Average length of proteins | Number of columns in the MSA | Number of conserved columns in the MSA |
---|---|---|
127 | 127 | 127 |
PHROG prot ID | NCBI prot ID | NCBI prot annotation | Virus ID (click to view) | Virus name | Virus taxonomy |
---|---|---|---|---|---|
p62344 | no NCBI prot ID | no annotation | VI_01138 | Clostridia_gi_545644210_13585_64916 | Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses. |
p49468 | no NCBI prot ID | no annotation | VI_01135 | Clostridia_gi_545639314_6496_63820 | Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses. |
PHROG | #Prot | Annotation | Category | #Neighbors | Probability | Score |
---|---|---|---|---|---|---|
phrog_33611 | 2 | no annotation | unknown function | 2 | 0 | 1000 |
phrog_25485 | 3 | no annotation | unknown function | 2 | 3.29E-17 | 7.6 |
PHROG | Annotation | Category | Probability | Evalue | posQ/posS |
---|---|---|---|---|---|
phrog_24127 | no annotation | unknown function | 94.9 | 0.0016 | 71-121 / 167-215 |
phrog_351 | RNA polymerase sigma factor | transcription regulation | 96.7 | 1.4E-05 | 23-120 / 18-157 |
ID | Definition | Evalue | posQ/posS |
---|---|---|---|
PF07638.10 | ECF sigma factor | 5.7E-10 | 6-95 / 2-95 |
PF04542.13 | Sigma-70 region 2 | 3.4E-08 | 33-93 / 6-65 |
PF12645.6 | Helix-turn-helix domain | 1.5E-07 | 11-64 / 3-62 |
ID | Name : Definition | Pathways | BestScore | #Hits |
---|---|---|---|---|
K03088 | SIG3.2, rpoE : RNA polymerase sigma-70 factor, ECF subfamily | no pathways | 81 | 2 |
ID | Definition |
---|---|
GO:0006352 | DNA-templated transcription, initiation |
GO:0003700 | DNA binding transcription factor activity |
GO:0006355 | regulation of transcription, DNA-templated |