phrog_3746 is made of 38 protein sequences and is annotated as "terminase large subunit"
Functional category: head and packaging


Average length of proteins Number of columns in the MSA Number of conserved columns in the MSA
260.29 539 248


List of all proteins of this PHROG

PHROG prot ID NCBI prot ID NCBI prot annotation Virus ID (click to view) Virus name Virus taxonomy
p266853 no NCBI prot ID no annotation VI_03598 Gammaproteobacteria_gi_383187966_1610200_1640617 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p320655 no NCBI prot ID no annotation VI_11133 Gammaproteobacteria_gi_487676924_0_23341 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p339215 no NCBI prot ID no annotation VI_10824 Gammaproteobacteria_gi_487385722 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Peduovirus.
p330852 no NCBI prot ID no annotation VI_01885 Gammaproteobacteria_gi_422778688_0_22118 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Peduovirus.
p351009 no NCBI prot ID no annotation VI_10833 Gammaproteobacteria_gi_487389548 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Peduovirus.
p300293 no NCBI prot ID no annotation VI_11420 Gammaproteobacteria_gi_544881198_0_25852 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p276649 no NCBI prot ID no annotation VI_10003 Gammaproteobacteria_gi_555238366 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p297259 no NCBI prot ID no annotation VI_08987 Gammaproteobacteria_gi_421449036_0_26172 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p397078 no NCBI prot ID no annotation VI_09992 Gammaproteobacteria_gi_555236675 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p377744 no NCBI prot ID no annotation VI_10989 Gammaproteobacteria_gi_487563143 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p436472 no NCBI prot ID no annotation VI_10879 Gammaproteobacteria_gi_514076434 Viruses.
p265281 no NCBI prot ID no annotation VI_10020 Gammaproteobacteria_gi_555241967_2781_33329 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Felsduovirus; Salmonella virus Fels2.
p289597 no NCBI prot ID no annotation VI_09951 Gammaproteobacteria_gi_554956026 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p303085 no NCBI prot ID no annotation VI_10071 Gammaproteobacteria_gi_555264796_7675_33194 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p272249 no NCBI prot ID no annotation VI_02645 Gammaproteobacteria_gi_505742164_1177247_1206952 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_009542_p20 YP_001285644.1 truncated terminase ATPase subunit NC_009542 Aeromonas virus phiO18P Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Bielevirus.
p366568 no NCBI prot ID no annotation VI_12045 Gammaproteobacteria_gi_483772541 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p151366 no NCBI prot ID no annotation VI_03827 Gammaproteobacteria_gi_51594359_2097182_2137889 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p23546 no NCBI prot ID no annotation VI_06451 Gammaproteobacteria_gi_156718209 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p122532 no NCBI prot ID no annotation VI_03020 Gammaproteobacteria_gi_170022262_2543502_2586587 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Peduovirus.
p260600 no NCBI prot ID no annotation VI_07460 Gammaproteobacteria_gi_418242445_17149_48075 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_001317_p2 NP_052250.1 W protein NC_001317 Escherichia virus 186 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Eganvirus.
MF276773_p2 ASD51186.1 terminase, ATPase subunit MF276773 Erwinia phage EtG Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Eganvirus; Erwinia virus EtG.
p266971 no NCBI prot ID no annotation VI_11353 Gammaproteobacteria_gi_560997353_13101_43513 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p255281 no NCBI prot ID no annotation VI_03918 Gammaproteobacteria_gi_565128168_86265_117651 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p260523 no NCBI prot ID no annotation VI_03566 Gammaproteobacteria_gi_526218030_4104421_4135352 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p323176 no NCBI prot ID no annotation VI_11840 Gammaproteobacteria_gi_553805909_134495_157552 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p279385 no NCBI prot ID no annotation VI_03497 Gammaproteobacteria_gi_470461182_3708160_3736834 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p10440 no NCBI prot ID no annotation VI_03811 Gammaproteobacteria_gi_452119554_4094371_4184893 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p262020 no NCBI prot ID no annotation VI_06432 Gammaproteobacteria_gi_149113253_47261_78043 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p266936 no NCBI prot ID no annotation VI_09980 Gammaproteobacteria_gi_555230398_37496_67908 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
NC_005340_p2 NP_958057.1 gp2 NC_005340 Salmonella virus PsP3 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Eganvirus.
p25889 no NCBI prot ID no annotation VI_11951 Gammaproteobacteria_gi_565625633 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p429303 no NCBI prot ID no annotation VI_07636 Gammaproteobacteria_gi_418828274 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p266353 no NCBI prot ID no annotation VI_09923 Gammaproteobacteria_gi_554685601_8820_39275 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p336315 no NCBI prot ID no annotation VI_12043 Gammaproteobacteria_gi_483771549 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
p416880 no NCBI prot ID no annotation VI_06307 Epsilonproteobacteria_gi_544651181 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales.
p389637 no NCBI prot ID no annotation VI_09144 Gammaproteobacteria_gi_421680545 Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.

PHROGs colocalized to this PHROG

PHROG #Prot Annotation Category #Neighbors Probability Score
phrog_2 5795 terminase large subunit head and packaging 29 2.41E-47 37.74
phrog_68 1119 portal protein head and packaging 28 5.04E-66 56.42
phrog_5909 21 terminase large subunit head and packaging 5 8.04E-21 11.22

PHROGs similar to this PHROG

PHROG Annotation Category Probability Evalue posQ/posS
phrog_22646 no annotation unknown function 96.7 1.7E-05 23-179 / 38-203
phrog_2 terminase large subunit head and packaging 95.9 0.00023 23-165 / 10-148

PFAMs similar to this PHROG

ID Definition Evalue posQ/posS
PF04466.12 Phage terminase large subunit 2.9E-15 160-367 / 2-202
PF03354.14 Phage Terminase 2E-13 159-300 / 23-171
PF05876.11 Phage terminase large subunit (GpA) 6.5E-12 142-301 / 21-196
PF03237.14 Terminase-like family 2.9E-11 163-370 / 1-209
PF02500.14 Probable DNA packing protein, N-terminus 7.9E-09 160-249 / 176-272
PF07652.13 Flavivirus DEAD domain 6.3E-07 159-209 / 4-54
PF02562.15 PhoH-like protein 7.9E-07 144-202 / 4-63
PF04851.14 Type III restriction enzyme, res subunit 2.9E-06 144-207 / 3-70
PF07141.10 Putative bacteriophage terminase small subunit 1E-05 3-50 / 6-57
PF07517.13 SecA DEAD-like domain 1.3E-05 143-212 / 89-155
PF09607.9 Brinker DNA-binding domain 1.7E-05 5-51 / 2-52
PF13011.5 leucine-zipper of insertion element IS481 4.3E-05 3-52 / 2-52
PF00292.17 'Paired box' domain 7.6E-05 5-52 / 14-61
PF12759.6 InsA C-terminal domain 8.8E-05 7-48 / 4-45
PF06056.11 Putative ATPase subunit of terminase (gpP-like) 9.8E-05 13-52 / 2-41
PF08822.10 Protein of unknown function (DUF1804) 0.0001 8-52 / 2-47
PF13086.5 AAA domain 0.00013 145-208 / 2-67
PF01710.15 Transposase 0.00016 8-50 / 2-44
PF06627.10 Protein of unknown function (DUF1153) 0.0002 5-52 / 26-74
PF00176.22 SNF2 family N-terminal domain 0.00022 160-180 / 18-38
PF10668.8 Phage terminase small subunit 0.00023 7-52 / 3-50
PF00270.28 DEAD/DEAH box helicase 0.00023 147-210 / 2-67
PF07750.10 GcrA cell cycle regulator 0.00025 8-50 / 2-45
PF01527.19 Transposase 0.00036 7-52 / 3-48
PF13542.5 Helix-turn-helix domain of transposase family ISL3 0.00036 5-48 / 8-50
PF16087.4 Domain of unknown function (DUF4817) 0.00036 11-52 / 2-52
PF14617.5 U3-containing 90S pre-ribosomal complex subunit 0.00043 142-212 / 62-142
PF16677.4 DNA-packaging protein gp3 0.00046 6-48 / 3-53
PF06862.11 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 0.00054 146-213 / 1-111
PF05344.10 Domain of Unknown Function (DUF746) 0.00054 16-52 / 3-40
PF13309.5 HTH domain 0.00079 7-46 / 18-63
PF02796.14 Helix-turn-helix domain of resolvase 0.00082 9-47 / 6-44
PF10654.8 Protein of unknown function (DUF2481) 0.00082 11-48 / 67-104
PF04218.12 CENP-B N-terminal DNA-binding domain 0.00094 6-49 / 4-48
PF12340.7 Protein of unknown function (DUF3638) 0.0012 141-210 / 19-87
PF06322.10 Phage NinH protein 0.0016 14-51 / 5-43
PF00580.20 UvrD/REP helicase N-terminal domain 0.0019 146-210 / 2-67
PF13936.5 Helix-turn-helix domain 0.002 9-47 / 5-43
PF11427.7 Tc3 transposase 0.0026 9-50 / 5-46
PF04936.11 Protein of unknown function (DUF658) 0.0026 17-49 / 2-39
PF05894.11 Podovirus DNA encapsidation protein (Gp16) 0.0033 160-201 / 18-59
PF13518.5 Helix-turn-helix domain 0.0041 15-52 / 3-39
PF05225.15 helix-turn-helix, Psq domain 0.0047 14-49 / 5-42
PF03333.12 Adhesin biosynthesis transcription regulatory protein 0.0047 10-49 / 41-80
PF14493.5 Helix-turn-helix domain 0.0048 16-52 / 4-40
PF13613.5 Helix-turn-helix of DDE superfamily endonuclease 0.0049 10-49 / 4-44
PF13872.5 P-loop containing NTP hydrolase pore-1 0.0051 143-208 / 34-109
PF12824.6 Mitochondrial ribosomal protein subunit L20 0.0053 6-48 / 86-131
PF08765.10 Mor transcription activator family 0.0062 17-50 / 66-98
PF04552.12 Sigma-54, DNA binding domain 0.0068 8-50 / 30-74
PF02954.18 Bacterial regulatory protein, Fis family 0.0073 23-47 / 15-39
PF13412.5 Winged helix-turn-helix DNA-binding 0.0079 23-51 / 16-44
PF13022.5 Helix-turn-helix of insertion element transposase 0.0082 6-46 / 4-47

Annotations of the NCBI proteins of this PHROG


1:W protein 1:hypothetical protein 1:terminase, ATPase subunit 1:truncated terminase ATPase subunit

KEGG orthologous groups similar to this PHROG

ID Name : Definition Pathways BestScore #Hits
no KEGG group similar to this PHROG                                                            

GO terms in Uniprot proteins similar to this PHROG

ID Definition
GO:0019069 viral capsid assembly
GO:0003676 nucleic acid binding
GO:0006355 regulation of transcription, DNA-templated
GO:0043565 sequence-specific DNA binding
GO:0017038 protein import
GO:0016020 membrane
GO:0004803 transposase activity
GO:0006323 DNA packaging
GO:0005524 ATP binding
GO:0005634 nucleus
GO:0016787 hydrolase activity
GO:0008026 ATP-dependent helicase activity
GO:0006310 DNA recombination
GO:0003677 DNA binding
GO:0000150 recombinase activity
GO:0006313 transposition, DNA-mediated

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