E-05 |
34-68 / 17-51 |
PF01638.16 |
HxlR-like helix-turn-helix |
6.7E-05 |
34-81 / 18-73 |
PF03551.13 |
Transcriptional regulator PadR-like family |
7.2E-05 |
34-68 / 13-49 |
PF01726.15 |
LexA DNA binding domain |
7.5E-05 |
35-68 / 25-59 |
PF16365.4 |
Ethanolamine utilization protein EutK C-terminus |
9E-05 |
34-68 / 16-50 |
PF03965.15 |
Penicillinase repressor |
0.00011 |
36-78 / 19-70 |
PF08461.9 |
Ribonuclease R winged-helix domain |
0.00012 |
35-79 / 12-62 |
PF02002.16 |
TFIIE alpha subunit |
0.00012 |
34-68 / 25-59 |
PF02082.19 |
Transcriptional regulator |
0.00013 |
36-68 / 25-57 |
PF04182.11 |
B-block binding subunit of TFIIIC |
0.00015 |
34-68 / 17-51 |
PF13545.5 |
Crp-like helix-turn-helix domain |
0.00015 |
35-73 / 27-65 |
PF08784.10 |
Replication protein A C terminal |
0.00016 |
34-68 / 57-94 |
PF07848.11 |
PaaX-like protein |
0.00017 |
34-68 / 19-56 |
PF03444.14 |
Winged helix-turn-helix transcription repressor, HrcA DNA-binding |
0.00018 |
35-80 / 24-72 |
PF09821.8 |
C-terminal AAA-associated domain |
0.00018 |
40-83 / 2-45 |
PF04079.15 |
Segregation and condensation complex subunit ScpB |
0.00018 |
34-81 / 96-148 |
PF12840.6 |
Helix-turn-helix domain |
0.00019 |
34-68 / 22-53 |
PF04358.12 |
DsrC like protein |
0.00022 |
34-68 / 57-94 |
PF02295.16 |
Adenosine deaminase z-alpha domain |
0.00024 |
35-68 / 18-52 |
PF09339.9 |
IclR helix-turn-helix domain |
0.00028 |
36-67 / 19-50 |
PF06163.10 |
Bacterial protein of unknown function (DUF977) |
0.00029 |
34-68 / 25-59 |
PF09904.8 |
Winged helix-turn helix |
0.00031 |
34-67 / 20-53 |
PF15977.4 |
Winged helix-turn-helix DNA binding |
0.00035 |
35-68 / 23-56 |
PF13463.5 |
Winged helix DNA-binding domain |
0.00036 |
34-68 / 16-50 |
PF03428.12 |
Replication protein C N-terminal domain |
0.00038 |
36-68 / 71-104 |
PF08220.11 |
DeoR-like helix-turn-helix domain |
0.0004 |
34-72 / 13-51 |
PF01325.18 |
Iron dependent repressor, N-terminal DNA binding domain |
0.00045 |
34-68 / 20-54 |
PF12802.6 |
MarR family |
0.00047 |
36-68 / 22-54 |
PF05158.11 |
RNA polymerase Rpc34 subunit |
0.00057 |
34-68 / 107-141 |
PF01475.18 |
Ferric uptake regulator family |
0.00063 |
34-68 / 21-60 |
PF09182.9 |
Bacterial purine repressor, N-terminal |
0.00068 |
34-67 / 19-57 |
PF01022.19 |
Bacterial regulatory protein, arsR family |
0.0007 |
35-65 / 16-46 |
PF13412.5 |
Winged helix-turn-helix DNA-binding |
0.00071 |
35-65 / 17-47 |
PF00392.20 |
Bacterial regulatory proteins, gntR family |
0.00087 |
35-68 / 23-57 |
PF13730.5 |
Helix-turn-helix domain |
0.001 |
46-65 / 33-52 |
PF01978.18 |
Sugar-specific transcriptional regulator TrmB |
0.001 |
34-68 / 21-55 |
PF14502.5 |
Helix-turn-helix domain |
0.001 |
35-68 / 6-39 |
PF14338.5 |
Mrr N-terminal domain |
0.0012 |
46-82 / 48-85 |
PF05331.10 |
Protein of unknown function (DUF742) |
0.0013 |
34-68 / 52-86 |
PF08535.9 |
KorB domain |
0.0013 |
35-68 / 3-36 |
PF01047.21 |
MarR family |
0.0015 |
35-68 / 17-50 |
PF07900.10 |
Protein of unknown function (DUF1670) |
0.0018 |
34-69 / 94-129 |
PF00325.19 |
Bacterial regulatory proteins, crp family |
0.002 |
37-65 / 4-32 |
PF08279.11 |
HTH domain |
0.0027 |
34-63 / 14-43 |
PF03297.14 |
S25 ribosomal protein |
0.0037 |
35-68 / 56-89 |
PF09681.9 |
N-terminal phage replisome organiser (Phage_rep_org_N) |
0.0037 |
36-68 / 54-86 |
PF04703.11 |
FaeA-like protein |
0.0043 |
34-68 / 13-47 |
PF01418.16 |
Helix-turn-helix domain, rpiR family |
0.0045 |
35-68 / 34-67 |
PF06970.10 |
Replication initiator protein A (RepA) N-terminus |
0.005 |
37-59 / 53-75 |
PF05043.12 |
Mga helix-turn-helix domain |
0.0057 |
34-62 / 29-57 |
PF10771.8 |
Winged helix-turn-helix domain (DUF2582) |
0.0067 |
25-68 / 13-55 |
PF17443.1 |
Uncharacterized protein pXO2-72 |
0.0077 |
35-56 / 8-29 |
PF06056.11 |
Putative ATPase subunit of terminase (gpP-like) |
0.008 |
34-65 / 12-43 |